BAC Information

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BAC

Clone NameB6Ng01-332K03
Chromosome7 (Build37)
Map Location 95,256,634 - 95,389,649
singlet/doubletdoublet
Overlap geneGrm5
Upstream geneLOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562, Tmem135
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332K03.bB6Ng01-332K03.g
ACCGA118679GA118680
length1,143881
definitionB6Ng01-332K03.b B6Ng01-332K03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,256,634 - 95,257,792)(95,388,769 - 95,389,649)
sequence
gaattccagtgactagagttattgagtcaataaaacccattctttacatt
taattgcttcgttgcattattcaacacctgacaacttcttcctgaaaaaa
aatgtattcctacaaagaataatgtacttcttgacagcttcttgagtgtt
ttcaaagtttatgttcacttctgatatccttttatgagactattcatcat
ggtctgtctttgttcttaaacttaatttttgagtgaatcaagtcagcatt
tcacatctgagcaaaaagggtttttgtttactttgctttgttttgtctta
ttttctatatgtctgagtttattaatactttttgttttatttttcaattt
gtttattcttgaaaatttaatacattatacaatgaaatctgatcatatcc
tcccctcctttcctcttccaactttctccacattcccctttccatgactg
agtatggaatctacagtttttggaatatttgataagccattctaatgtat
atattcacaagcttaaaggccagaaagttactctgcaacaacatacttga
gacagctttttaaatttggtctcactcattctaaactgaagattattaat
acttttttgcctgtctttatctggaatttttcttatcaattttccttgga
agttggtcttggactgtccttgggcactcctggaaataatttggagcatt
tggagtcatgcacacctcctccttgtgtgtcttatgatgcagtgctgtgt
tacacacttgcttatcatcagttctttcttaccaatgcatattttgaagc
ctgtgtagatttctgtgcttttttctgcctagggaaactccaggggatga
aatgccatttcatttgtgtgttgaaaaagcttgaagagtggcttttttct
ttacttggccattatgtagtcaaatttgacctttgaaaaatatgtttatg
ttgtcctcaaagcctaaatctataagcccacactgtagccttcatggaag
acctttctggtgtttcaaatgcatactagactatttaatcagttttctca
gcatagatcaggagagtaagaacatgtggtttgggtgtaaacactggtct
agcacttctaagatcacacttgtgaactggataacagaaatga

gaattcctaatgctgttcttaagccagaaacaacagtgaataattagaga
ggtgaactttgcagaataggaagatttgttgaaagatatatagatgtttt
gcaggacaagaagaagcctaaagggaacacgaatgccatgtattagttgc
ttaggagcagacaattggagaagaaatcagtgttgctctgttactgtaat
tggccgacagcagttctgagtcagggccaacccaaggaaaataatatgct
ccaaatgcctaattcttcttaaaaaactatcatcaagccctatatatcag
ctatatctgctaatgcaagtgaactgttttgagaagactgaaggaagtct
tcattaagttacgattgctatcatttattttcaagtagacaaaatgaggc
cacatcatttaccccactgtaggcttctttgtcccgagactcttccactt
ccttcatcctcagctgagatgttagggtagcactttgtctatttcccccc
atagcactgatcccacagacatattttccttgctaaagattaactttata
aatagaaaaggaataggaaaaggaagtatgagttcaataaattgctgtca
gacatagtcttagattccatttgtacatgttttatctttattgtcaaact
aacttaatgatcacatcattattattgtctaacaactaggaaagaagcaa
ggctgtacagagatatctatcccttctgtgataaggatttatgaaatgta
cagatggctgaatgttgggaacggagcaatgggatatgaaaaaataaaca
agtatttgagtagaaaagagaaaggaaggaaggaaggaaggaaggaagga
aggaaggaaggaaggaaggaaggaaggaacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95256634_95257792
seq2: B6Ng01-332K03.b_46_1188

seq1  GAATTCCAGTGACTAGAGTTATTGAGTCAATAAAACCCATTCTTTACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGACTAGAGTTATTGAGTCAATAAAACCCATTCTTTACATT  50

seq1  TAATTGCTTCGTTGCATTATTCAACACCTGACAACTTCTTCCTGAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCTTCGTTGCATTATTCAACACCTGACAACTTCTTCCTGAAAAAA  100

