BAC Information

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BAC

Clone NameB6Ng01-329N22
Chromosome7 (Build37)
Map Location 5,436,092 - 5,437,218
singlet/doubletsinglet
Overlap geneEG665255
Upstream genePpp1r12c, Tnnt1, Tnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071
Downstream geneEG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329N22.bB6Ng01-329N22.g
ACCGA116713GA116714
length3381,124
definitionB6Ng01-329N22.b B6Ng01-329N22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actctatgagtccctacacgccttgcttagttgattttatgggccatgtt
ctcttggtgtccttgaccactctgattcctatagttcttcctccccctct
tcctcagggtttccaaagctccatctaatgcttggctatgtgtctctgct
gtgctaccagcaggtgctggagaaatactatgtgagcacagaatatcatt
aggaatgttttcaccatacttggatttttggttgcttggttggttgggtg
gttggttggttggttggttggttggatggtaagccaatagaaactaagtt
atttggttttcaagtcgaaaatattttggtttgtgtgg
gaattcaaagacaacaatgctggcttattttttaagacactccttagttg
cctgcagagggtggggagacacattcacatacaagaggagaacatttctt
tatttaaaaaaaaaacatgaggaaaacataatgtgtagtaagagggaaaa
aggaaatttgagaacaataaaaatttgagaaaatttgagatagatattta
tagaataattcttgagaaaaacacctacccacccaaaaaagagggaaaac
aaagaacacaaaacagaaagttcttcccttgagacaatgagaattttttt
tgaaattgagatttcttttttatttattgaaaacagcatgttactctcac
ataatatatcctacctacagttccatttccttctactggaatgtgaccaa
ttctcagttttacttgcaatatatcatagttaatactcttgttcccttcc
caacaacctgttccatcagatccactttctgttacttattaagaaataac
agggttctatgggagaataacaaagtaaaacaagattaaacaaaaattca
gacttcataataggacaaaattttcataacacgttatggtaaatagacat
atgggggtatcttcatggaacactccatattcaaggtcactacacataga
tttatcattttcaacaatattaaaccagtgtctgcatgttccactgtttt
tcataaacagtctttcatgctttacaatgcttatttattcaaggttgtat
ttgttatctgtaatttaaggacatatttttttctgtttcaaatgtcttcc
taacttgcttttctgttgctttaaataaactttgatagtaagtaaagtaa
gtagggagggaaagatttgatatatggcttatatacactcgtgaaagaca
agtgtgggatatgggaaacagacattaaagcatagacattaaagaacaga
tagggtatttccaggaggaatggaacccgggaaagtggataacatttgga
atgttaataaagaaaatatccaattaaaaacaagacggaaaacaagatat
actttactggcttctggtaccatagtggagatggcatacatatattcaat
tacaataagaaatgattccaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_5436092_5437218
seq2: B6Ng01-329N22.g_66_1189 (reverse)

seq1  GAGTTTGAATCATTTTCTTAATTGGTAATTG-ATATATGTATGCCCATCT  49
      ||||| |||||| |||||||  | ||||||| ||||||||||| ||||||
seq2  GAGTTGGAATCA-TTTCTTA--TTGTAATTGAATATATGTATG-CCATCT  46

seq1  -CACTATGGGTACCAG-AGCCAGTAAGTATTATTCTTTGTTTTCTGTCTT  97
       |||||| |||||||| |||||||||  | |||   |||||||| |||||
seq2  CCACTAT-GGTACCAGAAGCCAGTAA--AGTATATCTTGTTTTCCGTCTT  93

seq1  TGTTTTTATTGGATATTTTCTTTATTAACATTTCAAATGTTATCCACTTT  147
        |||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  GTTTTTAATTGGATATTTTCTTTATTAACATTCCAAATGTTATCCACTTT  143

seq1  CCCGGGTTCCATTCCTCCTGGAAATACCCTATCTGTTCTTTAATGTCTAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGTTCCATTCCTCCTGGAAATACCCTATCTGTTCTTTAATGTCTAT  193

seq1  GCTTTAATGTCTGTTTCCCAATAT-CCACACTTGTCTTTCACGAGTGTAT  246
      ||||||||||||||||||| |||| |||||||||||||||||||||||||
seq2  GCTTTAATGTCTGTTTCCC-ATATCCCACACTTGTCTTTCACGAGTGTAT  242

