BAC Information

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BAC

Clone NameB6Ng01-330L18
Chromosome7 (Build37)
Map Location 87,217,001 - 87,369,861
singlet/doubletdoublet
Overlap geneZfp710, Idh2, Sema4b
Upstream geneAcan, Hapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik
Downstream geneCib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592, Alpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330L18.bB6Ng01-330L18.g
ACCGA117306GA117307
length3941,132
definitionB6Ng01-330L18.b B6Ng01-330L18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,217,001 - 87,217,400)(87,368,740 - 87,369,861)
sequence
tcaaggcaggcagagaagttcccttggggggctcctttcctccttgcagt
cctggggccttgacctttggctcaagggaaaggtggctgggaccgaacca
gagagccaaatggactagagtttctttttccctttcttttcttgttttta
tttttaagcaagagataaatagaggtcactctgagatgacaagagaacat
ggggagagataaaagagagcaaatgggagcaggccagaagcaatggacat
gggggagagctggactctaccctgcgatggtgggagagatgaaagaggag
aaagagatgagatgggaacgcaagaccgagtggcagagcggagcggagga
tggggttgccatggaaacagaagaggggaggaatggagggagga
gaattcattccagtaggacttgtccgcaccccagctggccctgccaccag
ccggtgcactcactcgtgatgtgttgataatgactggggtaccatcacgc
tggttcttttggtccattaccccctcctccatcacctctgggcagtagct
ggccacaagctgctggaatccttcttctatcgaccaacactggaacaccc
ccaaaccctgctggctgcccaccagcagcaggtccccggtgggtaacacg
cggcaggaggcagaggcattgactggggctccattgtgcacccagagccg
agtggccaggtttgagaggagtgggcaggccagggtgttcactgtgtttg
gttggatctggacttgtttacatggcttacctgtgggcagaataggcatg
gggtagaagaggtcattgcccagagcagctccagacttaggcccaccctc
ctcaatctggtgctatgatagtgtggtagtttgaatgaaaatggccccat
aggctcaaaggcaattaattacactattgggacgtgtggccttgctgaaa
gaagtgtgtcactggggctgggccttgaggtttcagatgcccaagccagg
ttcagtgacactctctctccctgctgtccactgatccagatttagaactc
tcactacctctccagcaccatgtctgcctgcaatgccaccatgcttcctg
ctatgacaataatggactgacctctgaactgtaagctaacctcaattaaa
cattttcctttataagagctgtgatcatggtgtctcttcccagccacaga
aactcttaactaggaccaatggtaacttgggcgatggttgggactaagtg
actcatgatcctggactcttctttgtagggctaagagtgaataaatttgt
accctaaaaatacctagaaggtgttttccaagcaatatggctcacctttc
ccagggcatcttacctggcacaagaaaccgtgtccttgtatgaggattct
tgcagagtctttgaccacttggcacccctcaatgttctggggtccatggt
cttggatataaaagaagtctctgggtaggatccatgggcgatgttctttt
tacctctacatgctggtgtaaggcccaccaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_87217001_87217400
seq2: B6Ng01-330L18.b_49_448

seq1  GAATTCTCAAGGCAGGCAGAGAAGTTCCCTTGGGGGGCTCCTTTCCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAGGCAGGCAGAGAAGTTCCCTTGGGGGGCTCCTTTCCTCCT  50

seq1  TGCAGTCCTGGGGCCTTGACCTTTGGCTCAAGGGAAAGGTGGCTGGGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCCTGGGGCCTTGACCTTTGGCTCAAGGGAAAGGTGGCTGGGACC  100

seq1  GAACCAGAGAGCCAAATGGACTAGAGTTTCTTTTTCCCTTTCTTTTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGAGAGCCAAATGGACTAGAGTTTCTTTTTCCCTTTCTTTTCTTG  150

seq1  TTTTTATTTTTAAGCAAGAGATAAATAGAGGTCACTCTGAGATGACAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTTTAAGCAAGAGATAAATAGAGGTCACTCTGAGATGACAAGA  200

seq1  GAACATGGGGAGAGATAAAAGAGAGCAAATGGGAGCAGGCCAGAAGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGGGAGAGATAAAAGAGAGCAAATGGGAGCAGGCCAGAAGCAAT  250

seq1  GGACATGGGGGAGAGCTGGACTCTACCCTGCGATGGTGGGAGAGATGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGGGGGAGAGCTGGACTCTACCCTGCGATGGTGGGAGAGATGAAA  300

seq1  GAGGAGAAAGAGATGAGATGGGAACGCAAGACCGAGTGGCAGAGCGGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAAAGAGATGAGATGGGAACGCAAGACCGAGTGGCAGAGCGGAGC  350

seq1  GGAGGATGGGGTTGCCATGGAAACAGAAGAGGGGAGGAATGGAGGGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATGGGGTTGCCATGGAAACAGAAGAGGGGAGGAATGGAGGGAGGA  400

seq1: chr7_87368740_87369861
seq2: B6Ng01-330L18.g_68_1199 (reverse)

seq1  CCTGGTGGG-CTTACACCAGCA-GTGGAGGGAAAAAGGAACACTGGCCAA  48
      | ||||||| |||||||||||| || |||| ||||| ||||| | ||| |
seq2  CTTGGTGGGCCTTACACCAGCATGTAGAGGTAAAAA-GAACA-TCGCCCA  48

