BAC Information

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BAC

Clone NameB6Ng01-329O11
Chromosome4 (Build37)7 (Build37)
Map Location 94,360,745 - 94,361,730148,946,911 - 148,947,112
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74
Downstream geneTek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411, 2310009E04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329O11.bB6Ng01-329O11.g
ACCGA116734GA116735
length988256
definitionB6Ng01-329O11.b B6Ng01-329O11.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(94,360,745 - 94,361,730)(148,946,911 - 148,947,112)
sequence
gaattcttagctctgtgtacaaagctcaagtccaagtggatcaaggacct
ccacataaaaccagatacacagaatctaatagaacagaaagtggggaaga
gccttgaacacatgggcacaggggaaattttcctgaacagaacatcaatg
gcttatgacctaagatcaaaaatcaacaaataaatgggggctgggaagat
ggctcagtgggtaagagcactgactgctctttggaaggtcatgaattcaa
atcccagcaaccacatggtggctcacaaccacccataatgagatctgatg
tcctcttctggtgtgtctgaagtcagctacagtgtacatatatataataa
taattcttgggggcagagggagcagaattgaccggagcaagctgagttga
ccagagcgagcagaggtcctaaaaattcaattcccagaaaccacatgaag
gctcacaaccatctgcacagctacagtgtactcacataccttaaataaat
aaataaataaataaataaataaatagacaaatgggacctaataaaattgc
aaagcttctgtaaggcaaaggacactgtcaataggacaaaacagcaacca
acagtttgggaaaagatctttaccaatcctacatctagtagagggccaat
atccaaaatatacagaaaacttaagaattagactccagagaaccaaataa
ccctattaaaaatggagctctggggtgtctggttggttgatattgttgtt
cttcctatggggttgcaaaccccttcaaactccttccgtcctttctctta
actcctccattggggaccccgtgctcagtccagtggttggctgtgggcat
ccgcctctgtatttgtctggctctgacagagcttctcaggagacagctat
atcaggctcctgtcagtaagtactttttggcatccacaatagtgtctagg
tttggtgactgtatatggcatggcctccccaggtgggg

tgggtcagcctggactgtagagtaaagcctcatctaaaacaaacaaaaaa
caaaaaaaaaaaacaaaaaaaaaacaataacaacaaataaaaataaaaaa
taaaaaaatcaacccacaaagccacaaaaacaaaacaaaataacaagaaa
ggaagaatgaaagggagaaagaaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagagagagagagagagagagagagagagaggg
agagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_94360745_94361730
seq2: B6Ng01-329O11.b_45_1031

seq1  GAATTCTTAGCTCTGTGTACAAAGCTCAAGTCCAAGTGGATCAAGGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCTCTGTGTACAAAGCTCAAGTCCAAGTGGATCAAGGACCT  50

seq1  CCACATAAAACCAGATACACAGAATCTAATAGAACAGAAAGTGGGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAAAACCAGATACACAGAATCTAATAGAACAGAAAGTGGGGAAGA  100

seq1  GCCTTGAACACATGGGCACAGGGGAAATTTTCCTGAACAGAACATCAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAACACATGGGCACAGGGGAAATTTTCCTGAACAGAACATCAATG  150

seq1  GCTTATGACCTAAGATCAAAAATCAACAAATAAATGGGGGCTGGGAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGACCTAAGATCAAAAATCAACAAATAAATGGGGGCTGGGAAGAT  200

seq1  GGCTCAGTGGGTAAGAGCACTGACTGCTCTTTGGAAGGTCATGAATTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGTGGGTAAGAGCACTGACTGCTCTTTGGAAGGTCATGAATTCAA  250

seq1  ATCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATCTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATCTGATG  300

seq1  TCCTCTTCTGGTGTGTCTGAAGTCAGCTACAGTGTACATATATATAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCTGGTGTGTCTGAAGTCAGCTACAGTGTACATATATATAATAA  350

