BAC Information

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BAC

Clone NameB6Ng01-328M20
Chromosome7 (Build37)
Map Location 60,093,056 - 60,197,218
singlet/doubletdoublet
Overlap geneLOC100040692
Upstream geneLOC100040608, Gas2, 1700015G11Rik, EG668783, EG620782
Downstream geneGm1865, LOC100040718, LOC668789
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328M20.bB6Ng01-328M20.g
ACCGA115963GA115964
length1,212885
definitionB6Ng01-328M20.b B6Ng01-328M20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,093,056 - 60,094,283)(60,196,334 - 60,197,218)
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatc
agtctgtcttaaaggcaacccttagtgtatcttgtatccaaatcctcttg
ttgaggggggtcatataaccatattcctagacaccactaaaatatcaact
agggttagtgctctttatctcaagataattttcaagctatttttggttta
aagcattgaaaaaatatttcaaaaaaaaactagttcatctgcaatatggt
gattttatcattggctattctagtttttcagttggttttgtaggaattat
atagtttgcaaacagacttggaaaaacttcagctcagtaatttgtattgg
tgctaagatgccgcagccatctttaagcccactctagcagggtgtttggt
ccattatttcatgtgggagggtgaaagacagacctctacattagtttata
aaattaattatttaaacacacaaattgaaatttaattcaagttattatat
tagtgatgatgataccagtcagacttcaatccaaccaactgtcaaacaaa
ttgaactactgtctctatagatacagtattgttcaaagcatgtttacatt
actctcaaatttgcatggtgtggtagactcaaagagtattccataagtta
cacacgctcttcaactgatgccttttgactgctgtatcactaatagttaa
gtgggcagatattcttttatcattgcataattgaggaaccagaaacctgg
tagataaaatgtattctgacacataaccttgaaagttcagagaaatatgt
atgaacataagaaattaaaataaatggcatgttcatctaattttttgtgt
aataattaatgtctgtcaggaaataactccctcagggtctctaagtcaca
tgaatttaaaacctgcttctcatctctaaagatttttttaaatatgtcat
ttgaacaggagttgaagtttagactatagtatgatgactatttttggtgt
acttgactatatctgaatgactatgatcaggaatggagggcatatctggg
gagaatcttctctggtttgaggtggggtgatcactgggaaaacacacatt
ctttgatcgaatctgagtctgaaagacacacctttatctggctcaacgtc
ttgaagtcttatgtgcaagtgtcaacagagttagccttgtttcttttcct
aacttgcccttt

gaattcatgttaggaatatgctttgttgatttaaattgattgggatttaa
tatctcagttcagccatttattaaattgataaaaaattttgggaattttt
cttaccaccctgctcattatatttttctatctatgaaaggagctaacaat
tactatgatgttttgtcttaaattctaatatctacttgcctttaattata
ttttattctagtttgtgcatggtttcatgaatacctaaccatatcaaaac
aataaacaatattatttaaaaacattttactgaaatagactctttttttg
cttaatgtatacatatatatatatatatatatatatatatatacacacac
acacacacatatattcctacatagttaacatttataaagtatgatgaata
aatctttttattgaataaatatagtaaaaaaaatagaaaaacatgatgct
agtgtttcattaactttatatgaagatctattaggattctttggcgttta
acaggaaaaatgttccaagaggctttattgcagtgatgatacatggcaca
gcaccatagtaccataagtgtgactagtaatattttcaaagacatcaaga
aggcttgagggataatgggcattgtcaccttagactaccatgggcttcaa
gaaaacaagttttttttggtttatttgtttgtttttttcaaagattgcag
ggttgaaatagcatgagaacactgtttacaactttggagaaggaactcac
tttttgatgttataatagtgccccatagatactcaggcacctggaaacag
gaagtttctatttcttctgtgttgtgcatagccctgggctatttattatt
attattattattattattattattattgttattgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_60093056_60094283
seq2: B6Ng01-328M20.b_47_1258

