BAC Information

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BAC

Clone NameB6Ng01-328F03
Chromosome7 (Build37)
Map Location 107,908,012 - 108,063,191
singlet/doubletdoublet
Overlap geneB930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17
Upstream geneOlfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1
Downstream geneP2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328F03.bB6Ng01-328F03.g
ACCGA115619GA115620
length1,1811,091
definitionB6Ng01-328F03.b B6Ng01-328F03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,062,022 - 108,063,191)(107,908,012 - 107,909,110)
sequence
gaattcaaggtcattttagccaataatgggaagttcaaggccagtctggg
ctctagagaccctgtctgaaaaaaagacacacagcttccttctttttcaa
atcctgttcatcttcactgtgtgaccatgagcgcttaacctcactgtggt
tcaacacatggcgtaggtacatataaaatgtggataatgacggcacctat
tacagggttgctctgagagctaaatgtgataacgtctggcggctggtctg
gagatcagtggtgagccataaggcaagttggaagggatggagagtggtga
cctgccctgcctgaggaaggaccacagggatggagaggggcgtgctttga
gatggggtagtgacagtggcttagtgcagtttggtagaaggatgagctag
ctgagttcctggtggaaagctttgaagtccctgatgcagctgttcctagg
aaaagggctcagatcgggtacagagcagggatgtggccttggtactgtgc
ctaattctcactggtagacacccccacgccccagtgtagctacccattcc
tatcaggatagctgaccccggacccagatgtgggtgtaattgccagcatg
accctgtaaattccgactccaaagccttcgtgcagaatgaggactcattt
ccaagcaccagccagggaagctcagccctcaaagagatgaggatggccct
ttggcctaaagaagtgttctacctgtctctgaggaaggggcaaagccagg
ccttggtctgccgagtgagcagttgggcttcctggagagttgtcacctga
gagactggacgtgttagagacaccaaagacagaggctgtgctcttagggc
tcagagaactggcctggatcacatcggtgctaggtggcagccacctcggg
acctggttctgtgtatagatgagaggcacagctcagtgccagggatgtca
ggaagtggtctgagccagggcagagatccattggactggatctaaccgag
cagacccaacagtccctgcccagagggaggaaggagaggcactcacagca
gccttccattatactttttgtactgcatagtgttcttttaccggtgggac
atgtagctgcatggtgggtgcgtcgtacctgcgatttccttgcgcctcag
gaggcttgaagcaaccagcaatccgtcttaa
gaattcactgtaatcctttgcctagggcttccttgtgctataatgaccct
ccttttttttttttttctccaatcttattttaattgtttttgaatagtag
aagcttgtttatatagtctaggctggcctcaaaattattatctttctgcc
taagcttaacaagtactgggattatagtgtgtgccattgtagggcttgga
tccaaagattgtttagatttaatataccagtgtgtggattttagaaaaga
aaagctagacctaaagaaggacagggacttagtttgagtttatatagtaa
tttgaaatgtacagccaaaagtagaacttttgtattcctattctaagctc
agtacttaccatgccatattttgttgtcaatgttaaattttaaagcattc
tctaaatatgagatagcattttatcattattttctgcttagctgatagct
tgctctattaccacaaacaagtcacgtatgccctttaaccaaatgacaga
gcaagttgtttattttttaagatttaattgtatttttaattgtatgataa
ggatgcctggtgctcctggaggccagaagagagcgttgggtcctctggag
ccggagttgcagatgactgtgaactcaggtcctctacgggcagcacagtg
agagcagcacccataactgcccagctgtgcctacagccgtgaattgctct
tagctgtgaaatggggatatttaatactcattataaattatactgagtag
taattgaaatgaaatacgtaaaagctgcttaggtaatttttaataatcag
aaggtactaaccaaatgctgattcagctcagttcagtagacaatgattaa
acatctattttgtaccagttcagtttctacactctttttatgttgtcttt
tttaccatgtcactttcttgttgtagctcctttttttttttttttttaca
tttattttattattatacatcagtatactgtagctgactagacgcaccag
atctcattacaggtggttgtgagtgttgctggattggacctcaaggaact
tggagagcatcagtaactctacctgctgacatctccagccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_108062022_108063191
seq2: B6Ng01-328F03.b_44_1224 (reverse)