seq1  TAATTCTTGGGGGCAGAGGGAGCAGAATTGACCGGAGCAAGCTGAGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTTGGGGGCAGAGGGAGCAGAATTGACCGGAGCAAGCTGAGTTGA  400

seq1  CCAGAGCGAGCAGAGGTCCTAAAAATTCAATTCCCAGAAACCACATGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCGAGCAGAGGTCCTAAAAATTCAATTCCCAGAAACCACATGAAG  450

seq1  GCTCACAACCATCTGCACAGCTACAGTGTACTCACATACCTTAAATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACAACCATCTGCACAGCTACAGTGTACTCACATACCTTAAATAAAT  500

seq1  AAATAAATAAATAAATAAATAAATAGACAAATGGGACCTAATAAAATTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATAAATAAATAAATAGACAAATGGGACCTAATAAAATTGC  550

seq1  AAAGCTTCTGTAAGGCAAAGGACACTGTCAATAGGACAAAACAGCAACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCTGTAAGGCAAAGGACACTGTCAATAGGACAAAACAGCAACCA  600

seq1  ACAGTTTGGGAAAAGATCTTTACCAATCCTACATCTAGTAGAGGGCCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTGGGAAAAGATCTTTACCAATCCTACATCTAGTAGAGGGCCAAT  650

seq1  ATCCAAAATATACAGAAAACTTAAGAATTAGACTCCAGAGAACCAAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAATATACAGAAAACTTAAGAATTAGACTCCAGAGAACCAAATAA  700

seq1  CCCTATTAAAAATGGAGCTCTGGGGTGTCTGGTTGGTTGATATTGTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATTAAAAATGGAGCTCTGGGGTGTCTGGTTGGTTGATATTGTTGTT  750

seq1  CTTCCTATGGGGTTGCAAACCCCTTCAAACTCCTTCCGTCCTTTCTCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTATGGGGTTGCAAACCCCTTCAAACTCCTTCCGTCCTTTCTCTTA  800

seq1  ACTCCTCCATTGGGGACCCCGTGCTCAGTCCAGTGGTTGGCTGTGGGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCCATTGGGGACCCCGTGCTCAGTCCAGTGGTTGGCTGTGGGCAT  850

seq1  CCGCCTCTGTATTTGTCTGGCTCTGACAGAGCTTCTCAGGAGACAGCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTCTGTATTTGTCTGGCTCTGACAGAGCTTCTCAGGAGACAGCTAT  900

seq1  ATCAGGCTCCTGTCAGTAAGTACTTTTTGGCATCCACAATAGTGTCTAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCTCCTGTCAGTAAGTACTTTTTGGCATCCACAATAGTGTCTAGG  950

seq1  TTTGGTGACTGTATATGGCATGG-CTCCCCAGGTGGG  986
      ||||||||||||||||||||||| |||||||||||||
seq2  TTTGGTGACTGTATATGGCATGGCCTCCCCAGGTGGG  987


seq1: chr7_148946911_148947112
seq2: B6Ng01-329O11.g_211_328 (reverse)

seq1  CTCTCTCCCTCTCTCTCCTTCCCTTTCTTTCTTTCTTTCTTTCTTTCTTT  50
      |||||||||||||||||  || || ||| ||| ||| |||||||||||||
seq2  CTCTCTCCCTCTCTCTC--TCTCTCTCTCTCTCTCTCTCTTTCTTTCTTT  48

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCT  100
      ||||||||||||||||||||||||||||||||||                
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT----------------  82

seq1  CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCTTCCTTCCTTCC  150
                                                        
seq2  --------------------------------------------------  82

seq1  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTCCTTTCTTGTTA  200
                      || ||| || |||||| |||||||||||||||||
seq2  ----------------TTTCTTTCTCCCTTTCATTCTTCCTTTCTTGTTA  116

seq1  TT  202
      ||
seq2  TT  118


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