BAC Information

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BAC

Clone NameB6Ng01-328C23
Chromosome7 (Build37)7 (Build37)
Map Location 68,331,596 - 68,332,116147,890,204 - 147,891,254
singlet/doubletsingletsinglet
Overlap geneD0Kist2
Upstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, LOC100041248
Downstream geneLOC100041259, EG664943, B230209E15Rik, EG620934, LOC100041293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328C23.bB6Ng01-328C23.g
ACCGA115517GA115518
length1,1301,056
definitionB6Ng01-328C23.b B6Ng01-328C23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,331,596 - 68,332,116)(147,890,204 - 147,891,254)
sequence
gaattctattccattgttctacctgtctgtcactataccagtaccatgca
gtttttaccacaattgctctatagtaaggatttaggtcaggcatggtgat
tctaccacaggttcttttatcctacagaagagtttttgctatgctaagtt
ttttgttattccagaaggatttgcagattgccctttctaattcgttgaag
aattgagttggaattttgatggggattgcattgaatctgtagattgcttt
tggcaagaaagccatttttactatattgatcctgccaatccatgagcatg
ggagatcttgacaactactgagaacttctttaatttctttcttcagagac
ttgaagtttttatcatacagatctttcacttccttatttagagtcatgcc
aagatattttatattatttgtgactatttagaagggtgttgtttccctaa
tttctttctcagcctgtttatcctttgtgtacagaaaggccattgacttg
tttgagttaattttatatgcagctacttcactgaagctgtgtatcaggtt
taggagttctctggtggaatttttagggtcacatatatatactatcatat
catctgcaaaaagtgatattttgacttcctcttttccaatttgtatcccc
ttgatctccttttgttgtcaaattgctctggctaggacttcaaacacaat
gttcaataggtagggagaaagtgggcagccttgtctagtccctgatttta
gtgggattgcttccagtttctcaacatttcttttgatgttggctactggt
ttgctgtagattgcttttattgtgtttaggtatgggccttgaattcctga
tctttctaagacttttatcatgaatcggttggattttgtcaaatgctttc
tctgaatctaaagagatgatcgtgtgattattgtctctgtgtttgtttat
atactggattatgttgctggatttctgtatactgaaacatctctgcatcc
cctggatgaaacctacttggtcaggatggatgattgttttgaagtgttct
tcaattcagttagcaaaactttattaagaatttgcatcgatatttcataa
aggaaatgggtctgaagttctctatacttt

gaattctgttgttttggaaattacagtgagtggaattgctcagtacatgc
atcaaagaaaggttttctgaagcagcgatgggtacactttgctccgtgaa
gctgctctcaggaaagcatgtctaggaacagcccagtccaggaggatatt
ctacacatctcctcttaatgtgagaaagagggtaagattctgcccagggc
aagcttgacatccttgttcctcagtgtatagatgagggggttgagggttg
ggctgaggactgagtacagcactgaggaaactttgcttctttctgggctg
tagctagaagcagggctgacataggcacagaacacagatgagtagtacac
agagaccacaatgaggtgggatgagcaggtagaaaaggccttcctcttgc
cctcagcagaacgcatgcgcaggatgctgccaatgatgtagccataggac
aacagtgttagcacgaagttgatgcctccataaaaggcatctgccacaag
tgtcataacactattaatgtatgtgggactacaggaaagcaggaggagtg
ggggtatctcacagaagaagtgggtgatgatcttgggtccacagaatgac
agccgtgtcatcagaccagtgtgtacagatgcattcagagcacagatgga
ccacacacccacggccagagccccacagagctgtgggctcatcctagagc
tgtagtgtaggggaaaacagatggccacatagcggtcataggccatgacc
gtgagcagcagcagctcagaagatgctgaccacacaaggaaaaagagctg
ggccatgcatcctttgaaggagatggtgttttccccagacactaggccaa
ccagggccttgggaatcacagaggaggtgcacacaatgtcccatggtggc
caggttgcacaggaaaaagtacatgggactatggagcccagtgctggagg
tgaccaaagcgatgatcaacatgttgcccattagagccatcatgtagagg
ggacaggaagcagcctatgaggaacaatcttaagaatcatggtgctctga
agaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68331596_68332116
seq2: B6Ng01-328C23.b_659_1176 (reverse)

