BAC Information

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BAC

Clone NameB6Ng01-331K07
Chromosome7 (Build37)
Map Location 105,264,982 - 105,266,067
singlet/doubletsinglet
Overlap geneMyo7a
Upstream geneGab2, LOC100040457, Usp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594, Pak1, Gdpd4
Downstream geneCapn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331K07.bB6Ng01-331K07.g
ACCGA117955GA117956
length1,095902
definitionB6Ng01-331K07.b B6Ng01-331K07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccacctctgccaccacggcttctttggttgctgacacgtgtctc
tgggcaggagtgatgattcatcccccagtcccagacattccagacagagg
aagcacatgcaacggccccagtgtagaaggtctttggggaagcagttagc
aagtttgcttaggggggacctgggcagaagtgagtcagggtgacagggcc
caagctggagctccccagggaagaggcacaggtgctgcccatcagctgag
ccttccaggccccctactccccagagccattctggtctctgaccctcagc
ccttccccgtgatcagcctgagactcatgaacttcttggtctccaatgtg
ggagccaggaatgtaggcagtgcgccagatgggccgggcacagagccttt
gggctgagaagccgggtgctactggggctcagccacgagtttcctgttgt
ctcaggctatgagaggccaacggagcagcctggctggaaaccccaaggct
gcacagggcccatgtgttaaaggcaggctatagctctagatcaggaaaaa
attcagggactgaaagcttgcttgatggcccatcagagaaagccaaagcc
aggctaaaaggggctgatgggtggtgattcacacagacaccccccagaag
gaggatccagggtccccacaggcctcaggggtgttccccagagcctctac
ctgactggacttcttttcccctggactgtttgcttctgactatctgtgaa
tggtggcaagcttcgtcttgcagggactgtttttggtagtggatctttaa
gtgaatggtggctctacccattttcaagtgggacataccttttctattac
atctctcatcctccacggtgccccggccataggtgctgaccggctcagca
ggctctggatttggatgatgctggggggggaccttgagctgcccatccag
gtcccttctgacctgtgctgtaatcccttgaactgccagactctgttgcc
tttttctgcctgccgctcacttcctggcggtctcacccctctgctccctt
ccctgaaccttggcttccccctcctgctgcctacaatcctcccag
gaattccaggaagtctttactttctttctttattgcttccctgatcaagt
tatcattgattagagagttcttcagttatcatcggtatgtaggctttctg
ttgtttttgttgttattgaagaccagccttaggccatggtgatctgatca
aatgcatagaaattatttcaatcttcttgtattggttcaggtttgttttg
tgaccaattatacggtcaattttggagaaggtaccatgaggtgctgagaa
gaaggtttatgcttttgttttagggtgaaatgttctgtagatatctgtta
aatccatttggttcataacctctattagtttcaccatgtctctgtttagt
ttctgttttaatgacctattggtgagagtggggtgttgaaggcttgcact
attactgtttggggttcaatgtatgttttgagctttagtagaatttattt
tataaatatgggtgcccttgcattttgggcatagatgttcagaattaaga
ctttctcttggtgaagttttcctttgacaaacataaaatgtccttcccat
cttgcttgataacttttggttaaaagtccattttattggatattagaatg
gctactcccacttgtttctgtgaccatttgtttggaagactttttcccag
ccttttttctctgaggtagtgtctgtctttgtcattaaggtatgtttctt
gtatgcagcaaaatgttggatttttcttgagtgttagcttatgtcttttt
ttattggagaattgaatccattgatatcgagacagatgattgtttggtcc
cttcttgtgttttgtttgttgtaagtgggcatttatgtggtatgtgattc
ttttttttgggttttgttaatgagaagaattaattttatggttttttctc
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_105264982_105266067
seq2: B6Ng01-331K07.b_50_1144 (reverse)

seq1  CTGGGAGGA-TGTAGGCAGCAGGAGGGGGAAGCAAAGG-TCAGGGGAGGG  48
      ||||||||| ||||||||||||||||||||||| |||| |||||| ||||
seq2  CTGGGAGGATTGTAGGCAGCAGGAGGGGGAAGCCAAGGTTCAGGGAAGGG  50

seq1  AGCAGA-GGGTGAGACCGGCAGG-AGTGAGCGGCAGGCAG-AAAAGGCAA  95
      |||||| ||||||||||| |||| |||||||||||||||| |||||||||
seq2  AGCAGAGGGGTGAGACCGCCAGGAAGTGAGCGGCAGGCAGAAAAAGGCAA  100

seq1  CAGAGTCTGGCAGTTC-AGGGATTACAGCACAGGTCAGAAGGGACCTGGA  144
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGAGTCTGGCAGTTCAAGGGATTACAGCACAGGTCAGAAGGGACCTGGA  150

