BAC Information

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BAC

Clone NameB6Ng01-328L14
Chromosome7 (Build37)
Map Location 121,576,166 - 121,694,196
singlet/doubletdoublet
Overlap genePde3b, Cyp2r1
Upstream geneMlstd2, EG434228, Spon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik
Downstream geneCalca, LOC100043295, Calcb, Insc, EG627967, LOC668472, Sox6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328L14.bB6Ng01-328L14.g
ACCGA115903GA115904
length1,216820
definitionB6Ng01-328L14.b B6Ng01-328L14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,692,972 - 121,694,196)(121,576,166 - 121,576,717)
sequence
gaattcagagatggaatcaaaaaatttaaagcccatgatctgataaaagg
aaataaaggaatatgtttcttcaatgaagtgatagtttctaatctttgag
atttgagaaactcctctcataatacagtatcttctagcatactttaattt
ctcagtttcctgaatgccacctgaatattagatattattaaatgatttag
taaatgatttttaaacatttgctttttctgttcagggagaagacattgtc
ttggagaacagctggctcgaatggaaatgttcttgttttttacatcatta
cttcagcaatttcatttgcattttccacatgaactagttccaaatctgaa
gcccaggttgggcatgacattacaaccccagccctacctcatctgtgcag
aaagacgctgaaagtgcaaaatgtattggggaataaccttgttgaatcac
aataatggtgtttgggccaaagccacatttttataaagccaagtaaacac
aaatacactgtttaaaatagtactagagcaataacaagcattaattatgt
tattttttttaatttccatgaattcttattgtagattgaagagcacaaag
gtacaggtgttatgaagacacttagaagggccatggatgctctaaacaaa
gctcttgctaggataaggttcttctcatctgtctccatcctaaggaactt
tactccctaactaacacccttaatggtgaggtgtattcccccacacatac
acataattaaaaataatagaaatagtcttttttaaaagtaggaagaacat
gtatttaactttaaattgtattatctggtaaaaatttcctagttctgtgg
ttcaaattaggagtttttggaatctgatgtattaagatatttctagttcc
aagggaaagaaaatcctgggcaaacataccaacaaatggaaatttagagg
taatatgaaaggattaaggttaggatagcatagatgattcatgatttaat
tatttatttacatcctgatcaaaacttctctctcctctcttcagtctctt
ctctaactcacttttcccatcactcaacttgcccttcttctcaagaaagg
gaaggctagagtcagaccagccctgctccccacttaagggagtcccaatg
gagagcagctacacaactgttacatattgtacagacagatagttcatccc
agccaggctcttctct
gaattccaaactgtattttctaaaattaaagtagtcagtttttgaaaaat
ttattttttatagaaaatctgtgatagtcttaccatataatgagtgctca
ctaaagatatgcaataaaatccaataatatgtagaagtaataaataaaag
tgtctcagggattattaattaaaaaaatccattttatggatttttgtgat
gctgtgactttttttcagtgtagagtggttttacccttgtacctaatttt
gacttgtaatttttttcctttgaggtgatctctttgaattgtatgatgct
caggttcagtaaacaaaggtgtgtcattccaacacctgtataagtcttca
ttgtagctatatttattattgactccccaaatgaaaacaggtcaaatgac
cataaataagagtaaataaggtggtgtatttatgccacagaattctacag
agaactaaaactaatgatacaatgttaataaattttatagacattgtttt
cagaaaacaacagatctaaaagatgatgtattacataattcaactcatat
gaaattcaaaaagtagaaaacacagaaatcagaatagttgcaactgtcta
gacactaatggctcagagtgaatacaaatttcttctgaagtgttaggaat
taggtatttttagacttaggtggtgactacaggcatatacctatgaaaat
gttcaagaatcatatatatatagaatcaacatatttttgtatgtttggat
gctccaattaaaaaattacctccaaattggggaaagaaaacagaagcttt
aatctagaatttgggaggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_121692972_121694196
seq2: B6Ng01-328L14.b_48_1263 (reverse)