seq1  AAAG-ATAGAGAACTTCAGACCAATTTCTCTTATG-AATATCGATGCAAA  48
      |||| ||||||||||||||||| |||||  ||||| |||||||||||  |
seq2  AAAGTATAGAGAACTTCAGACCCATTTCCTTTATGAAATATCGATGC--A  48

seq1  AATCCTCAATAAAATTCTCGCTAACCGAATCCAAGATCACATTAAAGCAA  98
      ||| || |||||| || | |||||| ||||  |||| ||| | ||| |||
seq2  AATTCTTAATAAAGTT-TTGCTAACTGAATTGAAGAACACTTCAAAACAA  97

seq1  TCATCCATCCTGACCAAGTAGGTTTTATTCCAGGAATGCAGGGATGGTTT  148
      ||||||||||||||||||||||||| || |  || |||||| |||| || 
seq2  TCATCCATCCTGACCAAGTAGGTTTCATCCAGGGGATGCAGAGATGTTTC  147

seq1  AATATACGAAAATCCATCAATGTAATCCACTATATAAACAAACTCAAAGA  198
      | |||||  ||||||| |||  ||||||| ||||||||||||| || |||
seq2  AGTATACAGAAATCCAGCAACATAATCCAGTATATAAACAAACACAGAGA  197

seq1  CAAAAACCACATGATCATCTCGTTGGATGCAGAAAAAGCATTTGACAAGA  248
      ||| || |||| ||||||||| || ||| |||| |||||||||||||| |
seq2  CAATAATCACACGATCATCTCTTTAGATTCAGAGAAAGCATTTGACAAAA  247

seq1  TCCAACACCCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTCAAGGC  298
      ||||  ||| |||||||||||||||  | |||||||||||||||||||||
seq2  TCCA--ACCGATTCATGATAAAAGTCTTAGAAAGATCAGGAATTCAAGGC  295

seq1  CCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCAACAT  348
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  CCATACCTAAACACAATAAAAGCAATCTACAGCAAACCAGTAGCCAACAT  345

seq1  CAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTA  398
      ||||  |||||  ||||| |||||||||||||||||||||||||||||||
seq2  CAAAAGAAATGTTGAGAAACTGGAAGCAATCCCACTAAAATCAGGGACTA  395

seq1  GACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGAAGTA  448
      |||||||||||||||||||||||||||| || ||||| ||  ||||||| 
seq2  GACAAGGCTGCCCACTTTCTCCCTACCTATTGAACATTGTGTTTGAAGTC  445

seq1  TTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGG  498
       |||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTAGCCAGAGCAATTTGACAACAAAAGGAGATCAAGGGGATACAAATTGG  495

seq1  AAAAGAGGAAGTCAAAATATCAC  521
      |||||||||||||||||||||||
seq2  AAAAGAGGAAGTCAAAATATCAC  518


seq1: chr7_147890204_147891254
seq2: B6Ng01-328C23.g_68_1123 (reverse)

seq1  GGTTC-TCAGAGCACCCTGAT--CTAAGATTGTTCCTCATAGGCTGCTTC  47
      ||||| |||||||||| ||||   ||||||||||||||||||||||||||
seq2  GGTTCTTCAGAGCACCATGATTCTTAAGATTGTTCCTCATAGGCTGCTTC  50

seq1  CTGT-CCCTCTACATGATGGCTCTAATGGGCAACATTGTGATCATCGCTT  96
      |||| |||||||||||||||||||||||||||||||  ||||||||||||
seq2  CTGTCCCCTCTACATGATGGCTCTAATGGGCAACATGTTGATCATCGCTT  100

seq1  TGGTCACCTCCAGCACTGGGCTCCATAGTCCCATGTACTTTTTCCTGTGC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACCTCCAGCACTGGGCTCCATAGTCCCATGTACTTTTTCCTGTGC  150