seq1  TTAAGACG--ATGCTGG-TGCCTC-AGCCTCCTGA-GCGCA--GGAATCG  43
      ||||||||   |||||| ||| || |||||||||| |||||  | |||||
seq2  TTAAGACGGATTGCTGGTTGCTTCAAGCCTCCTGAGGCGCAAGGAAATCG  50

seq1  CAGGTACGACGCACC--ACATGCAGCTACATGTCCCACC-GTAAA--GAC  88
      |||||||||||||||   ||||||||||||||||||||| |||||   ||
seq2  CAGGTACGACGCACCCACCATGCAGCTACATGTCCCACCGGTAAAAGAAC  100

seq1  ACTATGCAGTACAAAAAGTAT-ATGGAAGGCTGCTGTGAGTGGCCTCTTC  137
      ||||||||||||||||||||| ||||||||||||||||||| ||||| ||
seq2  ACTATGCAGTACAAAAAGTATAATGGAAGGCTGCTGTGAGT-GCCTC-TC  148

seq1  CTTCCTCCCTCTGGGCAGGGACTGTTGGGTCTGCTCGGTTAGATCCAGTC  187
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCCTCTGGGCAGGGACTGTTGGGTCTGCTCGGTTAGATCCAGTC  198

seq1  CAATGGATCTCTGCCCTGGCTCAGACCACTTCCTGACATCCCTGGCACTG  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGATCTCTGCCCTGGCTCAGACCACTTCCTGACATCCCTGGCACTG  248

seq1  AGCTGTGCCTCTCATCTATACACAGAACCAGGTCCCGAGGTGGCTGCCAC  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGCCTCTCATCTATACACAGAACCAGGTCCCGAGGTGGCTGCCAC  298

seq1  CTAGCACCGATGTGATCCAGGCCAGTTCTCTGAGCCCTAAGAGCACAGCC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACCGATGTGATCCAGGCCAGTTCTCTGAGCCCTAAGAGCACAGCC  348

seq1  TCTGTCTTTGGTGTCTCTAACACGTCCAGTCTCTCAGGTGACAACTCTCC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTTGGTGTCTCTAACACGTCCAGTCTCTCAGGTGACAACTCTCC  398

seq1  AGGAAGCCCAACTGCTCACTCGGCAGACCAAGGCCTGGCTTTGCCCCTTC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCCCAACTGCTCACTCGGCAGACCAAGGCCTGGCTTTGCCCCTTC  448

seq1  CTCAGAGACAGGTAGAACACTTCTTTAGGCCAAAGGGCCATCCTCATCTC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGACAGGTAGAACACTTCTTTAGGCCAAAGGGCCATCCTCATCTC  498

seq1  TTTGAGGGCTGAGCTTCCCTGGCTGGTGCTTGGAAATGAGTCCTCATTCT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGGCTGAGCTTCCCTGGCTGGTGCTTGGAAATGAGTCCTCATTCT  548

seq1  GCACGAAGGCTTTGGAGTCGGAATTTACAGGGTCATGCTGGCAATTACAC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGAAGGCTTTGGAGTCGGAATTTACAGGGTCATGCTGGCAATTACAC  598

seq1  CCACATCTGGGTCCGGGGTCAGCTATCCTGATAGGAATGGGTAGCTACAC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTGGGTCCGGGGTCAGCTATCCTGATAGGAATGGGTAGCTACAC  648

seq1  TGGGGCGTGGGGGTGTCTACCAGTGAGAATTAGGCACAGTACCAAGGCCA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCGTGGGGGTGTCTACCAGTGAGAATTAGGCACAGTACCAAGGCCA  698