seq1  AGAG-AGAGCCTGCATGGGATGGACCTATACTGTCTGTAC-ATATGTAAC  48
      |||| ||||||||  |||||| || |||| |||||||||| |||||||||
seq2  AGAGAAGAGCCTGGCTGGGAT-GAACTAT-CTGTCTGTACAATATGTAAC  48

seq1  AGTTGTGTAGCTGGCTCTTCATTTGGGACT-CCTAAAGT-GGGAGCAGGG  96
      |||||||||||| ||||| || |||||||| ||| |||| ||||||||||
seq2  AGTTGTGTAGCT-GCTCTCCA-TTGGGACTCCCTTAAGTGGGGAGCAGGG  96

seq1  GCTTGGTCTGACTCCTAGGCCTTCCCTTTCTTGAGAAGAAGGGCAAGTTG  146
         |||||||||| ||| ||||||||||||||||||||||||||||||||
seq2  --CTGGTCTGACT-CTA-GCCTTCCCTTTCTTGAGAAGAAGGGCAAGTTG  142

seq1  AGTGATGGGGAAAAGGTGAGGTTAGAGGAAGAGACTGGAAGAGAGGAGAG  196
      |||||||||  ||| |||| |||||| ||||||||| |||||||||||||
seq2  AGTGATGGG--AAAAGTGA-GTTAGA-GAAGAGACT-GAAGAGAGGAGAG  187

seq1  AGAAGTTTTGATCAGGATGTAAATAAATAATTAAATCATGAATCATCTAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTTGATCAGGATGTAAATAAATAATTAAATCATGAATCATCTAT  237

seq1  GCTATCCTAACCTTAATCCTTTCATATTACCTCTAAATTTCCATTTGTTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCTAACCTTAATCCTTTCATATTACCTCTAAATTTCCATTTGTTG  287

seq1  GTATGTTTGCCCAGGATTTTCTTTCCCTTGGAACTAGAAATATCTTAATA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTGCCCAGGATTTTCTTTCCCTTGGAACTAGAAATATCTTAATA  337

seq1  CATCAGATTCCAAAAACTCCTAATTTGAACCACAGAACTAGGAAATTTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGATTCCAAAAACTCCTAATTTGAACCACAGAACTAGGAAATTTTT  387

seq1  ACCAGATAATACAATTTAAAGTTAAATACATGTTCTTCCTACTTTTAAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATAATACAATTTAAAGTTAAATACATGTTCTTCCTACTTTTAAAA  437

seq1  AAGACTATTTCTATTATTTTTAATTATGTGTATGTGTGGGGGAATACACC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTATTTCTATTATTTTTAATTATGTGTATGTGTGGGGGAATACACC  487

seq1  TCACCATTAAGGGTGTTAGTTAGGGAGTAAAGTTCCTTAGGATGGAGACA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATTAAGGGTGTTAGTTAGGGAGTAAAGTTCCTTAGGATGGAGACA  537

seq1  GATGAGAAGAACCTTATCCTAGCAAGAGCTTTGTTTAGAGCATCCATGGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAAGAACCTTATCCTAGCAAGAGCTTTGTTTAGAGCATCCATGGC  587

seq1  CCTTCTAAGTGTCTTCATAACACCTGTACCTTTGTGCTCTTCAATCTACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAAGTGTCTTCATAACACCTGTACCTTTGTGCTCTTCAATCTACA  637

seq1  ATAAGAATTCATGGAAATTAAAAAAAATAACATAATTAATGCTTGTTATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAATTCATGGAAATTAAAAAAAATAACATAATTAATGCTTGTTATT  687

seq1  GCTCTAGTACTATTTTAAACAGTGTATTTGTGTTTACTTGGCTTTATAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGTACTATTTTAAACAGTGTATTTGTGTTTACTTGGCTTTATAAA  737

seq1  AATGTGGCTTTGGCCCAAACACCATTATTGTGATTCAACAAGGTTATTCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCTTTGGCCCAAACACCATTATTGTGATTCAACAAGGTTATTCC  787

seq1  CCAATACATTTTGCACTTTCAGCGTCTTTCTGCACAGATGAGGTAGGGCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACATTTTGCACTTTCAGCGTCTTTCTGCACAGATGAGGTAGGGCT  837