seq1  AATGTATTCCTACAAAGAATAATGTACTTCTTGACAGCTTCTTGAGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTCCTACAAAGAATAATGTACTTCTTGACAGCTTCTTGAGTGTT  150

seq1  TTCAAAGTTTATGTTCACTTCTGATATCCTTTTATGAGACTATTCATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTTTATGTTCACTTCTGATATCCTTTTATGAGACTATTCATCAT  200

seq1  GGTCTGTCTTTGTTCTTAAACTTAATTTTTGAGTGAATCAAGTCAGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTCTTTGTTCTTAAACTTAATTTTTGAGTGAATCAAGTCAGCATT  250

seq1  TCACATCTGAGCAAAAAGGGTTTTTGTTTACTTTGCTTTGTTTTGTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTGAGCAAAAAGGGTTTTTGTTTACTTTGCTTTGTTTTGTCTTA  300

seq1  TTTTCTATATGTCTGAGTTTATTAATACTTTTTGTTTTATTTTTCAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATATGTCTGAGTTTATTAATACTTTTTGTTTTATTTTTCAATTT  350

seq1  GTTTATTCTTGAAAATTTAATACATTATACAATGAAATCTGATCATATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCTTGAAAATTTAATACATTATACAATGAAATCTGATCATATCC  400

seq1  TCCCCTCCTTTCCTCTTCCAACTTTCTCCACATTCCCCTTTCCATGACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCTTTCCTCTTCCAACTTTCTCCACATTCCCCTTTCCATGACTG  450

seq1  AGTATGGAATCTACAGTTTTTGGAATATTTGATAAGCCATTCTAATGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGAATCTACAGTTTTTGGAATATTTGATAAGCCATTCTAATGTAT  500

seq1  ATATTCACAAGCTTAAAGGCCAGAAAGTTACTCTGCAACAACATACTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACAAGCTTAAAGGCCAGAAAGTTACTCTGCAACAACATACTTGA  550

seq1  GACAGCTTTTTAAATTTGGTCTCACTCATTCTAAACTGAAGATTATTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTTTTTAAATTTGGTCTCACTCATTCTAAACTGAAGATTATTAAT  600

seq1  ACTTTTTTGCCTGTCTTTATCTGGAATTTTTCTTATCAATTTTCCTTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTGCCTGTCTTTATCTGGAATTTTTCTTATCAATTTTCCTTGGA  650

seq1  AGTTGGTCTTGGACTGTCCTTGGGCACTCCTGGAAATAATTTGGAGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTCTTGGACTGTCCTTGGGCACTCCTGGAAATAATTTGGAGCATT  700

seq1  TGGAGTCATGCACACCTCCTCCTTGTGTGTCTTATGATGCAGTGCTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCATGCACACCTCCTCCTTGTGTGTCTTATGATGCAGTGCTGTGT  750

seq1  TACACACTTGCTTATCATCAGTTCTTTCTTACCAATGCATATTTTGAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACTTGCTTATCATCAGTTCTTTCTTACCAATGCATATTTTGAAGC  800

seq1  CTGTGTAGATTTCTGTGCTTTTTTCTGCCTAGGGAAACTCCAGGGGATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGATTTCTGTGCTTTTTTCTGCCTAGGGAAACTCCAGGGGATGA  850

seq1  AATGCCATTTCATTTGTGTGTTGAAAAAGCTTGAAGAGTGGCTTTTTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCATTTCATTTGTGTGTTGAAAAAGCTTGAAGAGTGGCTTTTTTCT  900

seq1  TTACTTGGCCATTATGTAGTCAAATTTGACCTTTGAAAAAATATGTTTAT  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTACTTGGCCATTATGTAGTCAAATTTGACCTTTG-AAAAATATGTTTAT  949

seq1  GTTGTCCTCAAAGCCTAAATCTATTAAGCCCACACTGTAGCCTTCATGGA  1000
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTGTCCTCAAAGCCTAAATCTA-TAAGCCCACACTGTAGCCTTCATGGA  998

seq1  AGACCTTTCTGGTGTTTCAAATGCATTACTAGACTATTTAATTCAGTTTT  1050
      ||||||||||||||||||||||||| ||||||||||||||| |||| |||
seq2  AGACCTTTCTGGTGTTTCAAATGCA-TACTAGACTATTTAA-TCAG-TTT  1045

