BAC Information

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BAC

Clone NameB6Ng01-332D09
Chromosome7 (Build37)
Map Location 5,630,886 - 5,631,942
singlet/doubletsinglet
Overlap genenone
Upstream gene1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28, Ube2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2
Downstream geneLOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332D09.g
ACCGA118378
length1,175
definitionB6Ng01-332D09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgctcctggaccacatgcgtctgactccttgctactgccacat
ggattcaaactttcttttgcctgttgtatgattcctgccttagaaactgg
ggctgactctgaagggaagggaaccatgggaaaccgagggaaccaagggg
actacctcatctagacttgataggaataacgtgtgaaagagttctgttgc
taagatcagtttctatcatgcacaaaaaataaattctaatcccagcaccc
tcttgacaaataacaactattgataactacaatttaagaggtcctgatgc
ctttttatggctttcatgggcactgcacacatgtggtacactgacacaca
gtatgtcacatataaacataaaatatgaataaataaatcttacttttgga
tctggcacttgaatttttacttttggtctttgaaatgcagaatgaataac
cttgattcataaattacctgtttgtcttttctcatttctcctgacacttt
tcatggctttattttctattactttctaatattcagtcatttcaatatta
aattaatggtgttaaaacatgtgaaaattagtatttgtttttgcattgta
ctatgagctcaaaagactgatattttacttagaatcattgttaggaactt
catagagtatttactaatgacatggtaattctgtatgaattatagaaggt
cacatactattaaataagcttagtagctgtcaccatcaacaaacaaagaa
gggtagattccaggccttatatattaataagtggcacacatactgagcaa
aattctctgctgaaaacatagaaattttctacttagaaacaatattcatt
aaaaaaaaggaggttgggcaactcagcacctaggtcatttcttcactaga
tccatgtcaatggcttgtgactcctagagtgaaactaacattactacctt
tgaaaatatctcttacatctgtaatgatttgaagtgcctggcacttcaat
tttgaaggatttgagagtgacactactagagtgaggcccttttgatagtg
tggctttttgagagtgtgttcaatgtggccatgacatgagatcctcctcc
taaccatgagtcttgtcttcttgccaagcttcagaagtaaagtaactttc
agacgtcgtaccagcatgcctagca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_5630886_5631942
seq2: B6Ng01-332D09.g_216_1241

seq1  GACTACCTCATCTAGACTTGATAGGAATAACGTGTGAAAGAGTTCTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACCTCATCTAGACTTGATAGGAATAACGTGTGAAAGAGTTCTGTTG  50

seq1  CTAAGATCAGTTTCTATCATGCACAAAAAATAAATTCTAATCCCAGCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATCAGTTTCTATCATGCACAAAAAATAAATTCTAATCCCAGCACC  100

seq1  CTCTTGACAAATAACAACTATTGATAACTACAATTTAAGAGGTCCTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGACAAATAACAACTATTGATAACTACAATTTAAGAGGTCCTGATG  150

seq1  CCTTTTTATGGCTTTCATGGGCACTGCACACATGTGGTACACTGACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTATGGCTTTCATGGGCACTGCACACATGTGGTACACTGACACAC  200

seq1  AGTATGTCACATATAAACATAAAATATGAATAAATAAATCTTACTTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTCACATATAAACATAAAATATGAATAAATAAATCTTACTTTTGG  250

seq1  ATCTGGCACTTGAATTTTTACTTTTGGTCTTTGAAATGCAGAATGAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCACTTGAATTTTTACTTTTGGTCTTTGAAATGCAGAATGAATAA  300

seq1  CCTTGATTCATAAATTACCTGTTTGTCTTTTCTCATTTCTCCTGACACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATTCATAAATTACCTGTTTGTCTTTTCTCATTTCTCCTGACACTT  350

seq1  TTCATGGCTTTATTTTCTATTACTTTCTAATATTCAGTCATTTCAATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGCTTTATTTTCTATTACTTTCTAATATTCAGTCATTTCAATATT  400

seq1  AAATTAATGGTGTTAAAACATGTGAAAATTAGTATTTGTTTTTGCATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATGGTGTTAAAACATGTGAAAATTAGTATTTGTTTTTGCATTGT  450

seq1  ACTATGAGCTCAAAAGACTGATATTTTACTTAGAATCATTGTTAGGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGAGCTCAAAAGACTGATATTTTACTTAGAATCATTGTTAGGAACT  500

seq1  TCATAGAGTATTTACTAATGACATGGTAATTCTGTATGAATTATAGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAGTATTTACTAATGACATGGTAATTCTGTATGAATTATAGAAGG  550

seq1  TCACATACTATTAAATAAGCTTAGTAGCTGTCACCATCAACAAACAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACTATTAAATAAGCTTAGTAGCTGTCACCATCAACAAACAAAGA  600

seq1  AGGGTAGATTCCAGGCCTTATATATTAATAAGTGGCACACATACTGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGATTCCAGGCCTTATATATTAATAAGTGGCACACATACTGAGCA  650

seq1  AAATTCTCTGCTGAAAACATAGAAATTTTCTACTTAGAAACAATATTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCTGCTGAAAACATAGAAATTTTCTACTTAGAAACAATATTCAT  700

seq1  TAAAAAAAAGGAGGTTGGGCAACTCAGCACCTAGGTCATTTCTTCACTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAGGAGGTTGGGCAACTCAGCACCTAGGTCATTTCTTCACTAG  750

seq1  ATCCATGTCAATGGCTTGTGACTCCTAGAGTGAAAACTAACATTACTACC  800
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATCCATGTCAATGGCTTGTGACTCCTAGAGTG-AAACTAACATTACTACC  799

seq1  TTTGAAAAATATCTCTTACCATCTGTAATGATTTTGAAGTGCCTGGCACT  850
      |||| ||||||||||||| |||||||||||| ||||||||||||||||||
seq2  TTTG-AAAATATCTCTTA-CATCTGTAATGA-TTTGAAGTGCCTGGCACT  846

seq1  TCAAATTTTTGAAGGATTTTGAAGGAAGTGACACTACTAGGAAGTGAGGC  900
      ||||  |||||||||||||    |  ||||||||||||||  ||||||||
seq2  TCAA--TTTTGAAGGATTT----GAGAGTGACACTACTAG--AGTGAGGC  888

seq1  CCTTTTGAATAGGTGTGGGCTTTTTGGAAGAAGTGTG-TCAATGTGGGCA  949
      ||||||| ||| |||| |||||||||  || |||||| ||||||||| ||
seq2  CCTTTTG-ATA-GTGT-GGCTTTTTG--AG-AGTGTGTTCAATGTGGCCA  932

seq1  TGGACAATGAGATCCTCCTCCTAACCACATGGAAGTC-TGTCTTC-TGCT  997
      | ||| |||||||||||||||||||  ||||  |||| ||||||| ||| 
seq2  T-GAC-ATGAGATCCTCCTCCTAAC--CATG--AGTCTTGTCTTCTTGC-  975

seq1  AGAAGCCTTCAGATGAAGAGGTAAAATTCTCAGCACCTCCGGTACCATGC  1047
        ||| ||||||| | | ||    || | |||| || ||  |||||| ||
seq2  -CAAG-CTTCAGAAGTAAAG---TAACTTTCAG-ACGTC--GTACCA-GC  1016

seq1  ATGCCTAGCA  1057
      ||||||||||
seq2  ATGCCTAGCA  1026