BAC Information

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BAC

Clone NameB6Ng01-331I06
Chromosome7 (Build37)
Map Location 141,029,306 - 141,202,789
singlet/doubletdoublet
Overlap geneFank1, Adam12
Upstream gene2010208K18Rik, C430003P19Rik, Zranb1, Ctbp2, LOC668747, 4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695
Downstream geneA130023I24Rik, 4933400E14Rik, LOC100043248, LOC100043699, LOC668750, Dock1, B830028B13Rik, EG668693
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331I06.bB6Ng01-331I06.g
ACCGA117859GA117860
length1,1401,152
definitionB6Ng01-331I06.b B6Ng01-331I06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,029,306 - 141,030,306)(141,201,642 - 141,202,789)
sequence
gaattcactctgtagaccaggctggccttgaactccgagatctacctact
tatgcctccatgagtgctgggattacaggcagtgccaccaccccttggct
gaggatatgaattcttaaaccagccaagctgttccctattggatggtggc
tggatcctgtgacgagacagtgtttaactctgcaagaaacaccaggtttt
cctctagcagccattatgttcctttcagtagtgacagttgccactggtga
gtgtgtttcttgacatttggtggccaggcctttggattttcccctttacc
atctacactgcattgcggtatcacatccatgagaatttgcagtctctgga
ggatgtgatgtggtgccctttacatatattaattccccatccttgtctct
ctctttgctgaggtgtctatttagatcttaacttcttaattaggccgctg
tgctgttgctgaattttaatgaattctttgtatatttggggtatgtcttc
cagcaaatatgttttgcacttcttaatcggcaatgtgtccatttcattct
tactttggacaggaatttttgcagagtttatagttgtaggctgacagttt
tttttccctttagtttgaatgtattcctgcacgctgctcaggttcccatt
ggcatccctgggaacctggatgtcacctgacagtcttctgtcagtgctac
ccgcttcctctctgaaggcgtggcgagcctaccattgccttcatcctctc
taaaggtgtggggagcctaccattgccttcgtcctctctgaaggcgtggg
gagcctaccattgccttcgtcctctctgaaggcgtggggagcctaccatt
gccttcgtcctctctgaaggcgtggggagcctaccattgccttcatcctc
ttctgaagcgtggcgagcctaccattgcctttcgatgctcttcgggcttc
atttcggcacgtctaggtgcattttaccttcctagggttaggtactatgt
tctgtgaggagcagaggaagccttgactgaattgtgttgttgatagtggg
catggccgtgacacattcaagtacttcatagtcttaaaccatgggcaaat
tggaaaagccgttccttacctagctttgaaggcatgacaa
gaattccagattagcccaggctatagtgagaccctctctaaaattaacag
aaagctatgtggggacggggatagccagagctttggctactaagtttggg
ccatgggaccccaaaaggcttcccaggacccagagctgggaggagaagca
agagaacgaatgaatgtgactgaggatgaatataaagaccaggtgctagc
acggagaagaaaactgcgctagaatctcacaaaggttggcttctcaggga
agcctcctgtgaagaactctcccagcctacagaaggcaagaaagaattgt
ctgccaggtgccatgaactgaaagaatctcaatatctatctctctctctc
tccctctctgtctctctccctctctgtctctctctccctctccctctctc
tctctctctctctctctctcacacacacacacacacacagacacagagag
agagagagagagagagagagaaaaccccatgaagcctttcacatgtgtta
tatgcattggggatgcgttggcccatatccagagtctgatgtcatcctcc
tcatcatcatcatcaggctggtattcccagtcagatattgacctcaaagc
tactcccaaaccagagacgtctacttgagcccaggctgaatccagggtta
gagtgttccctagagaattttctacagcctcaatgtatgagatgaccata
caaaaagtaaaaaaaaaagggggggggataaaattttaaagatgaaccct
aaggcaaaaatcacaagccagacaatgaacaaatgcactgagaaggagct
cccatgggcagaaggagagggggaacaagtcctccccagaacagagacag
tgagaagagtcagagggaaaaaattggaagaacaagatagacctaatgga
aattccacaaacgtacaattattccgtgtagaaaagaagcagtaatcaaa
ataagaatgtgacagtggtgtccccagattgaacgaagcctattgatcgt
caccaaaatcacagttctggggaagagagaaaaaaaacaaacaaatcaaa
acagaaacacctctagggtgatttacagagaatctgcaggattccaagag
aaagtctaaaactgccctgaaacaaggcaatggtagcaaatgagaacaac
cg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_141029306_141030306
seq2: B6Ng01-331I06.b_185_1187