seq1  CATCCCTGCTCTGTACCCGATCTGAGCCCTTTTCCTAGGAACAGCTGCAT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTGCTCTGTACCCGATCTGAGCCCTTTTCCTAGGAACAGCTGCAT  748

seq1  CAGGGACTTCAAAGCTTTCCACCAGGAACTCAGCTAGCTCATCCTTCTAC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACTTCAAAGCTTTCCACCAGGAACTCAGCTAGCTCATCCTTCTAC  798

seq1  CAAACTGCACTAAGCCACTGTCACTACCCCATCTCAAAGCACGCCCCTCT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGCACTAAGCCACTGTCACTACCCCATCTCAAAGCACGCCCCTCT  848

seq1  CCATCCCTGTGGTCCTTCCTCAGGCAGGGCAGGTCACCACTCTCCATCCC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTGTGGTCCTTCCTCAGGCAGGGCAGGTCACCACTCTCCATCCC  898

seq1  TTCCAACTTGCCTTATGGCTCACCACTGATCTCCAGACCAGCCGCCAGAC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACTTGCCTTATGGCTCACCACTGATCTCCAGACCAGCCGCCAGAC  948

seq1  GTTATCACATTTAGCTCTCAGAGCAACCCTGTAATAGGTGCCGTCATTAT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCACATTTAGCTCTCAGAGCAACCCTGTAATAGGTGCCGTCATTAT  998

seq1  CCACATTTTATATGTACCTACGCCATGTGTTGAACCACAGTGAGGTTAAG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTTATATGTACCTACGCCATGTGTTGAACCACAGTGAGGTTAAG  1048

seq1  CGCTCATGGTCACACAGTGAAGATGAACAGGATTTGAAAAAGAAGGAAGC  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCATGGTCACACAGTGAAGATGAACAGGATTTGAAAAAGAAGGAAGC  1098

seq1  TGTGTGTCTTTTTTTCAGACAGGGTCTCTAGAGCCCAGACTGGCCTTGAA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTCTTTTTTTCAGACAGGGTCTCTAGAGCCCAGACTGGCCTTGAA  1148

seq1  CTTCCCATTATTGGCTAAAATGACCTTGAATTC  1170
      |||||||||||||||||||||||||||||||||
seq2  CTTCCCATTATTGGCTAAAATGACCTTGAATTC  1181

seq1: chr7_107908012_107909110
seq2: B6Ng01-328F03.g_64_1154

seq1  GAATTCACTGTAATCCTTTGCCTAGGGCTTCCTTGTGCTATAATGACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTAATCCTTTGCCTAGGGCTTCCTTGTGCTATAATGACCCT  50

seq1  CCTTTTTTTTTTTTTTCTCCAATCTTATTTTAATTGTTTTTGAATAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTTTTTTTTTCTCCAATCTTATTTTAATTGTTTTTGAATAGTAG  100

seq1  AAGCTTGTTTATATAGTCTAGGCTGGCCTCAAAATTATTATCTTTCTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGTTTATATAGTCTAGGCTGGCCTCAAAATTATTATCTTTCTGCC  150

seq1  TAAGCTTAACAAGTACTGGGATTATAGTGTGTGCCATTGTAGGGCTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTAACAAGTACTGGGATTATAGTGTGTGCCATTGTAGGGCTTGGA  200

seq1  TCCAAAGATTGTTTAGATTTAATATACCAGTGTGTGGATTTTAGAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGATTGTTTAGATTTAATATACCAGTGTGTGGATTTTAGAAAAGA  250

seq1  AAAGCTAGACCTAAAGAAGGACAGGGACTTAGTTTGAGTTTATATAGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAGACCTAAAGAAGGACAGGGACTTAGTTTGAGTTTATATAGTAA  300