seq1  TGGGCAGCTCAAGGT-CCCCCCCAGCATCATCCAAATCCAGAGCCTGCTG  193
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGGGCAGCTCAAGGTCCCCCCCCAGCATCATCCAAATCCAGAGCCTGCTG  200

seq1  AGCCGGTCAGCACCTATGGCCGGGGCACCGTGGAGGATGAGAGATGTAAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGTCAGCACCTATGGCCGGGGCACCGTGGAGGATGAGAGATGTAAT  250

seq1  AG-AAAGGTATGTCCCACTTGAAAATGGGTAGAGCCACCATTCACTTAAA  292
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGTATGTCCCACTTGAAAATGGGTAGAGCCACCATTCACTTAAA  300

seq1  GATCCACTACC-AAAACAGTCCCTGCAAGACGAAGCTTGCCACCATTCAC  341
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GATCCACTACCAAAAACAGTCCCTGCAAGACGAAGCTTGCCACCATTCAC  350

seq1  AGATAGTCAGAAGCAAACAGTCCAGGGGAAAAGAAGTCCAGTCAGGTAGA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTCAGAAGCAAACAGTCCAGGGGAAAAGAAGTCCAGTCAGGTAGA  400

seq1  GGCTCTGGGGAACACCCCTGAGGCCTGTGGGGACCCTGGATCCTCCTTCT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGGGGAACACCCCTGAGGCCTGTGGGGACCCTGGATCCTCCTTCT  450

seq1  GGGGGGTGTCTGTGTGAATCACCACCCATCAGCCCCTTTTAGCCTGGCTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGTGTCTGTGTGAATCACCACCCATCAGCCCCTTTTAGCCTGGCTT  500

seq1  TGGCTTTCTCTGATGGGCCATCAAGCAAGCTTTCAGTCCCTGAATTTTTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTCTCTGATGGGCCATCAAGCAAGCTTTCAGTCCCTGAATTTTTT  550

seq1  CCTGATCTAGAGCTATAGCCTGCCTTTAACACATGGGCCCTGTGCAGCCT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCTAGAGCTATAGCCTGCCTTTAACACATGGGCCCTGTGCAGCCT  600

seq1  TGGGGTTTCCAGCCAGGCTGCTCCGTTGGCCTCTCATAGCCTGAGACAAC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTTCCAGCCAGGCTGCTCCGTTGGCCTCTCATAGCCTGAGACAAC  650

seq1  AGGAAACTCGTGGCTGAGCCCCAGTAGCACCCGGCTTCTCAGCCCAAAGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACTCGTGGCTGAGCCCCAGTAGCACCCGGCTTCTCAGCCCAAAGG  700

seq1  CTCTGTGCCCGGCCCATCTGGCGCACTGCCTACATTCCTGGCTCCCACAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCCCGGCCCATCTGGCGCACTGCCTACATTCCTGGCTCCCACAT  750

seq1  TGGAGACCAAGAAGTTCATGAGTCTCAGGCTGATCACGGGGAAGGGCTGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACCAAGAAGTTCATGAGTCTCAGGCTGATCACGGGGAAGGGCTGA  800

seq1  GGGTCAGAGACCAGAATGGCTCTGGGGAGTAGGGGGCCTGGAAGGCTCAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGAGACCAGAATGGCTCTGGGGAGTAGGGGGCCTGGAAGGCTCAG  850

seq1  CTGATGGGCAGCACCTGTGCCTCTTCCCTGGGGAGCTCCAGCTTGGGCCC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGGCAGCACCTGTGCCTCTTCCCTGGGGAGCTCCAGCTTGGGCCC  900

seq1  TGTCACCCTGACTCACTTCTGCCCAGGTCCCCCCTAAGCAAACTTGCTAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCCTGACTCACTTCTGCCCAGGTCCCCCCTAAGCAAACTTGCTAA  950

seq1  CTGCTTCCCCAAAGACCTTCTACACTGGGGCCGTTGCATGTGCTTCCTCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCCCAAAGACCTTCTACACTGGGGCCGTTGCATGTGCTTCCTCT  1000

seq1  GTCTGGAATGTCTGGGACTGGGGGATGAATCATCACTCCTGCCCAGAGAC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGAATGTCTGGGACTGGGGGATGAATCATCACTCCTGCCCAGAGAC  1050

seq1  ACGTGTCAGCAACCAAAGAAGCCGTGGTGGCAGAGGTGGGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTCAGCAACCAAAGAAGCCGTGGTGGCAGAGGTGGGAATTC  1095