seq1  ATTGGATGGTGGCTGGATCCTGTGACGAGACAGTGTTTAACTCTGCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATGGTGGCTGGATCCTGTGACGAGACAGTGTTTAACTCTGCAAGA  50

seq1  AACACCAGGTTTTCCTCTAGCAGCCATTATGTTCCTTTCAGTAGTGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCAGGTTTTCCTCTAGCAGCCATTATGTTCCTTTCAGTAGTGACAG  100

seq1  TTGCCACTGGTGAGTGTGTTTCTTGACATTTGGTGGCCAGGCCTTTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACTGGTGAGTGTGTTTCTTGACATTTGGTGGCCAGGCCTTTGGAT  150

seq1  TTTCCCCTTTACCATCTACACTGCATTGCGGTATCACATCCATGAGAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTTTACCATCTACACTGCATTGCGGTATCACATCCATGAGAATT  200

seq1  TGCAGTCTCTGGAGGATGTGATGTGGTGCCCTTTACATATATTAATTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCTCTGGAGGATGTGATGTGGTGCCCTTTACATATATTAATTCCC  250

seq1  CATCCTTGTCTCTCTCTTTGCTGAGGTGTCTATTTAGATCTTAACTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTGTCTCTCTCTTTGCTGAGGTGTCTATTTAGATCTTAACTTCTT  300

seq1  AATTAGGCCGCTGTGCTGTTGCTGAATTTTAATGAATTCTTTGTATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGCCGCTGTGCTGTTGCTGAATTTTAATGAATTCTTTGTATATTT  350

seq1  GGGGTATGTCTTCCAGCAAATATGTTTTGCACTTCTTAATCGGCAATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTATGTCTTCCAGCAAATATGTTTTGCACTTCTTAATCGGCAATGTG  400

seq1  TCCATTTCATTCTTACTTTGGACAGGAATTTTTGCAGAGTTTATAGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTCATTCTTACTTTGGACAGGAATTTTTGCAGAGTTTATAGTTGT  450

seq1  AGGCTGACAGTTTTTTTTCCCTTTAGTTTGAATGTATTCCTGCACGCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGACAGTTTTTTTTCCCTTTAGTTTGAATGTATTCCTGCACGCTGC  500

seq1  TCAGGTTCCCATTGGCATCCCTGGGAACCTGGATGTCACCTGACAGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTCCCATTGGCATCCCTGGGAACCTGGATGTCACCTGACAGTCTT  550

seq1  CTGTCAGTGCTACCCGCTTCCTCTCTGAAGGCGTGGCGAGCCTACCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGTGCTACCCGCTTCCTCTCTGAAGGCGTGGCGAGCCTACCATTG  600

seq1  CCTTCATCCTCTCTAAAGGTGTGGGGAGCCTACCATTGCCTTCGTCCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATCCTCTCTAAAGGTGTGGGGAGCCTACCATTGCCTTCGTCCTCT  650

seq1  CTGAAGGCGTGGGGAGCCTACCATTGCCTTCGTCCTCTCTGAAGGCGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGCGTGGGGAGCCTACCATTGCCTTCGTCCTCTCTGAAGGCGTGG  700

seq1  GGAGCCTACCATTGCCTTCGTCCTCTCTGAAGGCGTGGGGAGCCTACCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTACCATTGCCTTCGTCCTCTCTGAAGGCGTGGGGAGCCTACCAT  750