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAACACCTGAAAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAACACCTGAAAAAATC  50

seq1  AGTCTGTCTTAAAGGCAACCCTTAGTGTATCTTGTATCCAAATCCTCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTCTTAAAGGCAACCCTTAGTGTATCTTGTATCCAAATCCTCTTG  100

seq1  TTGAGGGGGGGTCATATAACCATATTCCTAGACACCACTAAAATATCAAC  150
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGA-GGGGGGTCATATAACCATATTCCTAGACACCACTAAAATATCAAC  149

seq1  TAGGGTTAGTGCTCTTTATCTCAAGATAATTTTCAAGCTATTTTTGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTAGTGCTCTTTATCTCAAGATAATTTTCAAGCTATTTTTGGTTT  199

seq1  AAAGCATTGAAAAAATATTTCAAAAAAAAACTAGTTCATCTGCAATATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTGAAAAAATATTTCAAAAAAAAACTAGTTCATCTGCAATATGG  249

seq1  TGATTTTATCATTGGCTATTCTAGTTTTTCAGTTGGTTTTGTAGGAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTATCATTGGCTATTCTAGTTTTTCAGTTGGTTTTGTAGGAATTA  299

seq1  TATAGTTTGCAAACAGACTTGGAAAAACTTCAGCTCAGTAATTTGTATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTGCAAACAGACTTGGAAAAACTTCAGCTCAGTAATTTGTATTG  349

seq1  GTGCTAAGATGCCGCAGCCATCTTTAAGCCCACTCTAGCAGGGTGTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAAGATGCCGCAGCCATCTTTAAGCCCACTCTAGCAGGGTGTTTGG  399

seq1  TCCATTATTTCATGTGGGAGGGTGAAAGACAGACCTCTACATTAGTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATTTCATGTGGGAGGGTGAAAGACAGACCTCTACATTAGTTTAT  449

seq1  AAAATTAATTATTTAAACACACAAATTGAAATTTAATTCAAGTTATTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAATTATTTAAACACACAAATTGAAATTTAATTCAAGTTATTATA  499

seq1  TTAGTGATGATGATACCAGTCAGACTTCAATCCAACCAACTGTCAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGATGATGATACCAGTCAGACTTCAATCCAACCAACTGTCAAACAA  549

seq1  ATTGAACTACTGTCTCTATAGATACAGTATTGTTCAAAGCATGTTTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACTACTGTCTCTATAGATACAGTATTGTTCAAAGCATGTTTACAT  599

seq1  TACTCTCAAATTTGCATGGTGTGGTAGACTCAAAGAGTATTCCATAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCAAATTTGCATGGTGTGGTAGACTCAAAGAGTATTCCATAAGTT  649

seq1  ACACACGCTCTTCAACTGATGCCTTTTGACTGCTGTATCACTAATAGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGCTCTTCAACTGATGCCTTTTGACTGCTGTATCACTAATAGTTA  699

seq1  AGTGGGCAGATATTCTTTTATCATTGCATAATTGAGGAACCAGAAACCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCAGATATTCTTTTATCATTGCATAATTGAGGAACCAGAAACCTG  749

seq1  GTAGATAAAATGTATTCTGACACATAACCTTGAAAGTTCAGAGAAATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATAAAATGTATTCTGACACATAACCTTGAAAGTTCAGAGAAATATG  799

seq1  TATGAACATAAGAAATTAAAATAAATGGCATGTTCATCTAATTTTTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACATAAGAAATTAAAATAAATGGCATGTTCATCTAATTTTTTGTG  849

seq1  TAATAATTAATGTCTGTCAGGAAATAACTCCCTCAGGGTCTCTAAGTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTAATGTCTGTCAGGAAATAACTCCCTCAGGGTCTCTAAGTCAC  899

seq1  ATGAATTTAAAACCTGCTTCTCATCTCTAAAGATTTTTTTAAATATGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTAAAACCTGCTTCTCATCTCTAAAGATTTTTTTAAATATGTCA  949

seq1  TTTGAACAGGGAGTTGAAGTTTAGACTATAGTATGATGACTATTTTTTGG  1000
      |||||||| ||||||||||||||||||||||||||||||||||||||  |
seq2  TTTGAACA-GGAGTTGAAGTTTAGACTATAGTATGATGACTATTTTT--G  996

seq1  TTGTTAACTTGACTATTATCTGAATGAACTATGATCCAGGAATGGAGGGC  1050
       |||  ||||||||| |||||||||| |||||||| ||||||||||||||
seq2  GTGT--ACTTGACTA-TATCTGAATG-ACTATGAT-CAGGAATGGAGGGC  1041

seq1  ATATCT-GTGAGAATCTTTCTTCTTGGTTTGAAGTGGGTGAATCAACTGG  1099
      |||||| | ||||||| ||||   |||||||| |||||   ||||   ||
seq2  ATATCTGGGGAGAATC-TTCT--CTGGTTTGAGGTGGGGTGATCACTGGG  1088

seq1  AAAACACACA-TCTTTGATCCAGATCTTGAGTCTGGAAGACACACCTTTA  1148
      |||||||||| ||||||||| | ||| |||||||| ||||||||||||| 
seq2  AAAACACACATTCTTTGATCGA-ATC-TGAGTCTGAAAGACACACCTTT-  1135

