BAC Information

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BAC

Clone NameB6Ng01-331H02
Chromosome7 (Build37)
Map Location 7,638,635 - 7,795,596
singlet/doubletdoublet
Overlap geneLOC100042636, LOC665485, EG625353
Upstream geneZim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368
Downstream geneVmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331H02.bB6Ng01-331H02.g
ACCGA117806GA117807
length825998
definitionB6Ng01-331H02.b B6Ng01-331H02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,794,772 - 7,795,596)(7,638,635 - 7,639,610)
sequence
gaattctgtcaaatgtaaagttggtgcatacccaccaaataatgggttat
agtgcatgtgtctagtttttgaatcactctcactggttgctctagtgata
tcaggaagtatcatatctactgaacttccatacagtgtccataaaatctt
gcactcattcactttcttcattttctctcagagaactaaactctctaatt
attacaattttattcttcgatttgctttcatggagattgccctctggtaa
cttccaaaaaatgttgataaggcaattgaatccaccactttgcgtagaaa
aatgagatctaggacagacatggttacacatagaaacaatctaccaaatc
aaataatcaatgagaaacagacagagagtaactaaataatcagcaaagat
gaaatctgaacatattttctgatttcccgtaagagcacacactgaagaaa
atactgacttttttcttttgttcttcaagctactggccaatattctaagg
aggaaatgttccttttctgctgtcaaatacaaatatattatatccaacaa
tgatcagaagcccagggactctgtggatgaattgggaatatgtggaagaa
gctgaagaggagggtgaccagcattctcaacaaacatggcaaagcaagat
ctctcagacattgagcctctaaccagagatcatacactagctgatgtgaa
gcccccaacaaatatgcagcataagacttcctggtctagcatcagtggga
gagaaacacctaaccccagagagacttaattccccagggattgggaagga
ctggatgttggggatgtagtgatat
gaattcctggacaatgttaactcacacgtggagataagaagctgttcacg
tgcttccagaaacctaaagatacctcccaatggggtcctgtaagcagata
ggaacacatagtctcttcattacagaaataattagggatagggctttctt
tttttttacgaaataaatatggtgtaggtattacagtttttccatcacaa
tggcccaaagagtatcttataatcaaagacatatttggtaaaagatcagg
atttctgttgatttcatccattgcaaacaccaatgccaaagcatatttgt
ggtttttagttgtttttctgtaaaagagtacagtgtgtattatggacaga
tgattatacatgcacatttgtactcaatagaagcactatgctatactgga
agtttctgaatctgacatctaaagacgggaacaaatggcttttgttacaa
gattggattgacagatgaaccttgaaaatagaaagcactttaaaagttta
tgacagtgttggtcacataaataagagatggtattgatctcatccacaga
gataatttccatttttgtttttgagcgcttgatcagaaggtaaagagaaa
accacagatactgacaaaacagtaattctgatcatgtcttcatttttgaa
attattgagcaataaataaatttgttattagagccactgatttcatgata
ttttctcgtgaaattaacttgaattggttaaggaaatgaaaccatagcca
ggagtgttatcacccgcctttaatcccagcacttgggatgcagaatcagt
ggatttctttagttttgaggtcagccttgtcctacaaagtgagttttccc
agacagccagagctatatagagaaacccctgtcttcaaaaaaagaaaaga
aaagaataggaaggacagatgtaatggattgattgaatgaatgtaacgaa
agaaagaaagaaggattgcaaggaaggaagggatggatggagggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7794772_7795596
seq2: B6Ng01-331H02.b_45_869 (reverse)

seq1  ATATCACTACATCCCCAACATCCAGTCCTTCCCAATCCCTGGGGAATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACTACATCCCCAACATCCAGTCCTTCCCAATCCCTGGGGAATTAA  50

seq1  GTCTCTCTGGGGTTAGGTGTTTCTCTCCCACTGATGCTAGACCAGGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTGGGGTTAGGTGTTTCTCTCCCACTGATGCTAGACCAGGAAGT  100

seq1  CTTATGCTGCATATTTGTTGGGGGCTTCACATCAGCTAGTGTATGATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGCTGCATATTTGTTGGGGGCTTCACATCAGCTAGTGTATGATCTC  150

