BAC Information

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BAC

Clone NameB6Ng01-327L11
Chromosome7 (Build37)
Map Location 114,475,759 - 114,476,855
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik
Downstream geneSyt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327L11.bB6Ng01-327L11.g
ACCGA115184GA115185
length3471,098
definitionB6Ng01-327L11.b B6Ng01-327L11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acaacagagtgaattgaatggctgagaaacacttaaagaattgttcaagg
tcctcagtgatcagggaaatgcaacaatggacagatgccgcacaccccta
tggctgaattagaaaaaggctggaaaaagctgaggaggagggtgacccca
taggaagatcagcagtctcaactaacccagacccctaagatctctgagcc
accaaacaggcaacatatactagctgatctgaggcccacaacacctatac
ggcagaggactgcctgatccagcctcagtgagagatgtgcctaacctttt
agagacttgaggcccaggcagtagggagggattgtggggtggggtag
gaattccaggtatgactcctacatgtatactgtacagtagggctgggaat
cttttatttacaagtgtcaagcaaggagcacccaatcaactgcatctgag
cacagagtctgggcagggacatcagctctgcagagaatcaggaagagctg
acctgctgttgctgaaatccagtgagaaaagaactggcaatcactgcagg
cagcaaaactcagcaaagccgaaggagcaacaggcacaagagagttggtg
ctggggtttaggagacgatgacagtttaattgagataatgtttgcagagc
ttccgaaatctacgagagttgtgtgtgacctccatgagcatgaaatcatc
ttcctgaagtaattaagtcagagaaagtctgtgcatcttgcagaaaagtg
agaatataaaatacaaagatgtagcccttaaaaacagactgttctaattt
cctggagaatacttattgagctccagcatattccacggagtggatacatt
agcatgaatatatccattccattattagtaaaaatatattagttccattt
cactgttatctgtaacatctttgtatacgcactcatttatattaaacatt
attatatgttaatgggaaagacacagttgttaaattctccttctcctgtt
gtgtataaatgtgtttatgtagtgtgtgcatgtacacgcatatacatggt
tatgcacatgtatgcatgtaggggccagagttcacatctgtattctctta
tgactctcaatctttttatttcatttcatctttcattagatctggggatc
ctaattcatctaggctggctggctaacatgactgagggctctgatggtct
caggcctcagccacagcactgtggctacagatgcatgggtttgtttgttt
gtttgtttgtttgttttttgttttggagacagggtttctctgtgtagccc
tggctaccctggaaactcactctgtagacaggctgggtctgactcagaaa
tccacctgccttctgctcgagtgctgggaattaaggcgtgccccaccacg
tccgggcagatgcaatgttaacacatgcctcaactcttatggtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_114475759_114476855
seq2: B6Ng01-327L11.g_65_1162 (reverse)

seq1  CACCCA-CATAAGAAGCTGA-GCATGTGGTAACA-TGCATCTG-CCGGGC  46
      |||||| |||||| || ||| ||||||| ||||| |||||||| |||| |
seq2  CACCCACCATAAG-AGTTGAGGCATGTGTTAACATTGCATCTGCCCGGAC  49

seq1  GTGGTGGGGCACGCCTTTAATCCCAGCACTCCGGAGGCAG-AGGCAGGTG  95
      ||||||||||||||||| | |||||||||||  || |||| |||||||||
seq2  GTGGTGGGGCACGCCTTAATTCCCAGCACTC--GA-GCAGAAGGCAGGTG  96

seq1  GATTTCTGAGTTCAAGACCAGCCTGGTCTACAGAGTGAG-TTCCAGGGTA  144
      |||||||||| |||   ||||||| |||||||||||||| ||||||||||
seq2  GATTTCTGAG-TCAGACCCAGCCT-GTCTACAGAGTGAGTTTCCAGGGTA  144

seq1  GCCAGGGCTACACAGAGAAACCCTGTCT-CAAAACAAAAAACAAACAAAC  193
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCCAGGGCTACACAGAGAAACCCTGTCTCCAAAACAAAAAACAAACAAAC  194

