BAC Information

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BAC

Clone NameB6Ng01-328D17
Chromosome7 (Build37)
Map Location 132,365,430 - 132,366,588
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628779, EG545999, LOC670828
Downstream gene4933440M02Rik, LOC100043014, Jmjd5, Nsmce1, EG244214, Il4ra, Il21r, Gtf3c1, D430042O09Rik, Gsg1l, Xpo6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328D17.bB6Ng01-328D17.g
ACCGA115553GA115554
length1,1481,209
definitionB6Ng01-328D17.b B6Ng01-328D17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagtgagacctagttacataaaaccaaaaccagccaacccaca
aaccaaaacctttctctcacttgcagccactgtcttttctcaccccatcc
ctgcatagtggctgcctctcctcatccctccttgcacagtcactgactct
cctcaccctatccctgcacagtggctgcctcttctcaccctatccctgca
cagtgtctgcctctctccaccccatccctgcatagtggctgcctctcctc
accctatccctgcacagtcactgcctctcttcaccccatccctacacagt
cactgcctctccttaccccacccctacacagtaactgcatccctgcacag
tcactgtctctcctcaccttatccctgcacagtgactgcctctcttcacc
tcattcctgcacagtcactgcctctttttacccctagccctagacagcca
ttgcctctccttgcctctcactgcctctgaaccagtaggctacttgttgg
ctgggcaggttttctcttttcagactttcgatgcagatggcgtctcagtg
tgcggccaaggcatctgggtccttcaagattgtgtttttgaagttaattc
atgtttttgtactcccattcacactttttaatttctgaatggccctcact
ttttactgttggtcattttggtcgttttaagcctttggcaactatgaata
gtactactatgaacatatagacacagttttttgtgcacttttatttttaa
gactttttagtttcatattttgtgtaagtatatggacatttgtgctcagg
ggcgtgcatctgtgtgtccatgcagagaggccaccccccaagtggtatca
ggtggtgtcccctgccacttcctaactattcttttgcagtagggtctcac
tctaatctgggcctcatctttccttggctcagccagaaatcatcaagccc
cagcgatcctcttgtccctgcctccctagagctggagaaaacaggagtgc
acagagaaacaggagtgcacaggagaaacaggagtgcacagagaaacagg
cgtgcaccaggagaaacaggatgcacagagaaacaggatgccacagagaa
aacaggatgcacaggagaaatggatgcacaggaaactgctgcacagga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacattcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggagaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcagccttgtacaaccactctgaaaattagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttgtgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgcaaaatacatgaaactcaag
aagaatgaagactgaagtgtagacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcacccta
taggtggaacacatatgactaaccagtacccggagctcttgactctagct
gcatatatatcaaaagatggctagttggtcatcactggaagagaaggccc
aatggacacgccaactgttatatgcccagttacagggacgccagtcaaaa
aatgcaatgactgggtaagggatagtgtggggcgtaactttgcgtgtaca
cgtgtgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_132365430_132366588
seq2: B6Ng01-328D17.b_46_1193 (reverse)

seq1  TCCTGTGCACGCCTGTTTCTCCTGTGCACTCCTGTTTCTCCTGTGCACTC  50
      |||||||||   | |||  ||||||||| |||  ||||||||||||| ||
seq2  TCCTGTGCA--GCAGTT--TCCTGTGCA-TCC-ATTTCTCCTGTGCA-TC  43

seq1  CTGTTTCTCCTGTGCACTCCTGTTTCTCCTGTGCACTCCTGTTTCTCCT-  99
      ||||||   |||||   |||||||||| ||||||| ||||||||||||| 
seq2  CTGTTTTCTCTGTGGCATCCTGTTTCT-CTGTGCA-TCCTGTTTCTCCTG  91

seq1  GTGCACGCCTGTTTCTCCTGTGCACTCCTGTTTCTCCTGTGCACTCCTGT  149
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGCACGCCTGTTTCT-CTGTGCACTCCTGTTTCTCCTGTGCACTCCTGT  140

seq1  TTCTCCTGTGCACTCCTG-TTTCTCCAGCTCCTAGGGAGGCAGGGACAAG  198
      |||| ||||||||||||| ||||||||||| |||||||||||||||||||
seq2  TTCT-CTGTGCACTCCTGTTTTCTCCAGCT-CTAGGGAGGCAGGGACAAG  188