seq1  TGGTTAGAGGCTCAATGTCTGAGAGATCTTGCTTTTCCATGTTTGTTGAG  200
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGTTAGAGGCTCAATGTCTGAGAGATCTTGCTTTGCCATGTTTGTTGAG  200

seq1  AATGCTGGTCACCCTCCTCTTCAGCTTCTTCCACATATTCCCAATTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGGTCACCCTCCTCTTCAGCTTCTTCCACATATTCCCAATTCATC  250

seq1  CACAGAGTCCCTGGGCTTCTGATCATTGTTGGATATAATATATTTGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGTCCCTGGGCTTCTGATCATTGTTGGATATAATATATTTGTATT  300

seq1  TGACAGCAGAAAAGGAACATTTCCTCCTTAGAATATTGGCCAGTAGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCAGAAAAGGAACATTTCCTCCTTAGAATATTGGCCAGTAGCTTG  350

seq1  AAGAACAAAAGAAAAAAGTCAGTATTTTCTTCAGTGTGTGCTCTTACGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAAAAGAAAAAAGTCAGTATTTTCTTCAGTGTGTGCTCTTACGGG  400

seq1  AAATCAGAAAATATGTTCAGATTTCATCTTTGCTGATTATTTAGTTACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGAAAATATGTTCAGATTTCATCTTTGCTGATTATTTAGTTACTC  450

seq1  TCTGTCTGTTTCTCATTGATTATTTGATTTGGTAGATTGTTTCTATGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTTTCTCATTGATTATTTGATTTGGTAGATTGTTTCTATGTGT  500

seq1  AACCATGTCTGTCCTAGATCTCATTTTTCTACGCAAAGTGGTGGATTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGTCTGTCCTAGATCTCATTTTTCTACGCAAAGTGGTGGATTCAA  550

seq1  TTGCCTTATCAACATTTTTTGGAAGTTACCAGAGGGCAATCTCCATGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTATCAACATTTTTTGGAAGTTACCAGAGGGCAATCTCCATGAAA  600

seq1  GCAAATCGAAGAATAAAATTGTAATAATTAGAGAGTTTAGTTCTCTGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCGAAGAATAAAATTGTAATAATTAGAGAGTTTAGTTCTCTGAGA  650

seq1  GAAAATGAAGAAAGTGAATGAGTGCAAGATTTTATGGACACTGTATGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAAGAAAGTGAATGAGTGCAAGATTTTATGGACACTGTATGGAA  700

seq1  GTTCAGTAGATATGATACTTCCTGATATCACTAGAGCAACCAGTGAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTAGATATGATACTTCCTGATATCACTAGAGCAACCAGTGAGAGT  750

seq1  GATTCAAAAACTAGACACATGCACTATAACCCATTATTTGGTGGGTATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAAACTAGACACATGCACTATAACCCATTATTTGGTGGGTATGC  800

seq1  ACCAACTTTACATTTGACAGAATTC  825
      |||||||||||||||||||||||||
seq2  ACCAACTTTACATTTGACAGAATTC  825

seq1: chr7_7638635_7639610
seq2: B6Ng01-331H02.g_66_1063

seq1  GAATTCCTGGACAATGTTAACTCACACGTGGAGATAAGAAGCTGTTCATG  50
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAATTCCTGGACAATGTTAACTCACACGTGGAGATAAGAAGCTGTTCACG  50

seq1  TGCTTCCAGAAACCTAAAGATACCTCCCAATGGGGTCCTGTAAGCAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCAGAAACCTAAAGATACCTCCCAATGGGGTCCTGTAAGCAGATA  100

seq1  GGAACACATAGTCTCTTCATTACAGAAATAATTAGGGATAGGGCTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACATAGTCTCTTCATTACAGAAATAATTAGGGATAGGGCTTTCTT  150

seq1  TTTTTTTACGAAATAAATATGGTGTAGGTATTACAGTTTTTCCATCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTACGAAATAAATATGGTGTAGGTATTACAGTTTTTCCATCACAA  200