seq1  TTTGAAATGTACAGCCAAAAGTAGAACTTTTGTATTCCTATTCTAAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATGTACAGCCAAAAGTAGAACTTTTGTATTCCTATTCTAAGCTC  350

seq1  AGTACTTACCATGCCATATTTTGTTGTCAATGTTAAATTTTAAAGCATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTACCATGCCATATTTTGTTGTCAATGTTAAATTTTAAAGCATTC  400

seq1  TCTAAATATGAGATAGCATTTTATCATTATTTTCTGCTTAGCTGATAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATATGAGATAGCATTTTATCATTATTTTCTGCTTAGCTGATAGCT  450

seq1  TGCTCTATTACCACAAACAAGTCACGTATGCCCTTTAACCAAATGACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTATTACCACAAACAAGTCACGTATGCCCTTTAACCAAATGACAGA  500

seq1  GCAAGTTGTTTATTTTTTAAGATTTAATTGTATTTTTAATTGTATGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTGTTTATTTTTTAAGATTTAATTGTATTTTTAATTGTATGATAA  550

seq1  GGATGCCTGGTGCTCCTGGAGGCCAGAAGAGAGCGTTGGGTCCTCTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCTGGTGCTCCTGGAGGCCAGAAGAGAGCGTTGGGTCCTCTGGAG  600

seq1  CCGGAGTTGCAGATGACTGTGAACTCAGGTCCTCTACGGGCAGCACAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGTTGCAGATGACTGTGAACTCAGGTCCTCTACGGGCAGCACAGTG  650

seq1  AGAGCAGCACCCATAACTGCCCAGCTGTGCCTACAGCCGTGAATTGCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCACCCATAACTGCCCAGCTGTGCCTACAGCCGTGAATTGCTCT  700

seq1  TAGCTGTGAAATGGGGATATTTAATACTCATTATAAATTATACTGAGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTGAAATGGGGATATTTAATACTCATTATAAATTATACTGAGTAG  750

seq1  TAATTGAAATGAAATACGTAAAAGCTGCTTAGGTAATTTTTAATAATCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAAATGAAATACGTAAAAGCTGCTTAGGTAATTTTTAATAATCAG  800

seq1  AAGGTACTAACCAAATGCTGATTCAGCTCAGTTCAGTAGACAATGATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTACTAACCAAATGCTGATTCAGCTCAGTTCAGTAGACAATGATTAA  850

seq1  ACATCTATTTTGTACCAGTTCAGTTTCTACACTC-TTTTATGTTGTCTTT  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACATCTATTTTGTACCAGTTCAGTTTCTACACTCTTTTTATGTTGTCTTT  900

seq1  TTTACCATGTCACTTTCTTGTTGTAGCTCC-TTTTTTTTTTTTTTTTACA  948
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTACCATGTCACTTTCTTGTTGTAGCTCCTTTTTTTTTTTTTTTTTACA  950

seq1  TTTA-TTTATTATTATACATCAGTATACTGTAGCTGACTTAAGACGCACC  997
      |||| ||||||||||||||||||||||||||||||||||  |||||||||
seq2  TTTATTTTATTATTATACATCAGTATACTGTAGCTGACT--AGACGCACC  998

seq1  AGATCTCATTACAGGTGGTTGTGAGGTGGTTGCTGGGATTTGAACTC-AG  1046
      |||||||||||||||||||||||||   |||||| ||||| || ||| ||
seq2  AGATCTCATTACAGGTGGTTGTGAG--TGTTGCT-GGATTGGACCTCAAG  1045

seq1  GACCTTTGGAAGAGCAGTCAGT-ACTCTTACCTGCTGAGCCATCTCTCCA  1095
      || |||  | |||||| ||||| |||| ||||||||||  ||  ||||||
seq2  GAACTT--GGAGAGCA-TCAGTAACTC-TACCTGCTGA--CA--TCTCCA  1087

seq1  GCCC  1099
      ||||
seq2  GCCC  1091