seq1  ATAAGCCATATATCAAATCTTT-CCTTCCTACTTACTTTACTTACTATCA  295
      |||||||||||||||||||||| ||| |||||||||||||||||||||||
seq2  ATAAGCCATATATCAAATCTTTCCCTCCCTACTTACTTTACTTACTATCA  292

seq1  AAGTTTATTTAAAGCAACAGAAAAGCAAGTTAGGAAGACATTTGAAACAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTATTTAAAGCAACAGAAAAGCAAGTTAGGAAGACATTTGAAACAG  342

seq1  AAAAAAATATGTCCTTAAATTACAGATAACAAATACAACCTTGAATAAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATATGTCCTTAAATTACAGATAACAAATACAACCTTGAATAAAT  392

seq1  AAGCATTGTAAAGCATGAAAGACTGTTTATGAAAAACAGTGGAACATGCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTGTAAAGCATGAAAGACTGTTTATGAAAAACAGTGGAACATGCA  442

seq1  GACACTGGTTTAATATTGTTGAAAATGATAAATCTATGTGTAGTGACCTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGGTTTAATATTGTTGAAAATGATAAATCTATGTGTAGTGACCTT  492

seq1  GAATATGGAGTGTTCCATGAAGATACCCCCATATGTCTATTTACCATAAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGGAGTGTTCCATGAAGATACCCCCATATGTCTATTTACCATAAC  542

seq1  GTGTTATGAAAATTTTGTCCTATTATGAAGTCTGAATTTTTGTTTAATCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATGAAAATTTTGTCCTATTATGAAGTCTGAATTTTTGTTTAATCT  592

seq1  TGTTTTACTTTGTTATTCTCCCATAGAACCCTGTTATTTCTTAATAAGTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTACTTTGTTATTCTCCCATAGAACCCTGTTATTTCTTAATAAGTA  642

seq1  ACAGAAAGTGGATCTGATGGAACAGGTTGTTGGGAAGGGAACAAGAGTAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGTGGATCTGATGGAACAGGTTGTTGGGAAGGGAACAAGAGTAT  692

seq1  TAACTATGATATATTGCAAGTAAAACTGAGAATTGGTCACATTCCAGTAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATGATATATTGCAAGTAAAACTGAGAATTGGTCACATTCCAGTAG  742

seq1  AAGGAAATGGAACTGTAGGTAGGATATATTATGTGAGAGTAACATGCTGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATGGAACTGTAGGTAGGATATATTATGTGAGAGTAACATGCTGT  792

seq1  TTTCAATAAATAAAAAAGAAATCTCAATTTCAAAAAAAATTCTCATTGTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATAAATAAAAAAGAAATCTCAATTTCAAAAAAAATTCTCATTGTC  842

seq1  TCAAGGGAAGAACTTTCTGTTTTGTGTTCTTTGTTTTCCCTCTTTTTTGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGAAGAACTTTCTGTTTTGTGTTCTTTGTTTTCCCTCTTTTTTGG  892

seq1  GTGGGTAGGTGTTTTTCTCAAGAATTATTCTATAAATATCTATCTCAAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAGGTGTTTTTCTCAAGAATTATTCTATAAATATCTATCTCAAAT  942

seq1  TTTCTCAAATTTTTATTGTTCTCAAATTTCCTTTTTCCCTCTTACTACAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAATTTTTATTGTTCTCAAATTTCCTTTTTCCCTCTTACTACAC  992

seq1  ATTATGTTTTCCTCATGTTTTTTTTTTAAATAAAGAAATGTTCTCCTCTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTTTTCCTCATGTTTTTTTTTTAAATAAAGAAATGTTCTCCTCTT  1042

seq1  GTATGTGAATGTGTCTCCCCACCCTCTGCAGGCAACTAAGGAGTGTCTTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGAATGTGTCTCCCCACCCTCTGCAGGCAACTAAGGAGTGTCTTA  1092

seq1  AAAAATAAGCCAGCATTGTTGTCTTTGAATTC  1127
      ||||||||||||||||||||||||||||||||
seq2  AAAAATAAGCCAGCATTGTTGTCTTTGAATTC  1124