seq1  CGGCCCAAAGTGTATCTTATAATCAAAGACATATTTGGTAAAAGATCAGG  250
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAAAGAGTATCTTATAATCAAAGACATATTTGGTAAAAGATCAGG  250

seq1  ATTTCTGTTGATTTCATCCATTGCAAACACCAATGCCAAAGCATATTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTTGATTTCATCCATTGCAAACACCAATGCCAAAGCATATTTGT  300

seq1  GGTTTTTAGTTGTTTTTCTGTAAAAGAGTACAGTGTGTATTATGGACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTAGTTGTTTTTCTGTAAAAGAGTACAGTGTGTATTATGGACAGA  350

seq1  TGATTATACATGCACATTTGTACTCAATAGAAGCACTATGCTATACTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATACATGCACATTTGTACTCAATAGAAGCACTATGCTATACTGGA  400

seq1  AGTTTCTGAATCTGACATCTAAAGACGGGAACAAATGGCTTTTGTTACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTGAATCTGACATCTAAAGACGGGAACAAATGGCTTTTGTTACAA  450

seq1  GATTGGATTGACAGATGAACCTTGAAAATAGAAAGCACTTTAAAAGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGATTGACAGATGAACCTTGAAAATAGAAAGCACTTTAAAAGTTTA  500

seq1  TGACAGTGTTGGTCACATAAATAAGAGATGGTATTGATCTCATCCACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTGTTGGTCACATAAATAAGAGATGGTATTGATCTCATCCACAGA  550

seq1  GATAATTTCCATTTTTGTTTTTGAGCGCTTGATCAGAAGGTAAAGAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTTCCATTTTTGTTTTTGAGCGCTTGATCAGAAGGTAAAGAGAAA  600

seq1  ACCACAGATACTGACAAAACAGTAATTCTGATCATGTCTT-AATTTTGAA  649
      |||||||||||||||||||||||||||||||||||||||| | |||||||
seq2  ACCACAGATACTGACAAAACAGTAATTCTGATCATGTCTTCATTTTTGAA  650

seq1  ATTATTGAGCAATAAATAAATTTGTTATTAGAGCCACTGAGTTCATGATA  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATTATTGAGCAATAAATAAATTTGTTATTAGAGCCACTGATTTCATGATA  700

seq1  TTTTCTCATGAAATTAAC-TGAATTGGTTAAGGAAATGAAACCATAGCCA  748
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  TTTTCTCGTGAAATTAACTTGAATTGGTTAAGGAAATGAAACCATAGCCA  750

seq1  GGAGTGTTGTCACCCGCCTTTAATCCCAGCACTTGGGATGCAGAAGCAGG  798
      |||||||| |||||||||||||||||||||||||||||||||||| || |
seq2  GGAGTGTTATCACCCGCCTTTAATCCCAGCACTTGGGATGCAGAATCA-G  799

seq1  TGGATTTC-TTAG-TTTGAGGCCAGCCTGGT-CTACAAAGTGAG--TTCC  843
      |||||||| |||| ||||||| |||||| || ||||||||||||  ||||
seq2  TGGATTTCTTTAGTTTTGAGGTCAGCCTTGTCCTACAAAGTGAGTTTTCC  849

seq1  CAGACAGCCAGAGCTATATAGAGAAA-CCCTGTCTCATAAAAAAAAAAAA  892
      |||||||||||||||||||||||||| ||||||||  | ||||||| |||
seq2  CAGACAGCCAGAGCTATATAGAGAAACCCCTGTCT--TCAAAAAAAGAAA  897

seq1  AGAAAAGAAAAGAAAAGA-------AAAGAAAGGAAGGAAGGAA-GGAAG  934
      ||||||||| || || ||       || | |  ||  ||| ||| | || 
seq2  AGAAAAGAATAGGAAGGACAGATGTAATGGATTGATTGAATGAATGTAAC  947

seq1  GAAGGAAGGAAGGAAGG-----AAGGAAGGAAGGGAGGGAGGGAGGG---  976
      ||| ||| ||| |||||     |||||||||||||| ||| ||||||   
seq2  GAAAGAAAGAAAGAAGGATTGCAAGGAAGGAAGGGATGGATGGAGGGAGG  997

seq1  -  976
       
seq2  G  998