BAC Information

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BAC

Clone NameB6Ng01-331B17
Chromosome7 (Build37)
Map Location 59,471,443 - 59,472,627
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331B17.bB6Ng01-331B17.g
ACCGA117567GA117568
length1,1981,068
definitionB6Ng01-331B17.b B6Ng01-331B17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtggttagctcccagtttctgagttctctgagagctaaatga
tctctgtttctatgtctggctttatttttctaagccctataattcagttc
ctatggacctacatggttttaaattattaattattttaattaatttcaat
acaccaatatttgcaagaacatgtcactgcttcttctgtaggaaccacat
tctgactaaatttggggaaacaatatatcaatgtagtctgtacaaaactt
cctctggcgttttccatcttaagtgtgttttatgttcagtggaggatttt
gaaaagtctcacagtaagggctgaagatgacagatgcgctaaccacacag
attggatcattgaatgaatgtatccaagcagagcgttgtaccccctaaga
ccacacaattattgtgtgtcaaaaaaaaattaagaaagctaagtgtggtt
gcacacgcctgtcattctgggactgacagctaagctaagctattcatgag
ctccaccccagcctgagcttcatggtaaacctctcataaaaatcaatgaa
ataatacatattaagactttaagaaggattactgtgaaaggcgtaaacaa
gattggctcctgaggttactcataactggatggagttcacatcatgattc
ttacatgatgaagtcctcaggatccagtgtcctcatttctgaacttcatt
gcagaaattcacctcttaaactaagcaagtggtgtccttatctcaagcac
attccctccatgtctgtgctcatttaacagatacttcaatggtgggtgcc
tcttctttactcacttaagaaaccatgatggaagagcttcagaaatgtgc
ttagagacacgagagaccaggtgttgacttaattctaatcaaagctatgc
aattacgtaagcttaaattctaatgatgttacatcatttaaacaaaagtt
atgggttttgactattgttcacaagtcgacaagtatttgttcgcgaaacc
ctaaatcaacaataattctacagagattactgaccaccttcatatctgta
ctggctagttttgtgtcaacttgacaacagctggagttatcacaagaaga
aaggacccttcagtgaggaatgcctccaattgaagattccactgtatgcc
atttttctcaattaggtgattcaaggggggaaagcgcccccctttgtg

gaattcctgatttgattcaaataattttaagaggtcaagatagttgatag
gaagtttaaggttagaattaaaattagaaggtgcctgcgcctccaaagta
ggaaagcctgcatagttagaaaaggaattcaatgcgctttcatgtactac
aagcaagcacattgcactacgaagaaaaataggttcagaataaatgaatg
atcaaaaaaatactcactctaagtcaggtctgaggatgagaccacaagtg
tgcaccacgacaaaggaaggccataaacatagagttgataattctactac
ataaaaaaagaaaaaaaactattgatttgaatatataatgaacatataga
tttgaagataaattaaactactgttttgaatgtataattaaaaattctgc
agtaattctgtcttgtgtaacattttacttatgattggatgaggtaattc
ttcttcctacattgaggaaagctcattgaactcttgtacaggacattaaa
ggactaaagaagcattgttggaacctgctttgattcatctggtgtgtgta
tgtgtgcggggtatgcgtatgtgcgcttaactcaccaccagttaccctca
cctgcctctgccaggtgccacaggtgtgggctacatgtaaaaatactgcc
tgacaccccagtatgcgctctttctctctctctctctctctctctctctc
tctctctctctcacacacacacacacacacacacacactctctttctttt
cattatatgtataagagagagagacgtctctccctccccgatatacaaat
atcatagtagagagagagatattcttttttctctacaacaaaaaaaaaat
acacaaaaaaaagcgcccccccccacgtgtttatattgttttttcgcgtc
tctccctcctcagatgtagtctcatctattaaaagagtggttttatcttt
gtcttgcctctctttcccacataaaagagattatgacgagtgcgcctcta
cccctgctggggtgtgtgcgcgacataacatatataaatatatcactagc
cgtctctctgtcaaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59471443_59472627
seq2: B6Ng01-331B17.b_46_1243

seq1  GAATTCCAGTGGTTAGCTCCCAGTTTCTGAGTTCTCTGAGAGCTAAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGGTTAGCTCCCAGTTTCTGAGTTCTCTGAGAGCTAAATGA  50

seq1  TCTCTGTTTCTATGTCTGGCTTTATTTTTCTAAGCCCTATAATTCAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTTCTATGTCTGGCTTTATTTTTCTAAGCCCTATAATTCAGTTC  100

seq1  CTATGGACCTACATGGTTTTAAATTATTAATTATTTTAATTAATTTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGACCTACATGGTTTTAAATTATTAATTATTTTAATTAATTTCAAT  150

seq1  ACACCAATATTTGCAAGAACATGTCACTGCTTCTTCTGTAGGAACCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAATATTTGCAAGAACATGTCACTGCTTCTTCTGTAGGAACCACAT  200

