BAC Information

Click to search

BAC

Clone NameB6Ng01-327N24
Chromosome7 (Build37)
Map Location 32,714,122 - 32,715,217
singlet/doubletsinglet
Overlap genenone
Upstream geneHamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352
Downstream geneLOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327N24.bB6Ng01-327N24.g
ACCGA115291GA115292
length1,1001,156
definitionB6Ng01-327N24.b B6Ng01-327N24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttatgaccatgattaagatttcaagtttaacttccttctgata
agaaaccattcatctagcacctgagattcctgaaattattccccatgcta
cagggtattttggtacctctagccttccagtaatgacctttgccaagatt
tttctgcttctaaatgtaaattagtgtgaacatccataggcattttggga
ttttcctttccctgatggtcacccaataattcagggggttctagaacaac
tcatctcaatatccatcagtatgcaggtgacatttgtcgttttattcacc
ttcctgaggatgctgacgaacatgtatagatcagtatcatggctgctttt
gcaaagctggaggaggatgtgtagggctaaagaatacacaggaacagaag
cagagctacaccaatggattctctctggcacaggattttgtctatggaaa
aagatttgatccttttcaggcaacttccaaaacattcaagaaaaataata
atgttgtaggatgtggctgaaaagtaggaatgtagttaggcttataagaa
gctacagtggaacagctgtggcttcaaagtttcatgctccttgaaacttt
ccacacaaagtcacatctaatggggcagtattaggagatggggctattgg
tgtgtgataagaatccactgtacattttgttggctactgtgtgggttctt
ctttcttccacactccctcatcctctttcttccaccatttcaaactccta
acactagatgagagatttttttgtttgtttgtttgtttgtttttcttttt
ttgtttgttttgaaaacaacatggaggggaaggaaatagatcccagaata
aagtcaggggtcagaaaggtggcaatattattattagactacttcttgaa
taatttgggcaatggccttccatgaagcaacgtttgatctttcttgtcag
gatatataaatttcttcttactatttctattttgcacctgactacttaaa
agaccatgaccaacaacaatcaaccacccctcctcaaggacttagcttat
tacagcttaaaatgtcccagaatctacacaatcaacaaatcacacattct

gaattctttgtttattctgtgccccatttttttaatggggttatttgatt
ttctgaagtctacgttcttgtgctgtttgtatatattggaaattagtctc
ctatcaggttaaggattggtaaaaatcctttccaaatttgttggtggcct
ttttgtcttattgacagtgtcttttgccttacagaagctctgcaaattta
cgaggtcccatttgttgattctcgatcttacaccacaagacattgctgtt
ctgttcaggaatttttctcctgtgctcatatctttgtggcttttcccggc
tttctcctctataaatttcagtgtctcttgttttatgtggaggtctttga
tccatttagacttgaactttgtacaagaagacaagaatggatcaattaga
attcttctacatgattaccactagttgtgccaacaccatttgttgaaaat
tttgtcttttttccccctggatggctttagttcccttgtcaaagaacaag
tgaccttaggtgtgtagattaatttctggatcttcaattgtatttcattg
atctagctgtctgttgctggaccagtactatgcagtatttttttaaatca
caattggtctgtaatattgcttaatatcaggtgtggtgattcccccacag
tctctttttattattgagactggtttttgctatcctaggttttttattat
tttagatgaatttcaaaatggccgtttctaactcagtgaagaattgagtt
gcagttttgatggggagtgcattaaatgtgtagattgctttctgcaggat
agccattttgactatattaatcctgccaatccatgagcataggagatctt
tccatcttctgagatcttctttaatttctttcttcagaaatttgaacttg
ttatcatacagatctttcacttccttagttagagtcacaccaaagtatct
ttatattatttgtgactattgtgaaggtgttgtttctctatttaatttcg
tcagtctatttgtcctttggtgtagagcaaagtcattgatttgtttgaat
taagtttaatcatccttacttccggagcgtgtcatcgaaattgaaaggta
tctcgtggaatatataagactcactatctaatccgatctaatcaccgcgg
tgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32714122_32715217
seq2: B6Ng01-327N24.b_45_1144 (reverse)

seq1  AGAATGTGTGATTTG-TGA-TGTGTAGAATTCTGGGGACATTTTAAGGCT  48
      ||||||||||||||| ||| ||||||| ||||| |||||||||||| |||
seq2  AGAATGTGTGATTTGTTGATTGTGTAG-ATTCT-GGGACATTTTAA-GCT  47

seq1  GT-ATAATTGCTAGGTCC-TGA-GAGGGGTGGTTGATTGTTGTTGGTCAT  95
      || ||||  |||| |||| ||| |||||||||||||||||||||||||||
seq2  GTAATAA--GCTAAGTCCTTGAGGAGGGGTGGTTGATTGTTGTTGGTCAT  95

