BAC Information

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BAC

Clone NameB6Ng01-329E22
Chromosome7 (Build37)
Map Location 8,449,408 - 8,616,855
singlet/doubletdoublet
Overlap geneLOC100042703, LOC100041967, LOC100042724, LOC100041977
Upstream geneLOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961
Downstream geneLOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329E22.bB6Ng01-329E22.g
ACCGA116305GA116306
length8211,101
definitionB6Ng01-329E22.b B6Ng01-329E22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,449,408 - 8,450,228)(8,615,749 - 8,616,855)
sequence
gaattctgtcaaatgtaaagttggtacatacccaccaaatattgggttat
agtgcatgtgtctagttttagaatcactctcactggttgctctagtgata
tcaggaagtatcatatctactgaacttccctacagtgtccataaaatctt
gcactcattcactttcttcattttctctcagagaactaaactctctaatt
attacaattttattctttattttgctttcatggagatggccctctggtaa
cagccaaaaaatgttgataaggcagttgaatccaccactttgtgtagaaa
aatgagatctaggaagacagggttacacataaaaaccatctaccaaatca
aataatcaatgagaaacacagactaactaaataatcagcaaagatgaaat
cagaacatattttctgatttccagtaagagcacacacataagaaaatact
tacttttttcatctgttcttcaatctactggccaatagtctaaggaggaa
atgttccttttctgctgtcaaataaaaatatattatatccaacaatgatc
agaagcccagggactctctggatgaattgggaatattgggaagaagctga
ggaggagggtgaccagcattctcaacaaacctggacaagcaagatctctc
aggcattgagcctctaaccagagatcatacactagctgatgtgaagcccc
caacaaatatgcagcataagactgcctggtctagcatcagtgggagagac
acacctaaccccagagagacttaagtctccagggattgggaagggctggg
cgttggggaggtagggatatc
gaattcctaaatatttgttcagaaatatgatttttccctgatcttttggg
tagaatttctctctggtctcattaaaatgatataaatcttgggtacaaaa
atacatccaaggatccctgcactggatgccaagatggagaagatctccac
agcaaccatgtgtttgcccttggtgctatggtagacagggaggaagttga
cccagacactgcagaacactagcatgctgaaggtcaagaacttggcttca
ttgaatgtgtcaggcagattcttggccaagaaagccagagagaagcttcc
aagtgccaggcaggccaaatatcccaggatacagtagaatgcagtaactg
agcccttgtagaacacaatgatgatgtggccatggagagtgtgttcatca
atatcaacaaagggaggagaaactgctagccagattgcacacagaacaca
ttggagtagggaacatatgggaataatgtagttgggtgtccctgatacca
gaaagtttctcaatcttcttcctgggtctgtgactttgaaagcaagaacc
acagtgactgttttggccagaactttggaaacagccacagtgaatacaat
tccaaatgtgatttgttgtaagacacaggtggctctgttaggatgaccaa
tgaagaaaaaagagcacagaaaacaggacatgagtgatatcaataatatg
tagctgaggattctgttattgtcttcacaataggagtgtcatgatgcttc
acaaagacacaaagtaccacagctgtgaatgcagagaaacagaaggccat
taaggccagtgccatccccaaagggtctttcatagcttaaggaaggtgac
accttttctgaatacatttgttctgttatgtattggcatattggtattct
ggacaattcacacattgatccatatctgattccaaagggaaagcttagtt
aggtcttaattacaaatttattgacaggtatttcaagtaagggtaatgag
agagctttgaatgctgccttgatgctgagcatgtaatgtgagataatgtt
tgcctgagcattgccttcaatccataataatcataagattcacgaataaa
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8449408_8450228
seq2: B6Ng01-329E22.b_44_864

seq1  GAATTCTGTCAAATGTAAAGTTGGTACATACCCACCAAATATTGGGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCAAATGTAAAGTTGGTACATACCCACCAAATATTGGGTTAT  50

seq1  AGTGCATGTGTCTAGTTTTAGAATCACTCTCACTGGTTGCTCTAGTGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATGTGTCTAGTTTTAGAATCACTCTCACTGGTTGCTCTAGTGATA  100

