BAC Information

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BAC

Clone NameB6Ng01-331A17
Chromosome7 (Build37)
Map Location 25,679,214 - 25,679,706
singlet/doubletsinglet
Overlap genenone
Upstream geneV1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19
Downstream geneCd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331A17.bB6Ng01-331A17.g
ACCGA117521GA117522
length423969
definitionB6Ng01-331A17.b B6Ng01-331A17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgttcagttctgatggccatatccagggatccaccccataatcagctt
ccaaacgctgacaccattgcatacactagcaagattttatcgaaaggacc
cagatgtagctgtctcttttgagactatgccagagcctagcaaacacaga
agtggatgctcacagtcaactattggatggatcacagggctcccaatgga
ggagctagagaaagtacccaaggagctaaagggatctacaaccctatagg
tggaacaacattatgaactaaccagtaccccggagctcttgactctagct
gcaaatgtatcaaaagatggcctagtcggccatcactggaaagagaagcc
cattggatacgcaaactgtatatgccccagtacaggggaacgccagggcc
aaaaaaaaatgggaatgagtggg
gaattcaaagtgtttgtaagggaagacctccattagagatttagcatact
agaaaaaataagacgttttattttagggagtccaaagtctttattggtat
ctttagtgtttctttctttttgtgtattgattgattttttttgatgaaaa
aactcaccatcatactcacctgagtatctgatatagttgttaacgaagga
aacagaggtgattgtccacatatttttgcttgcttgtatgccttgcagtt
taggaaattcttatggtttggtgatacttatgctacttctaactgcactg
ttgtaggggattcctctcttttttaaattaggtatttatttcatttacat
ttccaatgttatcccaaaagtcccccacatgctccccacccactccccca
ccctcccattcccactcccacttcttggccctggcgttcccctgtactga
ggcatataaagtttgcatgatcaatgggcctctctttccagtgatggccg
actaggccatcttctgatatatatgcagctagagacacaagctccggagg
gaactggttagttcatattgtagttccacctatagggttgcagatccctt
tagctccttggttactttctctagctcctccattgggggccctgtgatcc
attcaatagctgactgtgagcatccacttctgtgtttgctaggccccagc
atagtctcacaagagacagctatatctgggtcctttcagcaaaatcttgc
tagagtatgcaatggtgtcagcgtttggaagctgattataggatggatcc
ccggatatggcagtttctagatggttcatcctttcctttcgtcacagctc
caaactttgtctctgtaactccttccaagggtgttttgttcccaattcta
agaaggggcaaattgtccacactttagtctttgttcttcttgagtttcgt
tgtgtttgcaaattgtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25679214_25679706
seq2: B6Ng01-331A17.g_418_933 (reverse)

seq1  TACAGAGACAAAGTTTGGAGCTGAGAC-----AAAAGGATGGACCATCTA  45
      ||||||||||||||||||||||| |||      |||||||| ||||||||
seq2  TACAGAGACAAAGTTTGGAGCTGTGACGAAAGGAAAGGATGAACCATCTA  50

seq1  GAGACTGCCATACCTGGGGATCCATCCCATAATCAGCCTCCAAACGTTGA  95
      || ||||||||| | |||||||||||| ||||||||| |||||||| |||
seq2  GAAACTGCCATATCCGGGGATCCATCCTATAATCAGCTTCCAAACGCTGA  100

seq1  CACCATTGCATACACCTTTTCAGCAAGATTTTGCTGAAAGGACCCTGATA  145
      |||||||||||||     |  |||||||||||||||||||||||| ||||
seq2  CACCATTGCATAC-----TCTAGCAAGATTTTGCTGAAAGGACCCAGATA  145

seq1  TAGCTGTCTCTTGTGAGACTATTCTTGGGCCTAGCAAACACAGAAGTGGA  195
      |||||||||||||||||||||| || ||||||||||||||||||||||||
seq2  TAGCTGTCTCTTGTGAGACTATGCTGGGGCCTAGCAAACACAGAAGTGGA  195

seq1  TGCCCATAGTCATTTATAGGATGGATCACAGGGCCCCTAACGGAGGAGCT  245
      ||| || |||||  ||| | ||||||||||||||||| || |||||||||
seq2  TGCTCACAGTCAGCTATTGAATGGATCACAGGGCCCCCAATGGAGGAGCT  245

seq1  AGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC  295
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGTAACCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAAC  295

seq1  AACAATATGAACTAACCAGTACCCCCCAGAGCTCATGACTCTAGCTGCAT  345
       ||||||||||||||||||| ||| || |||||  || ||||||||||||
seq2  TACAATATGAACTAACCAGTTCCCTCCGGAGCTTGTGTCTCTAGCTGCAT  345

seq1  ATGTATCAGAAGATGGCCTAGTCAGCCATCAGTGGAAAGAGAGGCCCATT  395
      || |||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  ATATATCAGAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  395

seq1  GGTCTTGCAAATTTTATATGCCTAAGTACAGGGGAATGCCAGGGCCAAGA  445
      | || |||||| ||||||||||| |||||||||||| |||||||||||||
seq2  GATCATGCAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAGA  445

seq1  AGTGAGAGTGGG---GGGAAGG------------------GCA--TGGGG  472
      |||| |||||||   |||| ||                  |||  |||||
seq2  AGTGGGAGTGGGAATGGGAGGGTGGGGGAGTGGGTGGGGAGCATGTGGGG  495

seq1  GACTTTTGGGATAGCATTGGA  493
      ||||||||||||| |||||||
seq2  GACTTTTGGGATAACATTGGA  516