seq1  GGTCTTTTAAGTAGTCAGGTGCAAAATAGAAATAGTAAGAAGAAA-TTAT  144
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGTCTTTTAAGTAGTCAGGTGCAAAATAGAAATAGTAAGAAGAAATTTAT  145

seq1  ATATCCTGACAAGAAAGATC-AACGTTGCTTCATGG-AGGCCATTGCCCA  192
      |||||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  ATATCCTGACAAGAAAGATCAAACGTTGCTTCATGGAAGGCCATTGCCCA  195

seq1  AATTA-TCAAGAAGTAGTCTAATAATAATATTGCCACCTTTCTGACCCCT  241
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCAAGAAGTAGTCTAATAATAATATTGCCACCTTTCTGACCCCT  245

seq1  GACTTTATTCTGGGATCTATTTCCTTCCCCTCCATGTTGTTTTCAAAACA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTATTCTGGGATCTATTTCCTTCCCCTCCATGTTGTTTTCAAAACA  295

seq1  AACAAAAAAAGAAAAACAAACAAACAAACAAACAAAAAAATCTCTCATCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAAGAAAAACAAACAAACAAACAAACAAAAAAATCTCTCATCT  345

seq1  AGTGTTAGGAGTTTGAAATGGTGGAAGAAAGAGGATGAGGGAGTGTGGAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTAGGAGTTTGAAATGGTGGAAGAAAGAGGATGAGGGAGTGTGGAA  395

seq1  GAAAGAAGAACCCACACAGTAGCCAACAAAATGTACAGTGGATTCTTATC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGAACCCACACAGTAGCCAACAAAATGTACAGTGGATTCTTATC  445

seq1  ACACACCAATAGCCCCATCTCCTAATACTGCCCCATTAGATGTGACTTTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCAATAGCCCCATCTCCTAATACTGCCCCATTAGATGTGACTTTG  495

seq1  TGTGGAAAGTTTCAAGGAGCATGAAACTTTGAAGCCACAGCTGTTCCACT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAGTTTCAAGGAGCATGAAACTTTGAAGCCACAGCTGTTCCACT  545

seq1  GTAGCTTCTTATAAGCCTAACTACATTCCTACTTTTCAGCCACATCCTAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTCTTATAAGCCTAACTACATTCCTACTTTTCAGCCACATCCTAC  595

seq1  AACATTATTATTTTTCTTGAATGTTTTGGAAGTTGCCTGAAAAGGATCAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTATTATTTTTCTTGAATGTTTTGGAAGTTGCCTGAAAAGGATCAA  645

seq1  ATCTTTTTCCATAGACAAAATCCTGTGCCAGAGAGAATCCATTGGTGTAG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTCCATAGACAAAATCCTGTGCCAGAGAGAATCCATTGGTGTAG  695

seq1  CTCTGCTTCTGTTCCTGTGTATTCTTTAGCCCTACACATCCTCCTCCAGC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTCTGTTCCTGTGTATTCTTTAGCCCTACACATCCTCCTCCAGC  745

seq1  TTTGCAAAAGCAGCCATGATACTGATCTATACATGTTCGTCAGCATCCTC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAAAGCAGCCATGATACTGATCTATACATGTTCGTCAGCATCCTC  795

seq1  AGGAAGGTGAATAAAACGACAAATGTCACCTGCATACTGATGGATATTGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTGAATAAAACGACAAATGTCACCTGCATACTGATGGATATTGA  845

seq1  GATGAGTTGTTCTAGAACCCCCTGAATTATTGGGTGACCATCAGGGAAAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTTGTTCTAGAACCCCCTGAATTATTGGGTGACCATCAGGGAAAG  895

seq1  GAAAATCCCAAAATGCCTATGGATGTTCACACTAATTTACATTTAGAAGC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCCAAAATGCCTATGGATGTTCACACTAATTTACATTTAGAAGC  945

seq1  AGAAAAATCTTGGCAAAGGTCATTACTGGAAGGCTAGAGGTACCAAAATA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATCTTGGCAAAGGTCATTACTGGAAGGCTAGAGGTACCAAAATA  995

seq1  CCCTGTAGCATGGGGAATAATTTCAGGAATCTCAGGTGCTAGATGAATGG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAGCATGGGGAATAATTTCAGGAATCTCAGGTGCTAGATGAATGG  1045

seq1  TTTCTTATCAGAAGGAAGTTAAACTTGAAATCTTAATCATGGTCATAAGG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATCAGAAGGAAGTTAAACTTGAAATCTTAATCATGGTCATAAGG  1095

seq1  AATTC  1096
      |||||
seq2  AATTC  1100