seq1  TCAGGAAGTATCATATCTACTGAACTTCCCTACAGTGTCCATAAAATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGTATCATATCTACTGAACTTCCCTACAGTGTCCATAAAATCTT  150

seq1  GCACTCATTCACTTTCTTCATTTTCTCTCAGAGAACTAAACTCTCTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCATTCACTTTCTTCATTTTCTCTCAGAGAACTAAACTCTCTAATT  200

seq1  ATTACAATTTTATTCTTTATTTTGCTTTCATGGAGATGGCCCTCTGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATTTTATTCTTTATTTTGCTTTCATGGAGATGGCCCTCTGGTAA  250

seq1  CAGCCAAAAAATGTTGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAAAAATGTTGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAA  300

seq1  AATGAGATCTAGGAAGACAGGGTTACACATAAAAACCATCTACCAAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATCTAGGAAGACAGGGTTACACATAAAAACCATCTACCAAATCA  350

seq1  AATAATCAATGAGAAACACAGACTAACTAAATAATCAGCAAAGATGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAATGAGAAACACAGACTAACTAAATAATCAGCAAAGATGAAAT  400

seq1  CAGAACATATTTTCTGATTTCCAGTAAGAGCACACACATAAGAAAATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACATATTTTCTGATTTCCAGTAAGAGCACACACATAAGAAAATACT  450

seq1  TACTTTTTTCATCTGTTCTTCAATCTACTGGCCAATAGTCTAAGGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTTCATCTGTTCTTCAATCTACTGGCCAATAGTCTAAGGAGGAA  500

seq1  ATGTTCCTTTTCTGCTGTCAAATAAAAATATATTATATCCAACAATGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCTTTTCTGCTGTCAAATAAAAATATATTATATCCAACAATGATC  550

seq1  AGAAGCCCAGGGACTCTCTGGATGAATTGGGAATATTGGGAAGAAGCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCCAGGGACTCTCTGGATGAATTGGGAATATTGGGAAGAAGCTGA  600

seq1  GGAGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTC  650

seq1  AGGCATTGAGCCTCTAACCAGAGATCATACACTAGCTGATGTGAAGCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTGAGCCTCTAACCAGAGATCATACACTAGCTGATGTGAAGCCCC  700

seq1  CAACAAATATGCAGCATAAGACTGCCTGGTCTAGCATCAGTGGGAGAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATATGCAGCATAAGACTGCCTGGTCTAGCATCAGTGGGAGAGAC  750

seq1  ACACCTAACCCCAGAGAGACTTAAGTCTCCAGGGATTGGGAAGGGCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTAACCCCAGAGAGACTTAAGTCTCCAGGGATTGGGAAGGGCTGGG  800

seq1  CGTTGGGGAGGTAGGGATATC  821
      |||||||||||||||||||||
seq2  CGTTGGGGAGGTAGGGATATC  821

seq1: chr7_8615749_8616855
seq2: B6Ng01-329E22.g_67_1167 (reverse)

seq1  TTTTATTTCCGTTAAATCTTTATGAATATTATGGATTGAAAGCAATGCTC  50
      |||||||  || | |||| |||||| |||||||||||||| |||||||||
seq2  TTTTATT--CG-TGAATC-TTATGATTATTATGGATTGAAGGCAATGCTC  46

seq1  AG--CAACAATATCCTTCACATTACATGCTCAGCATCAAAGGCAGCATTT  98
      ||   |||| ||||  ||||||||||||||||||||| ||||||||| ||
seq2  AGGCAAACATTATC--TCACATTACATGCTCAGCATC-AAGGCAGCA-TT  92

seq1  CAAGGCTTCTCTCATTACCCTTACTTGAAATACCTTGTCAATAAAATTTG  148
      ||| || ||||||||||||||||||||||||||| ||||||| |||||||
seq2  CAAAGC-TCTCTCATTACCCTTACTTGAAATACC-TGTCAAT-AAATTTG  139

seq1  TAATTAAGACCTAACTAAGCTTTCCTTTGGAAATCAGATATGGATCAATG  198
      ||||||||||||||||||||||||| || | |||||||||||||||||||
seq2  TAATTAAGACCTAACTAAGCTTTCCCTTTGGAATCAGATATGGATCAATG  189