seq1  TGCCTTCATCCTC-TCTGAAGGCGTGGCGAGCCTACCATTGCC-TTCGAT  798
      ||||||||||||| |||||| |||||||||||||||||||||| ||||||
seq2  TGCCTTCATCCTCTTCTGAA-GCGTGGCGAGCCTACCATTGCCTTTCGAT  799

seq1  GCTCTTCGGGC-TCATTTCGGCACGTCTAGGTGCATTTTA-CTTCCTAGG  846
      ||||||||||| |||||||||||||||||||||||||||| |||||||||
seq2  GCTCTTCGGGCTTCATTTCGGCACGTCTAGGTGCATTTTACCTTCCTAGG  849

seq1  GTTAGGTACTAATGTTCTGTGAGGAGCAGAGGAAGCCCTGACTGAA-TGT  895
      |||||||||| |||||||||||||||||||||||||| |||||||| |||
seq2  GTTAGGTACT-ATGTTCTGTGAGGAGCAGAGGAAGCCTTGACTGAATTGT  898

seq1  GTTG-TGATAGTGGGCATGGCCGTGACCACA-TCAAGGACTTCATAGTCT  943
      |||| ||||||||||||||||||||| |||| ||||| ||||||||||||
seq2  GTTGTTGATAGTGGGCATGGCCGTGA-CACATTCAAGTACTTCATAGTCT  947

seq1  AAAACCCATGGG-AAAATGGTAAAGCCTGTCCCTACCCCAAGCCTCAGAG  992
       ||| ||||||| ||| ||| ||||||  ||| ||  || ||| |   ||
seq2  TAAA-CCATGGGCAAATTGGAAAAGCCGTTCCTTA--CCTAGCTTTGAAG  994

seq1  GCATGACAA  1001
      |||||||||
seq2  GCATGACAA  1003

seq1: chr7_141201642_141202789
seq2: B6Ng01-331I06.g_66_1217 (reverse)

seq1  CGGTTGTCCTCATTTGCTACAAATTGCTTTGTCTCA-GGCAGTTTTAAGA  49
      ||||||| ||||||||||||  ||||| |||| ||| ||||||||| |||
seq2  CGGTTGTTCTCATTTGCTAC-CATTGCCTTGTTTCAGGGCAGTTTT-AGA  48

seq1  CATTCTCTTTGAAATCCTGCAGGTTCTCTGTAAATCACCCTAGA-GTGTT  98
      | ||||| ||| |||||||||| ||||||||||||||||||||| |||||
seq2  CTTTCTC-TTGGAATCCTGCAGATTCTCTGTAAATCACCCTAGAGGTGTT  97

seq1  TCTGTTTTGTTTTGTTTTGTTTTTTTTCTCTCT--CCCAGGACTGGTGGA  146
      ||||||||| |||| ||||||||||||||||||  ||||| ||||   ||
seq2  TCTGTTTTGATTTG-TTTGTTTTTTTTCTCTCTTCCCCAGAACTG--TGA  144

seq1  TTTTTGTGAAGGTTCATA-GCTTCGTTCAATCTGGGGACACCACTGTCAC  195
      |||| |||| | |  ||| |||||||||||||||||||||||||||||||
seq2  TTTTGGTGACGATCAATAGGCTTCGTTCAATCTGGGGACACCACTGTCAC  194

seq1  ATTCT--ATTTGATTACTGCTTCTTTTCTACACGGAAT-ATTGTACGTTT  242
      |||||   |||||||||||||||||||||||||||||| |||||||||||
seq2  ATTCTTATTTTGATTACTGCTTCTTTTCTACACGGAATAATTGTACGTTT  244

seq1  GTGGAATTTCCATTAGGTCTATCTTGTTCTTCCAATTTTTTCCCTCTGAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATTTCCATTAGGTCTATCTTGTTCTTCCAATTTTTTCCCTCTGAC  294