seq1  AGGATCGCTGGGGCTTGATGATTTCTGGCTGAGCCAAGGAAAGATGAGGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCGCTGGGGCTTGATGATTTCTGGCTGAGCCAAGGAAAGATGAGGC  238

seq1  CCAGATTTAGAGTGAGACCCTACTGCAAAAGAATAGTTAGGAAGTGGCAG  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGA-TTAGAGTGAGACCCTACTGCAAAAGAATAGTTAGGAAGTGGCAG  287

seq1  GGGACACCACCTGATACCACTTGGGGGGTGGCCTCTCTGCATGGACACAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACCACCTGATACCACTTGGGGGGTGGCCTCTCTGCATGGACACAC  337

seq1  AGATGCACGCCCCTGAGCACAAATGTCCATATACTTACACAAAATATGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCACGCCCCTGAGCACAAATGTCCATATACTTACACAAAATATGAA  387

seq1  ACTAAAAAGTCTTAAAAATAAAAGTGCACAAAAAACTGTGTCTATATGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAGTCTTAAAAATAAAAGTGCACAAAAAACTGTGTCTATATGTT  437

seq1  CATAGTAGTACTATTCATAGTTGCCAAAGGCTTAAAACGACCAAAATGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAGTACTATTCATAGTTGCCAAAGGCTTAAAACGACCAAAATGAC  487

seq1  CAACAGTAAAAAGTGAGGGCCATTCAGAAATTAAAAAGTGTGAATGGGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTAAAAAGTGAGGGCCATTCAGAAATTAAAAAGTGTGAATGGGAG  537

seq1  TACAAAAACATGAATTAACTTCAAAAACACAATCTTGAAGGACCCAGATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAACATGAATTAACTTCAAAAACACAATCTTGAAGGACCCAGATG  587

seq1  CCTTGGCCGCACACTGAGACGCCATCTGCATCGAAAGTCTGAAAAGAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCCGCACACTGAGACGCCATCTGCATCGAAAGTCTGAAAAGAGAA  637

seq1  AACCTGCCCAGCCAACAAGTAGCCTACTGGTTCAGAGGCAGTGAGAGGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCCCAGCCAACAAGTAGCCTACTGGTTCAGAGGCAGTGAGAGGCA  687

seq1  AGGAGAGGCAATGGCTGTCTAGGGCTAGGGGTAAAAAGAGGCAGTGACTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGCAATGGCTGTCTAGGGCTAGGGGTAAAAAGAGGCAGTGACTG  737

seq1  TGCAGGAATGAGGTGAAGAGAGGCAGTCACTGTGCAGGGATAAGGTGAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAATGAGGTGAAGAGAGGCAGTCACTGTGCAGGGATAAGGTGAGG  787

seq1  AGAGACAGTGACTGTGCAGGGATGCAGTTACTGTGTAGGGGTGGGGTAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGTGACTGTGCAGGGATGCAGTTACTGTGTAGGGGTGGGGTAAG  837

seq1  GAGAGGCAGTGACTGTGTAGGGATGGGGTGAAGAGAGGCAGTGACTGTGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGTGACTGTGTAGGGATGGGGTGAAGAGAGGCAGTGACTGTGC  887

seq1  AGGGATAGGGTGAGGAGAGGCAGCCACTATGCAGGGATGGGGTGGAGAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATAGGGTGAGGAGAGGCAGCCACTATGCAGGGATGGGGTGGAGAGA  937

seq1  GGCAGACACTGTGCAGGGATAGGGTGAGAAGAGGCAGCCACTGTGCAGGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACACTGTGCAGGGATAGGGTGAGAAGAGGCAGCCACTGTGCAGGG  987

seq1  ATAGGGTGAGGAGAGTCAGTGACTGTGCAAGGAGGGATGAGGAGAGGCAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGTGAGGAGAGTCAGTGACTGTGCAAGGAGGGATGAGGAGAGGCAG  1037

seq1  CCACTATGCAGGGATGGGGTGAGAAAAGACAGTGGCTGCAAGTGAGAGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATGCAGGGATGGGGTGAGAAAAGACAGTGGCTGCAAGTGAGAGAA  1087

seq1  AGGTTTTGGTTTGTGGGTTGGCTGGTTTTGGTTTTATGTAACTAGGTCTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTGGTTTGTGGGTTGGCTGGTTTTGGTTTTATGTAACTAGGTCTC  1137

seq1  ACTATGAATTC  1159
      |||||||||||
seq2  ACTATGAATTC  1148