seq1  GGGGTTGTAATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTGTAATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCA  887

seq1  TGTGGAAAATGCAAATGAAATTGCTGAAGTAATGATGTAAAAAACAAGAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAATGCAAATGAAATTGCTGAAGTAATGATGTAAAAAACAAGAA  937

seq1  CATTTCCATTCGAGCCAGCTGTTCTCCAAGACAATGTCTTCTCCCTGAAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCATTCGAGCCAGCTGTTCTCCAAGACAATGTCTTCTCCCTGAAC  987

seq1  AGAAAAAGCAAATGTTTAAAAATCATTTACTAAATCATTTAATAATATCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGCAAATGTTTAAAAATCATTTACTAAATCATTTAATAATATCT  1037

seq1  AATATTCAGGTGGCATTCAGGAAACTGAGAAATTAAAGTATGCTAGAAGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAGGTGGCATTCAGGAAACTGAGAAATTAAAGTATGCTAGAAGA  1087

seq1  TACTGTATTATGAGAGGAGTTTCTCAAATCTCAAAGATTAGAAACTATCA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTATTATGAGAGGAGTTTCTCAAATCTCAAAGATTAGAAACTATCA  1137

seq1  CTTCATTGAAGAAACATATTCCTTTATTTCCTTTTATCAGATCATGGGCT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTGAAGAAACATATTCCTTTATTTCCTTTTATCAGATCATGGGCT  1187

seq1  TTAAATTTTTTGATTCCATCTCTGAATTC  1225
      |||||||||||||||||||||||||||||
seq2  TTAAATTTTTTGATTCCATCTCTGAATTC  1216

seq1: chr7_121576166_121576717
seq2: B6Ng01-328L14.g_331_883

seq1  CTTTGAGGTGATCTCTTTGAATTGTATGATGCTCAGGTTCAGTAAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGTGATCTCTTTGAATTGTATGATGCTCAGGTTCAGTAAACAAA  50

seq1  GGTGTGTCATTCCAACACCTGTATAAGTCTTCATTGTAGCTATATTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTCATTCCAACACCTGTATAAGTCTTCATTGTAGCTATATTTATT  100

seq1  ATTGACTCCCCAAATGAAAACAGGTCAAATGACCATAAATAAGAGTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTCCCCAAATGAAAACAGGTCAAATGACCATAAATAAGAGTAAAT  150

seq1  AAGGTGGTGTATTTATGCCACAGAATTCTACAGAGAACTAAAACTAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGTGTATTTATGCCACAGAATTCTACAGAGAACTAAAACTAATGA  200

seq1  TACAATGTTAATAAATTTTATAGACATTGTTTTCAGAAAACAACAGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGTTAATAAATTTTATAGACATTGTTTTCAGAAAACAACAGATCT  250

seq1  AAAAGATGATGTATTACATAATTCAACTCATATGAAATTCAAAAAGTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGATGTATTACATAATTCAACTCATATGAAATTCAAAAAGTAGA  300

seq1  AAACACAGAAATCAGAATAGTTGCAACTGTCTAGACACTAATGGCTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGAAATCAGAATAGTTGCAACTGTCTAGACACTAATGGCTCAGA  350

seq1  GTGAATACAAATTTCTTCTGAAGTGTTAGGAATTAGGTATTTTTAGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATACAAATTTCTTCTGAAGTGTTAGGAATTAGGTATTTTTAGACTT  400

seq1  AGGTGGTGACTACAGGCATATACCTATGAAAATGTTCAAGAATCATATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTGACTACAGGCATATACCTATGAAAATGTTCAAGAATCATATAT  450

seq1  ATATAGAATCAACATATTTTTGTATGTTTGGATGCTCCAATTAAAAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAATCAACATATTTTTGTATGTTTGGATGCTCCAATTAAAAAATT  500

seq1  ACCTCCAAATTGGGGAAAGAAAACAGAAGCTTTAATCTAGAATTT-GGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACCTCCAAATTGGGGAAAGAAAACAGAAGCTTTAATCTAGAATTTGGGAG  550

seq1  GTA  552
      |||
seq2  GTA  553