seq1  TGGGATTCTACCCA-AGAC-TCTTTTATA-CCCAGGCCATGGA-CCCAGG  94
      | |||| ||||||| |||| ||||||||| || || ||||||| ||||| 
seq2  T-GGATCCTACCCAGAGACTTCTTTTATATCCAAGACCATGGACCCCAGA  97

seq1  ACATTGA-GGGTGCC-AGT-GTCAAGGAACTCTGCAAGAATTCCTCATAC  141
      ||||||| ||||||| ||| ||||| | |||||||||||| |||||||||
seq2  ACATTGAGGGGTGCCAAGTGGTCAAAG-ACTCTGCAAGAA-TCCTCATAC  145

seq1  AAGG-CCCGGTTTCTTGTGCCAGGTAAGATGCCCTGGGAAAGGTGAGCCA  190
      |||| | |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACACGGTTTCTTGTGCCAGGTAAGATGCCCTGGGAAAGGTGAGCCA  195

seq1  TATTTGCTTGGAAAACACC-TCTAGGTATTTTTA-GGTACAAATTTATTC  238
      || |||||||||||||||| |||||||||||||| |||||||||||||||
seq2  TA-TTGCTTGGAAAACACCTTCTAGGTATTTTTAGGGTACAAATTTATTC  244

seq1  -CTC-TAGCCCTACAAAGAAGAGTCCA-GATCATGAGTCACTTAGTCCCA  285
       ||| |||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACTCTTAGCCCTACAAAGAAGAGTCCAGGATCATGAGTCACTTAGTCCCA  294

seq1  ACCATCGCCCAAGTTACCATTGGTCCTAGTT-AGAGTTTCTGTGGCTGGG  334
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACCATCGCCCAAGTTACCATTGGTCCTAGTTAAGAGTTTCTGTGGCTGGG  344

seq1  AAGAGACACCATGATCACAGCTCTTATAAAGGAAAATGTTTAATTGAGGT  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACACCATGATCACAGCTCTTATAAAGGAAAATGTTTAATTGAGGT  394

seq1  TAGCTTACAGTTCAGAGGTCAGTCCATTATTGTCATAGCAGGAAGCATGG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTACAGTTCAGAGGTCAGTCCATTATTGTCATAGCAGGAAGCATGG  444

seq1  TGGCATTGCAGGCAGACATGGTGCTGGAGAGGTAGTGAGAGTTCTAAATC  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGCAGGCAGACATGGTGCTGGAGAGGTAGTGAGAGTTCTAAATC  494

seq1  TGGATCAGTGGACAGCAGGGAGAGAGAGTGTCACTGAACCTGGCTTGGGC  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCAGTGGACAGCAGGGAGAGAGAGTGTCACTGAACCTGGCTTGGGC  544

seq1  ATCTGAAACCTCAAGGCCCAGCCCCAGTGACACACTTCTTTCAGCAAGGC  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAACCTCAAGGCCCAGCCCCAGTGACACACTTCTTTCAGCAAGGC  594

seq1  CACACGTCCCAATAGTGTAATTAATTGCCTTTGAGCCTATGGGGCCATTT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGTCCCAATAGTGTAATTAATTGCCTTTGAGCCTATGGGGCCATTT  644

seq1  TCATTCAAACTACCACACTATCATAGCACCAGATTGAGGAGGGTGGGCCT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAAACTACCACACTATCATAGCACCAGATTGAGGAGGGTGGGCCT  694

seq1  AAGTCTGGAGCTGCTCTGGGCAATGACCTCTTCTACCCCATGCCTATTCT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGGAGCTGCTCTGGGCAATGACCTCTTCTACCCCATGCCTATTCT  744

seq1  GCCCACAGGTAAGCCATGTAAACAAGTCCAGATCCAACCAAACACAGTGA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACAGGTAAGCCATGTAAACAAGTCCAGATCCAACCAAACACAGTGA  794

seq1  ACACCCTGGCCTGCCCACTCCTCTCAAACCTGGCCACTCGGCTCTGGGTG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTGGCCTGCCCACTCCTCTCAAACCTGGCCACTCGGCTCTGGGTG  844

seq1  CACAATGGAGCCCCAGTCAATGCCTCTGCCTCCTGCCGCGTGTTACCCAC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGGAGCCCCAGTCAATGCCTCTGCCTCCTGCCGCGTGTTACCCAC  894

seq1  CGGGGACCTGCTGCTGGTGGGCAGCCAGCAGGGTTTGGGGGTGTTCCAGT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGACCTGCTGCTGGTGGGCAGCCAGCAGGGTTTGGGGGTGTTCCAGT  944

seq1  GTTGGTCGATAGAAGAAGGATTCCAGCAGCTTGTGGCCAGCTACTGCCCA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTCGATAGAAGAAGGATTCCAGCAGCTTGTGGCCAGCTACTGCCCA  994

seq1  GAGGTGATGGAGGAGGGGGTAATGGACCAAAAGAACCAGCGTGATGGTAC  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGATGGAGGAGGGGGTAATGGACCAAAAGAACCAGCGTGATGGTAC  1044

seq1  CCCAGTCATTATCAACACATCACGAGTGAGTGCACCGGCTGGTGGCAGGG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCATTATCAACACATCACGAGTGAGTGCACCGGCTGGTGGCAGGG  1094

seq1  CCAGCTGGGGTGCGGACAAGTCCTACTGGAATGAATTC  1122
      ||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGGGTGCGGACAAGTCCTACTGGAATGAATTC  1132