seq1  AAAACAAACAAACAAA-CCATGCATCTGTAGCCACAGTGCTGTGGCTGAG  242
       ||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  -AAACAAACAAACAAACCCATGCATCTGTAGCCACAGTGCTGTGGCTGAG  243

seq1  GCCTGAGACCATCAGAGCCCTCAGTCATGTTAGCCAGCCAGCCTAGATGA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGACCATCAGAGCCCTCAGTCATGTTAGCCAGCCAGCCTAGATGA  293

seq1  ATTAGGATCCCCAGATCTAATGAAAGATGAAATGAAATAAAAAGATTGAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGATCCCCAGATCTAATGAAAGATGAAATGAAATAAAAAGATTGAG  343

seq1  AGTCATAAGAGAATACAGATGTGAACTCTGGCCCCTACATGCATACATGT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATAAGAGAATACAGATGTGAACTCTGGCCCCTACATGCATACATGT  393

seq1  GCATAACCATGTATATGCGTGTACATGCACACACTACATAAACACATTTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAACCATGTATATGCGTGTACATGCACACACTACATAAACACATTTA  443

seq1  TACACAACAGGAGAAGGAGAATTTAACAACTGTGTCTTTCCCATTAACAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAACAGGAGAAGGAGAATTTAACAACTGTGTCTTTCCCATTAACAT  493

seq1  ATAATAATGTTTAATATAAATGAGTGCGTATACAAAGATGTTACAGATAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATGTTTAATATAAATGAGTGCGTATACAAAGATGTTACAGATAA  543

seq1  CAGTGAAATGGAACTAATATATTTTTACTAATAATGGAATGGATATATTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAATGGAACTAATATATTTTTACTAATAATGGAATGGATATATTC  593

seq1  ATGCTAATGTATCCACTCCGTGGAATATGCTGGAGCTCAATAAGTATTCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAATGTATCCACTCCGTGGAATATGCTGGAGCTCAATAAGTATTCT  643

seq1  CCAGGAAATTAGAACAGTCTGTTTTTAAGGGCTACATCTTTGTATTTTAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAATTAGAACAGTCTGTTTTTAAGGGCTACATCTTTGTATTTTAT  693

seq1  ATTCTCACTTTTCTGCAAGATGCACAGACTTTCTCTGACTTAATTACTTC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCACTTTTCTGCAAGATGCACAGACTTTCTCTGACTTAATTACTTC  743

seq1  AGGAAGATGATTTCATGCTCATGGAGGTCACACACAACTCTCGTAGATTT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATGATTTCATGCTCATGGAGGTCACACACAACTCTCGTAGATTT  793

seq1  CGGAAGCTCTGCAAACATTATCTCAATTAAACTGTCATCGTCTCCTAAAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGCTCTGCAAACATTATCTCAATTAAACTGTCATCGTCTCCTAAAC  843

seq1  CCCAGCACCAACTCTCTTGTGCCTGTTGCTCCTTCGGCTTTGCTGAGTTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACCAACTCTCTTGTGCCTGTTGCTCCTTCGGCTTTGCTGAGTTT  893

seq1  TGCTGCCTGCAGTGATTGCCAGTTCTTTTCTCACTGGATTTCAGCAACAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCTGCAGTGATTGCCAGTTCTTTTCTCACTGGATTTCAGCAACAG  943

seq1  CAGGTCAGCTCTTCCTGATTCTCTGCAGAGCTGATGTCCCTGCCCAGACT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAGCTCTTCCTGATTCTCTGCAGAGCTGATGTCCCTGCCCAGACT  993

seq1  CTGTGCTCAGATGCAGTTGATTGGGTGCTCCTTGCTTGACACTTGTAAAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTCAGATGCAGTTGATTGGGTGCTCCTTGCTTGACACTTGTAAAT  1043

seq1  AAAAGATTCCCAGCCCTACTGTACAGTATACATGTAGGAGTCATACCTGG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTCCCAGCCCTACTGTACAGTATACATGTAGGAGTCATACCTGG  1093

seq1  AATTC  1097
      |||||
seq2  AATTC  1098