BAC Information

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BAC

Clone NameB6Ng01-330I21
Chromosome7 (Build37)
Map Location 21,453,386 - 21,454,519
singlet/doubletsinglet
Overlap geneLOC100043561
Upstream geneCeacam19, Pvr, 2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523, EG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311
Downstream geneLOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330I21.bB6Ng01-330I21.g
ACCGA117185GA117186
length1,133408
definitionB6Ng01-330I21.b B6Ng01-330I21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttacacaactttattattgagtgcaatatcatattgttccca
tacatactatttttaatatgttactataatacacaaaattcaattaatta
tttttatgttgcatttatatattcttttatttgttattgatttagttaca
tcccaattgaagcgtttcctccctcctaattgtattgaattctgatgatg
gaatcacagactcatagtagactctttactgtctgtattcatatgcaaag
accttggtgtggcaaaatgtgtgttattgtgctcttgacctactgaacca
gtaaagatgtagttgcaatacaaaatttacattgaggcaggagtaataaa
atcagtataaaattttatttgagttattatacattcattgtttttcaggc
aatttgcctgtagtgtgatagaatagtgtcttacttatcaagtgaagaaa
ttgtgtcaaatcaattggtaagtgtggacaataaaacagagacccgagga
gagtagtgtccgacctaatcatcactccagggtcctgtaaagccctctcc
atgtctgctcatggtaaatccgtgaaaaccactgaggaagtggctctcca
gatcctcttgctttgccagtttggggttggaactgtggccaatgtctttc
tgtttgtccataatttctctccagtcttgactggttctaaacagaggccc
agacaggtgattttaagccacatggctgtggccaatgccttgactctatt
cctcactatatttccaaacaacatgagtgcttttgctcccaaaactcctc
caaatgaactcaaatgtaaattagatttcttcagtcacatggtggcaaga
agcaaaaatttgtgttccacctgtgtcctgagtattcatcagtttgtcac
tcttgttcctgttaatagaggtaaaggtaaacttatactcagagcaagtg
tcccaaatttgtggaattattccctgctacagttgttggttttacagtgt
cttaagtaacatccacatttccaattaagtcacctggtccacagatacag
acaataacactgactcttaaaagcaaccttgttctgtccacttctggaat
cattgtaagcatggtccttctgcagttccatga
atctcatatagaaacccagacactattgtggatgccaagtagagcatgct
gaaaggagcctgacatggctgtctcctgcgagaccctgccagagccctac
aaatacatagacagatgctcacagccaatcattggactgagccaaaggtc
cctaatagaatagatagagaaaaggctgaaggagttcaaggggattgcaa
ccccactggaagaacaacagtatcaaccaagcagtccacaagaactccca
ggaatatagtcatcaaccaaggagtacacatggctccagctgcatacgtt
gtagaggatatccttgttaggattcagtgggaggagtggttcttggacct
atgaaggatcaatagaggcccagtgtaggggaactgagggaagaggggtg
ggagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_21453386_21454519
seq2: B6Ng01-330I21.b_48_1180

seq1  GAATTCAGTTACACAACTTTATTATTGAGTGCAATATCATATTGTTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTACACAACTTTATTATTGAGTGCAATATCATATTGTTCCCA  50

seq1  TACATACTATTTTTAATATGTTACTATAATACACAAAATTCAATTAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACTATTTTTAATATGTTACTATAATACACAAAATTCAATTAATTA  100

seq1  TTTTTATGTTGCATTTATATATTCTTTTATTTGTTATTGATTTAGTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGTTGCATTTATATATTCTTTTATTTGTTATTGATTTAGTTACA  150

seq1  TCCCAATTGAAGCGTTTCCTCCCTCCTAATTGTATTGAATTCTGATGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATTGAAGCGTTTCCTCCCTCCTAATTGTATTGAATTCTGATGATG  200

seq1  GAATCACAGACTCATAGTAGACTCTTTACTGTCTGTATTCATATGCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACAGACTCATAGTAGACTCTTTACTGTCTGTATTCATATGCAAAG  250