seq1  TGTGAATTGTCCAGAATACCAATATGCCAATACATAACAGAACAAATGTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTGTCCAGAATACCAATATGCCAATACATAACAGAACAAATGTA  239

seq1  TTCAG-AAAGGTGTCACCTTCC-TAAGCTATG-AAGACCCTTTGGGGATG  295
      ||||| |||||||||||||||| ||||||||| |||||||||||||||||
seq2  TTCAGAAAAGGTGTCACCTTCCTTAAGCTATGAAAGACCCTTTGGGGATG  289

seq1  GCACTGGCCTTAATGGCCTTCTGTTTCTCTGCATTCACAGCTGTGGTACT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGCCTTAATGGCCTTCTGTTTCTCTGCATTCACAGCTGTGGTACT  339

seq1  TTGTGTCTTTGTGAAGCATCATGACACTCCTATTGTGAAGACAATAACAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTTTGTGAAGCATCATGACACTCCTATTGTGAAGACAATAACAG  389

seq1  AATCCTCAGCTACATATTATTGATATCACTCATGTCCTGTTTTCTGTGCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCAGCTACATATTATTGATATCACTCATGTCCTGTTTTCTGTGCT  439

seq1  CTTTTTTCTTCATTGGTCATCCTAACAGAGCCACCTGTGTCTTACAACAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCTTCATTGGTCATCCTAACAGAGCCACCTGTGTCTTACAACAA  489

seq1  ATCACATTTGGAATTGTATTCACTGTGGCTGTTTCCAAAGTTCTGGCCAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATTTGGAATTGTATTCACTGTGGCTGTTTCCAAAGTTCTGGCCAA  539

seq1  AACAGTCACTGTGGTTCTTGCTTTCAAAGTCACAGACCCAGGAAGAAGAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCACTGTGGTTCTTGCTTTCAAAGTCACAGACCCAGGAAGAAGAT  589

seq1  TGAGAAACTTTCTGGTATCAGGGACACCCAACTACATTATTCCCATATGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAACTTTCTGGTATCAGGGACACCCAACTACATTATTCCCATATGT  639

seq1  TCCCTACTCCAATGTGTTCTGTGTGCAATCTGGCTAGCAGTTTCTCCTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACTCCAATGTGTTCTGTGTGCAATCTGGCTAGCAGTTTCTCCTCC  689

seq1  CTTTGTTGATATTGATGAACACACTCTCCATGGCCACATCATCATTGTGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTGATATTGATGAACACACTCTCCATGGCCACATCATCATTGTGT  739

seq1  TCTACAAGGGCTCAGTTACTGCATTCTACTGTATCCTGGGATATTTGGCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAGGGCTCAGTTACTGCATTCTACTGTATCCTGGGATATTTGGCC  789

seq1  TGCCTGGCACTTGGAAGCTTCTCTCTGGCTTTCTTGGCCAAGAATCTGCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCACTTGGAAGCTTCTCTCTGGCTTTCTTGGCCAAGAATCTGCC  839

seq1  TGACACATTCAATGAAGCCAAGTTCTTGACCTTCAGCATGCTAGTGTTCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACATTCAATGAAGCCAAGTTCTTGACCTTCAGCATGCTAGTGTTCT  889

seq1  GCAGTGTCTGGGTCAACTTCCTCCCTGTCTACCATAGCACCAAGGGCAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTCTGGGTCAACTTCCTCCCTGTCTACCATAGCACCAAGGGCAAA  939

seq1  CACATGGTTGCTGTGGAGATCTTCTCCATCTTGGCATCCAGTGCAGGGAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTTGCTGTGGAGATCTTCTCCATCTTGGCATCCAGTGCAGGGAT  989

seq1  CCTTGGATGTATTTTTGTACCCAAGATTTATATCATTTTAATGAGACCAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGATGTATTTTTGTACCCAAGATTTATATCATTTTAATGAGACCAG  1039

seq1  AGAGAAATTCTACCCAAAAGATCAGGGAAAAATCATATTTCTGAACAAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATTCTACCCAAAAGATCAGGGAAAAATCATATTTCTGAACAAAT  1089

seq1  ATTTAGGAATTC  1107
      ||||||||||||
seq2  ATTTAGGAATTC  1101