seq1  ATCTGGCTCAAACCTTCCCCTGGAAGTC-TATGTGAAGATGTAGAAGAAG  1197
      |||||||||||     |  || |||||| |||||| |  |||  |   ||
seq2  ATCTGGCTCAA-----CGTCTTGAAGTCTTATGTGCAAGTGTCAACAGAG  1180

seq1  TAAGCTTTTGTTCTTTTCCT-ACTTGCCCTTT  1228
      | ||| ||  |||||||||| |||||||||||
seq2  TTAGCCTTGTTTCTTTTCCTAACTTGCCCTTT  1212


seq1: chr7_60196334_60197218
seq2: B6Ng01-328M20.g_67_951 (reverse)

seq1  ACAATAATAATAATAATAATAATAATAATAATAATAATAATAAATAGCCC  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAACAATAATAATAATAATAATAATAATAATAATAATAAATAGCCC  50

seq1  AGGGCTATGCACAACACAGAAGAAATAGAAACTTCCTGTTTCCAGGTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTATGCACAACACAGAAGAAATAGAAACTTCCTGTTTCCAGGTGCC  100

seq1  TGAGTATCTATGGGGCACTATTATAACATCAAAAAGTGAGTTCCTTCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATCTATGGGGCACTATTATAACATCAAAAAGTGAGTTCCTTCTCC  150

seq1  AAAGTTGTAAACAGTGTTCTCATGCTATTTCAACCCTGCAATCTTTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGTAAACAGTGTTCTCATGCTATTTCAACCCTGCAATCTTTGAAA  200

seq1  AAAACAAACAAATAAACCAAAAAAAACTTGTTTTCTTGAAGCCCATGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACAAATAAACCAAAAAAAACTTGTTTTCTTGAAGCCCATGGTA  250

seq1  GTCTAAGGTGACAATGCCCATTATCCCTCAAGCCTTCTTGATGTCTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGGTGACAATGCCCATTATCCCTCAAGCCTTCTTGATGTCTTTGA  300

seq1  AAATATTACTAGTCACACTTATGGTACTATGGTGCTGTGCCATGTATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTACTAGTCACACTTATGGTACTATGGTGCTGTGCCATGTATCAT  350

seq1  CACTGCAATAAAGCCTCTTGGAACATTTTTCCTGTTAAACGCCAAAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAATAAAGCCTCTTGGAACATTTTTCCTGTTAAACGCCAAAGAAT  400

seq1  CCTAATAGATCTTCATATAAAGTTAATGAAACACTAGCATCATGTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAGATCTTCATATAAAGTTAATGAAACACTAGCATCATGTTTTTC  450

seq1  TATTTTTTTTACTATATTTATTCAATAAAAAGATTTATTCATCATACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTTACTATATTTATTCAATAAAAAGATTTATTCATCATACTTT  500

seq1  ATAAATGTTAACTATGTAGGAATATATGTGTGTGTGTGTGTGTATATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTTAACTATGTAGGAATATATGTGTGTGTGTGTGTGTATATATA  550

seq1  TATATATATATATATATATATATGTATACATTAAGCAAAAAAAGAGTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATGTATACATTAAGCAAAAAAAGAGTCTA  600

seq1  TTTCAGTAAAATGTTTTTAAATAATATTGTTTATTGTTTTGATATGGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTAAAATGTTTTTAAATAATATTGTTTATTGTTTTGATATGGTTA  650

seq1  GGTATTCATGAAACCATGCACAAACTAGAATAAAATATAATTAAAGGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCATGAAACCATGCACAAACTAGAATAAAATATAATTAAAGGCAA  700

seq1  GTAGATATTAGAATTTAAGACAAAACATCATAGTAATTGTTAGCTCCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATATTAGAATTTAAGACAAAACATCATAGTAATTGTTAGCTCCTTT  750

seq1  CATAGATAGAAAAATATAATGAGCAGGGTGGTAAGAAAAATTCCCAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATAGAAAAATATAATGAGCAGGGTGGTAAGAAAAATTCCCAAAAT  800

seq1  TTTTTATCAATTTAATAAATGGCTGAACTGAGATATTAAATCCCAATCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCAATTTAATAAATGGCTGAACTGAGATATTAAATCCCAATCAA  850

seq1  TTTAAATCAACAAAGCATATTCCTAACATGAATTC  885
      |||||||||||||||||||||||||||||||||||
seq2  TTTAAATCAACAAAGCATATTCCTAACATGAATTC  885


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