BAC Information

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BAC

Clone NameB6Ng01-329G10
Chromosome7 (Build37)8 (Build37)
Map Location 51,073,036 - 51,073,13494,968,046 - 94,969,095
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7
Downstream geneKlk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3, EG628904, Atf5, Nup62
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329G10.bB6Ng01-329G10.g
ACCGA116375GA116376
length1521,065
definitionB6Ng01-329G10.b B6Ng01-329G10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(51,073,036 - 51,073,134)(94,968,046 - 94,969,095)
sequence
atgatttaaaatctttcagcaaagagaaccccaagcgtaaatagttctac
taaagggtctctctctctctctttctctctctctctctctctctctctgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttggaggttgtgg
ta
gaattcactttcaggggtaaatataggtagttcagagagattttatgaca
tactgtactggctcttcttccagagacttctttaattactggggtgggga
gggctggggggcagcaaagtgctgacaaagaggggctgggctgcgagcct
ctactgcccacaaggacaggctgggcactgtgcacactgagtgaggacct
cctgccaggcccacagctaacctccctcctcccacctgtcatgggaaggg
tcacctgtagggagctcctctaacctagagaaggtggaatggtacaccct
gcataagagatagataggtaagaagcaggcagcaccctggttgcctggcc
ttccaccagccagtttgggttgaaactcagggtaaaggtgtcttgatcca
actcagcaagaaggtggcttcttgtgctccttcaggggactctagactct
atgctatctcctccacactgagctcaatatgctgctgtgcccaaccctct
actgctggcctctccctcctctgtccccaacccctcaactgacatcagtt
ccacaaaggcaaacctgtggaccaacaaggccctgagaagtcagaataac
aagtatgaagtacttatcctgcttgaccagggtcagaagaggtcagtgaa
cggaatccaggaccatccaggagaagtgactagacctgggcttctctgac
caaacccatggaggctgcacatgtgtggtcccaggtgatgctccactgcc
acccacagtagacagctacagtagagccttgatggtccttatgcaaaaca
cttagcatgcatacccttgggattctgcaagggctcagacccctccacac
acacagtgggagcagctattttgtttgctggcctctctggagagacgctg
ggcttccatcgtctataaaaagaatcctcttttccaaatgagaagcattt
ttttgcacacgttgaacgcatacagttcttcaccggaaactcactcttca
gatgcttcatgctttacggaatccagaaacaatgagaccttcatgacaaa
gttccagtgacaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51073036_51073134
seq2: B6Ng01-329G10.b_108_202 (reverse)

seq1  TACCACACACACACACACACACACACACACACACACACACACACACACAC  50
      |||||||  | |  ||||||||||||||||||||||||||||||||||||
seq2  TACCACAACCTCCAACACACACACACACACACACACACACACACACACAC  50

seq1  ACAGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGA  99
      |||     |||||||||||||||||||||||||||||||||||||||||
seq2  ACA----CAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGA  95

seq1: chr8_94968046_94969095
seq2: B6Ng01-329G10.g_67_1131 (reverse)

seq1  GGTTGTCACTGGGACTTGGTCCTGAA-GTCTCA-TGTTTCTG--ATCCGT  46
      |||||||||||| |||| ||| |||| |||||| ||||||||   |||||
seq2  GGTTGTCACTGGAACTTTGTCATGAAGGTCTCATTGTTTCTGGATTCCGT  50

seq1  -AAGC-TGGAGCATCCTGAGAGTG-GTTTCCGGTGA--GACTGTATGCGT  91
       |||| || ||||||   |||||| |||||||||||   |||||||||||
seq2  AAAGCATGAAGCATCTGAAGAGTGAGTTTCCGGTGAAGAACTGTATGCGT  100

seq1  TC-ACGTGTGC-AAAAAATGCTTCTCATT--GGAAAGAGGATTC-TTTTA  136
      || |||||||| |||||||||||||||||  | ||||||||||| |||||
seq2  TCAACGTGTGCAAAAAAATGCTTCTCATTTGGAAAAGAGGATTCTTTTTA  150

seq1  TAGACGATGGAAGCCCAGCGTCTCTCCAGAGAGGCCAGCAAAC-AAATAG  185
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAGACGATGGAAGCCCAGCGTCTCTCCAGAGAGGCCAGCAAACAAAATAG  200