seq1  ACCTTGGTGTGGCAAAATGTGTGTTATTGTGCTCTTGACCTACTGAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGTGTGGCAAAATGTGTGTTATTGTGCTCTTGACCTACTGAACCA  300

seq1  GTAAAGATGTAGTTGCAATACAAAATTTACATTGAGGCAGGAGTAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGATGTAGTTGCAATACAAAATTTACATTGAGGCAGGAGTAATAAA  350

seq1  ATCAGTATAAAATTTTATTTGAGTTATTATACATTCATTGTTTTTCAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTATAAAATTTTATTTGAGTTATTATACATTCATTGTTTTTCAGGC  400

seq1  AATTTGCCTGTAGTGTGATAGAATAGTGTCTTACTTATCAAGTGAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCCTGTAGTGTGATAGAATAGTGTCTTACTTATCAAGTGAAGAAA  450

seq1  TTGTGTCAAATCAATTGGTAAGTGTGGACAATAAAACAGAGACCCGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCAAATCAATTGGTAAGTGTGGACAATAAAACAGAGACCCGAGGA  500

seq1  GAGTAGTGTCCGACCTAATCATCACTCCAGGGTCCTGTAAAGCCCTCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTGTCCGACCTAATCATCACTCCAGGGTCCTGTAAAGCCCTCTCC  550

seq1  ATGTCTGCTCATGGTAAATCCGTGAAAACCACTGAGGAAGTGGCTCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCTCATGGTAAATCCGTGAAAACCACTGAGGAAGTGGCTCTCCA  600

seq1  GATCCTCTTGCTTTGCCAGTTTGGGGTTGGAACTGTGGCCAATGTCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCTTGCTTTGCCAGTTTGGGGTTGGAACTGTGGCCAATGTCTTTC  650

seq1  TGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAACAGAGGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTCCATAATTTCTCTCCAGTCTTGACTGGTTCTAAACAGAGGCCC  700

seq1  AGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGTGATTTTAAGCCACATGGCTGTGGCCAATGCCTTGACTCTATT  750

seq1  CCTCACTATATTTCCAAACAACATGAGTGCTTTTGCTCCCAAAACTCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTATATTTCCAAACAACATGAGTGCTTTTGCTCCCAAAACTCCTC  800

seq1  CAAATGAACTCAAATGTAAATTAGATTTCTTCAGTCACATGGTGGCAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAACTCAAATGTAAATTAGATTTCTTCAGTCACATGGTGGCAAGA  850

seq1  AGCAAAAATTTGTGTTCCACCTGTGTCCTGAGTATTCATCAGTTTGTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAATTTGTGTTCCACCTGTGTCCTGAGTATTCATCAGTTTGTCAC  900

seq1  TCTTGTTCCTGTTAATAGAGGTAAAGGTAAACTTATACTCAGAGCAAGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTCCTGTTAATAGAGGTAAAGGTAAACTTATACTCAGAGCAAGTG  950

seq1  TCCCAAATTTGTGGAATTATT-CCTGCTACAGTTGTTGGTTTTACAGTGT  999
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCCAAATTTGTGGAATTATTCCCTGCTACAGTTGTTGGTTTTACAGTGT  1000

seq1  CTTAAGTAACATCCACA-TTCCAATTAAGGTCA-CTGGTCCACAGATAAC  1047
      ||||||||||||||||| |||||||||| |||| ||||||||||||| ||
seq2  CTTAAGTAACATCCACATTTCCAATTAA-GTCACCTGGTCCACAGAT-AC  1048

seq1  AGACAATAACACTGACTC-TAAAAGCAA-CTTGTTCTGTTCCACTTCTGG  1095
      |||||||||||||||||| ||||||||| ||||||||| |||||||||||
seq2  AGACAATAACACTGACTCTTAAAAGCAACCTTGTTCTG-TCCACTTCTGG  1097

seq1  ATTCATTGTAGGCATGGTCTTCTTGCAGTTTTCCCATGA  1134
      | |||||||| |||||||| |  |||||||   ||||||
seq2  AATCATTGTAAGCATGGTCCTTCTGCAGTT---CCATGA  1133