seq1  TCTTCTC-CTGTCTCTGTTCTGGGGAGGACTTGTTCCCCCTCTCCTTCTG  341
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCACTGTCTCTGTTCTGGGGAGGACTTGTTCCCCCTCTCCTTCTG  344

seq1  CCCATGGGAGCTCCTTCTCAGTGCATTTGTTCATTGTCTGGCTTGTGATT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGGAGCTCCTTCTCAGTGCATTTGTTCATTGTCTGGCTTGTGATT  394

seq1  TTTGCCTTAGGGTTCATCTTTAAAATTTTATCCCCCCCCC-TTTTTTTTT  440
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTGCCTTAGGGTTCATCTTTAAAATTTTATCCCCCCCCCTTTTTTTTTT  444

seq1  ACTTTTTGTATGGTCATCTCATACATTGAGGCTGTAGAAAATTCTCTAGG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTGTATGGTCATCTCATACATTGAGGCTGTAGAAAATTCTCTAGG  494

seq1  GAACACTCTAACCCTGGATTCAGCCTGGGCTCAAGTAGACGTCTCTGGTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTCTAACCCTGGATTCAGCCTGGGCTCAAGTAGACGTCTCTGGTT  544

seq1  TGGGAGTAGCTTTGAGGTCAATATCTGACTGGGAATACCAGCCTGATGAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTAGCTTTGAGGTCAATATCTGACTGGGAATACCAGCCTGATGAT  594

seq1  GATGATGAGGAGGATGACATCAGACTCTGGATATGGGCCAACGCATCCCC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGAGGAGGATGACATCAGACTCTGGATATGGGCCAACGCATCCCC  644

seq1  AATGCATATAACACATGTGAAAGGCTTCATGGGGTTTTCTCTCTCTCTCT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATATAACACATGTGAAAGGCTTCATGGGGTTTTCTCTCTCTCTCT  694

seq1  CTCTCTCTCTCTCTGTGTCTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTGTGTCTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGA  744

seq1  GAGAGAGAGAGAGAGGGAGAGGGAGAGAGAGACAGAGAGGGAGAGAGACA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGGGAGAGGGAGAGAGAGACAGAGAGGGAGAGAGACA  794

seq1  GAGAGGGAGAGAGAGAGAGATAGATATTGAGATTCTTTCAGTTCATGGCA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAGAGAGAGAGAGATAGATATTGAGATTCTTTCAGTTCATGGCA  844

seq1  CCTGGCAGACAATTCTTTCTTGCCTTCTGTAGGCTGGGAGAGTTCTTCAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAGACAATTCTTTCTTGCCTTCTGTAGGCTGGGAGAGTTCTTCAC  894

seq1  AGGAGGCTTCCCTGAGAAGCCAACCTTTGTGAGATTCTAGCGCAGTTTTC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCTTCCCTGAGAAGCCAACCTTTGTGAGATTCTAGCGCAGTTTTC  944

seq1  TTCTCCGTGCTAGCACCTGGTCTTTATATTCATCCTCAGTCACATTCATT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCGTGCTAGCACCTGGTCTTTATATTCATCCTCAGTCACATTCATT  994

seq1  CGTTCTCTTGCTTCTCCTCCCAGCTCTGGGTCCTGGGAAGCCTTTTGGGG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTCTTGCTTCTCCTCCCAGCTCTGGGTCCTGGGAAGCCTTTTGGGG  1044

seq1  TCCCATGGCCCAAACTTAGTAGCCAAAGCTCTGGCTATCCCCGTCCCCAC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGGCCCAAACTTAGTAGCCAAAGCTCTGGCTATCCCCGTCCCCAC  1094

seq1  ATAGCTTTCTGTTAATTTTAGAGAGGGTCTCACTATAGCCTGGGCTAATC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTTCTGTTAATTTTAGAGAGGGTCTCACTATAGCCTGGGCTAATC  1144

seq1  TGGAATTC  1148
      ||||||||
seq2  TGGAATTC  1152