seq1  CTGCTCCCACTGTGTGTGTGGAGGGGTCTGAGCCCTTGCAGAATCCCAAG  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCCACTGTGTGTGTGGAGGGGTCTGAGCCCTTGCAGAATCCCAAG  250

seq1  GGTATGCATGCTAAGTGTTTTGCATAAGGACCATCAAGGCTCTACTGTAG  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGCATGCTAAGTGTTTTGCATAAGGACCATCAAGGCTCTACTGTAG  300

seq1  CTGTCTACTGTGGGTGGCAGTGGAGCATCACCTGGGACCACACATGTGCA  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTACTGTGGGTGGCAGTGGAGCATCACCTGGGACCACACATGTGCA  350

seq1  GCCTCCATGGGTTTGGTCAGAGAAGCCCAGGTCTAGTCACTTCTCCTGGA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCATGGGTTTGGTCAGAGAAGCCCAGGTCTAGTCACTTCTCCTGGA  400

seq1  TGGTCCTGGATTCCGTTCACTGACCTCTTCTGACCCTGGTCAAGCAGGAT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTGGATTCCGTTCACTGACCTCTTCTGACCCTGGTCAAGCAGGAT  450

seq1  AAGTACTTCATACTTGTTATTCTGACTTCTCAGGGCCTTGTTGGTCCACA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTCATACTTGTTATTCTGACTTCTCAGGGCCTTGTTGGTCCACA  500

seq1  GGTTTGCCTTTGTGGAACTGATGTCAGTTGAGGGGTTGGGGACAGAGGAG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGCCTTTGTGGAACTGATGTCAGTTGAGGGGTTGGGGACAGAGGAG  550

seq1  GGAGAGGCCAGCAGTAGAGGGTTGGGCACAGCAGCATATTGAGCTCAGTG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGCCAGCAGTAGAGGGTTGGGCACAGCAGCATATTGAGCTCAGTG  600

seq1  TGGAGGAGATAGCATAGAGTCTAGAGTCCCCTGAAGGAGCACAAGAAGCC  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAGATAGCATAGAGTCTAGAGTCCCCTGAAGGAGCACAAGAAGCC  650

seq1  ACCTTCTTGCTGAGTTGGATCAAGACACCTTTACCCTGAGTTTCAACCCA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTGCTGAGTTGGATCAAGACACCTTTACCCTGAGTTTCAACCCA  700

seq1  AACTGGCTGGTGGAAGGCCAGGCAACCAGGGTGCTGCCTGCTTCTTACCT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCTGGTGGAAGGCCAGGCAACCAGGGTGCTGCCTGCTTCTTACCT  750

seq1  ATCTATCTCTTATGCAGGGTGTACCATTCCACCTTCTCTAGGTTAGAGGA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTCTTATGCAGGGTGTACCATTCCACCTTCTCTAGGTTAGAGGA  800

seq1  GCTCCCTACAGGTGACCCTTCCCATGACAGGTGGGAGGAGGGAGGTTAGC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTACAGGTGACCCTTCCCATGACAGGTGGGAGGAGGGAGGTTAGC  850

seq1  TGTGGGCCTGGCAGGAGGTCCTCACTCAGTGTGCACAGTGCCCAGCCTGT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCCTGGCAGGAGGTCCTCACTCAGTGTGCACAGTGCCCAGCCTGT  900

seq1  CCTTGTGGGCAGTAGAGGCTCGCAGCCCAGCCCCTCTTTGTCAGCACTTT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGGGCAGTAGAGGCTCGCAGCCCAGCCCCTCTTTGTCAGCACTTT  950

seq1  GCTGCCCCCCAGCCCTCCCCACCCCAGTAATTAAAGAAGTCTCTGGAAGA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCCCCCAGCCCTCCCCACCCCAGTAATTAAAGAAGTCTCTGGAAGA  1000

seq1  AGAGCCAGTACAGTATGTCATAAAATCTCTCTGAACTACCTATATTTACC  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGTACAGTATGTCATAAAATCTCTCTGAACTACCTATATTTACC  1050

seq1  CCTGAAAGTGAATTC  1050
      |||||||||||||||
seq2  CCTGAAAGTGAATTC  1065