seq1  AACCTGGCCACCAT-GGACATTGTGTGCACCTCCTCTGTGATTCCCAAGG  195
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AACCTGGCCACCATGGGACATTGTGTGCACCTCCTCTGTGATTCCCAAGG  200

seq1  CCCTGGTTGGCCTAGTGTCTGGGGAAAACACCATCTCCTTCAAAGGATGC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTTGGCCTAGTGTCTGGGGAAAACACCATCTCCTTCAAAGGATGC  250

seq1  ATGGCCCAGCTCTTTTTCCTTGTGTGGTCAGCATCTTCTGAGCTGCTGCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCAGCTCTTTTTCCTTGTGTGGTCAGCATCTTCTGAGCTGCTGCT  300

seq1  GCTCACGGTCATGGCCTATGACCGCTATGTGGCCATCTGTTTTCCCCTAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACGGTCATGGCCTATGACCGCTATGTGGCCATCTGTTTTCCCCTAC  350

seq1  ACTACAGCTCTAGGATGAGCCCACAGCTCTGTGGGGCTCTGGCCGTGGGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGCTCTAGGATGAGCCCACAGCTCTGTGGGGCTCTGGCCGTGGGT  400

seq1  GTGTGGTCCATCTGTGCTCTGAATGCATCTGTACACACTGGTCTGATGAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTCCATCTGTGCTCTGAATGCATCTGTACACACTGGTCTGATGAC  450

seq1  ACGGCTGTCATTCTGTGGACCCAAGATCATCACCCACTTCTTCTGTGAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCTGTCATTCTGTGGACCCAAGATCATCACCCACTTCTTCTGTGAGA  500

seq1  TACCCCCACTCCTCCTGCTTTCCTGTAGTCCCACATACATTAATAGTGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCACTCCTCCTGCTTTCCTGTAGTCCCACATACATTAATAGTGTT  550

seq1  ATGACACTTGTGGCAGATGCCTTTTATGGAGGCATCAACTTCGTGCTAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACTTGTGGCAGATGCCTTTTATGGAGGCATCAACTTCGTGCTAAC  600

seq1  ACTGTTGTCCTATGGCTACATCATTGGCAGCATCCTGCGCATGCGTTCTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGTCCTATGGCTACATCATTGGCAGCATCCTGCGCATGCGTTCTG  650

seq1  CTGAGGGCAAGAGGAAGGCCTTTTCTACCTGCTCATCCCACCTCATTGTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGCAAGAGGAAGGCCTTTTCTACCTGCTCATCCCACCTCATTGTG  700

seq1  GTCTCTGTGTACTACTCATCTGTGTTCTGTGCCTATGTCAGCCCTGCTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTGTACTACTCATCTGTGTTCTGTGCCTATGTCAGCCCTGCTTC  750

seq1  TAGCTACAGCCCAGAAAGAAGCAAAGTTTCCTCAGTGCTGTACTCAGTCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACAGCCCAGAAAGAAGCAAAGTTTCCTCAGTGCTGTACTCAGTCC  800

seq1  TCAGCCCAACCCTCAACCCCCTCATCTATACACTGAGGAACAAGGATGTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCAACCCTCAACCCCCTCATCTATACACTGAGGAACAAGGATGTC  850

seq1  AAGCTTGCCCTGGGCAGAATCTTACCCTCTTTCTCACATTAAGAGGAGAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGCCCTGGGCAGAATCTTACCCTCTTTCTCACATTAAGAGGAGAT  900

seq1  GTGTAGAATATCCTCCTGGACTGGGCTGTTCCTAGACATGCTTTCCTGAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAATATCCTCCTGGACTGGGCTGTTCCTAGACATGCTTTCCTGAG  950

seq1  AGCAGCTTCACGGAGCAAAGTGTACCCATCGCTGCTTCAGAAAACCTTTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTTCACGGAGCAAAGTGTACCCATCGCTGCTTCAGAAAACCTTTC  1000

seq1  TTTGATGCATGTACTGAGCAATTCCACTCACTGTAATTTCCAAAACAACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGCATGTACTGAGCAATTCCACTCACTGTAATTTCCAAAACAACA  1050

seq1  GAATTC  1051
      ||||||
seq2  GAATTC  1056


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