seq1  TCTGACTAAATTTGGGGAAACAATATATCAATGTAGTCTGTACAAAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTAAATTTGGGGAAACAATATATCAATGTAGTCTGTACAAAACTT  250

seq1  CCTCTGGCGTTTTCCATCTTAAGTGTGTTTTATGTTCAGTGGAGGATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGCGTTTTCCATCTTAAGTGTGTTTTATGTTCAGTGGAGGATTTT  300

seq1  GAAAAGTCTCACAGTAAGGGCTGAAGATGACAGATGCGCTAACCACACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTCTCACAGTAAGGGCTGAAGATGACAGATGCGCTAACCACACAG  350

seq1  ATTGGATCATTGAATGAATGTATCCAAGCAGAGCGTTGTACCCCCTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATCATTGAATGAATGTATCCAAGCAGAGCGTTGTACCCCCTAAGA  400

seq1  CCACACAATTATTGTGTGTCAAAAAAAAATTAAGAAAGCTAAGTGTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAATTATTGTGTGTCAAAAAAAAATTAAGAAAGCTAAGTGTGGTT  450

seq1  GCACACGCCTGTCATTCTGGGACTGACAGCTAAGCTAAGCTATTCATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACGCCTGTCATTCTGGGACTGACAGCTAAGCTAAGCTATTCATGAG  500

seq1  CTCCACCCCAGCCTGAGCTTCATGGTAAACCTCTCATAAAAATCAATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCCCAGCCTGAGCTTCATGGTAAACCTCTCATAAAAATCAATGAA  550

seq1  ATAATACATATTAAGACTTTAAGAAGGATTACTGTGAAAGGCGTAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACATATTAAGACTTTAAGAAGGATTACTGTGAAAGGCGTAAACAA  600

seq1  GATTGGCTCCTGAGGTTACTCATAACTGGATGGAGTTCACATCATGATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGCTCCTGAGGTTACTCATAACTGGATGGAGTTCACATCATGATTC  650

seq1  TTACATGATGAAGTCCTCAGGATCCAGTGTCCTCATTTCTGAACTTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGATGAAGTCCTCAGGATCCAGTGTCCTCATTTCTGAACTTCATT  700

seq1  GCAGAAATTCACCTCTTAAACTAAGCAAGTGGTGTCCTTATCTCAAGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAATTCACCTCTTAAACTAAGCAAGTGGTGTCCTTATCTCAAGCAC  750

seq1  ATTCCCTCCATGTCTGTGCTCATTTAACAGATACTTCAATGGTGGGTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCCATGTCTGTGCTCATTTAACAGATACTTCAATGGTGGGTGCC  800

seq1  TCTTCTTTACTCACTTAAGAAACCATGATGGAAGAGCTTCAGAAATGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTACTCACTTAAGAAACCATGATGGAAGAGCTTCAGAAATGTGC  850

seq1  TTAGAGACACGAGAGACCAGGTGTTGACTTAATTCTAATCAAAGCTATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGACACGAGAGACCAGGTGTTGACTTAATTCTAATCAAAGCTATGC  900

seq1  AATTACGTAAGCTTAAATTCTAATGATGTTACATCATTTAAACAAAAGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACGTAAGCTTAAATTCTAATGATGTTACATCATTTAAACAAAAGTT  950

seq1  ATGGGTTTTGACTATTGTTCACAAGTCGACAAGTATTTGTTCGCGAAACC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTTTGACTATTGTTCACAAGTCGACAAGTATTTGTTCGCGAAACC  1000

seq1  CT-AATCAAC-ATAATTCTACAAGAAGATTACTGACCACCTTCATATCTG  1048
      || ||||||| |||||||||||   |||||||||||||||||||||||||
seq2  CTAAATCAACAATAATTCTACA--GAGATTACTGACCACCTTCATATCTG  1048

seq1  TACTGGCTAGTTTTGTGTCAACTTGAC-ACAGCTGGAGTTATCACA--GA  1095
      ||||||||||||||||||||||||||| ||||||||||||||||||   |
seq2  TACTGGCTAGTTTTGTGTCAACTTGACAACAGCTGGAGTTATCACAAGAA  1098

seq1  GAAAGGA-CCTTCAGTTGAGGAAATGCCTCCA--TG-AGATCCAACTGTA  1141
      ||||||| ||||||| ||||| ||||||||||  || |||| | ||||||
seq2  GAAAGGACCCTTCAG-TGAGG-AATGCCTCCAATTGAAGATTCCACTGTA  1146

seq1  AGGCA-TTTTCTCAATTA-GTGA-TCAA-GGGGGAAAG-GCCCC---TTG  1183
       | || |||||||||||| |||| |||| ||||||||| |||||   |||
seq2  TGCCATTTTTCTCAATTAGGTGATTCAAGGGGGGAAAGCGCCCCCCTTTG  1196

seq1  TG  1185
      ||
seq2  TG  1198


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