seq1  TCTCAGCATAGAATCAGGGAAGAGTAAAGACCATGTGGTTTGGGTGTAAA  1100
      ||||||||||| ||||||  ||||| |||| |||||||||||||||| ||
seq2  TCTCAGCATAG-ATCAGG--AGAGT-AAGAACATGTGGTTTGGGTGT-AA  1090

seq1  ACACTGTGTCTAGCCCACTTCTAAGATTCACCACTTGTGAGCCCTGGAT-  1149
      |||||| ||||||  ||||||||||| ||| |||||||||   |||||| 
seq2  ACACTG-GTCTAG--CACTTCTAAGA-TCA-CACTTGTGA--ACTGGATA  1133

seq1  ACAGAGATGA  1159
      ||||| ||||
seq2  ACAGAAATGA  1143


seq1: chr7_95388769_95389649
seq2: B6Ng01-332K03.g_66_946 (reverse)

seq1  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC  50

seq1  TTCCTTCCTTTCTCTTTTCTACTCAAATACTTGTTTATTTTTTCATATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTTCTCTTTTCTACTCAAATACTTGTTTATTTTTTCATATCC  100

seq1  CATTGCTCCGTTCCCAACATTCAGCCATCTGTACATTTCATAAATCCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTCCGTTCCCAACATTCAGCCATCTGTACATTTCATAAATCCTTA  150

seq1  TCACAGAAGGGATAGATATCTCTGTACAGCCTTGCTTCTTTCCTAGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAGGGATAGATATCTCTGTACAGCCTTGCTTCTTTCCTAGTTGT  200

seq1  TAGACAATAATAATGATGTGATCATTAAGTTAGTTTGACAATAAAGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAATAATAATGATGTGATCATTAAGTTAGTTTGACAATAAAGATAA  250

seq1  AACATGTACAAATGGAATCTAAGACTATGTCTGACAGCAATTTATTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTACAAATGGAATCTAAGACTATGTCTGACAGCAATTTATTGAAC  300

seq1  TCATACTTCCTTTTCCTATTCCTTTTCTATTTATAAAGTTAATCTTTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTTCCTTTTCCTATTCCTTTTCTATTTATAAAGTTAATCTTTAGC  350

seq1  AAGGAAAATATGTCTGTGGGATCAGTGCTATGGGGGGAAATAGACAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAATATGTCTGTGGGATCAGTGCTATGGGGGGAAATAGACAAAGT  400

seq1  GCTACCCTAACATCTCAGCTGAGGATGAAGGAAGTGGAAGAGTCTCGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCCTAACATCTCAGCTGAGGATGAAGGAAGTGGAAGAGTCTCGGGA  450

seq1  CAAAGAAGCCTACAGTGGGGTAAATGATGTGGCCTCATTTTGTCTACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGCCTACAGTGGGGTAAATGATGTGGCCTCATTTTGTCTACTTG  500

seq1  AAAATAAATGATAGCAATCGTAACTTAATGAAGACTTCCTTCAGTCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATGATAGCAATCGTAACTTAATGAAGACTTCCTTCAGTCTTCT  550

seq1  CAAAACAGTTCACTTGCATTAGCAGATATAGCTGATATATAGGGCTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAGTTCACTTGCATTAGCAGATATAGCTGATATATAGGGCTTGAT  600

seq1  GATAGTTTTTTAAGAAGAATTAGGCATTTGGAGCATATTATTTTCCTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTTTTTAAGAAGAATTAGGCATTTGGAGCATATTATTTTCCTTGG  650

seq1  GTTGGCCCTGACTCAGAACTGCTGTCGGCCAATTACAGTAACAGAGCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCCTGACTCAGAACTGCTGTCGGCCAATTACAGTAACAGAGCAAC  700

seq1  ACTGATTTCTTCTCCAATTGTCTGCTCCTAAGCAACTAATACATGGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTTCTTCTCCAATTGTCTGCTCCTAAGCAACTAATACATGGCATT  750

seq1  CGTGTTCCCTTTAGGCTTCTTCTTGTCCTGCAAAACATCTATATATCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTCCCTTTAGGCTTCTTCTTGTCCTGCAAAACATCTATATATCTTT  800

seq1  CAACAAATCTTCCTATTCTGCAAAGTTCACCTCTCTAATTATTCACTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATCTTCCTATTCTGCAAAGTTCACCTCTCTAATTATTCACTGTT  850

seq1  GTTTCTGGCTTAAGAACAGCATTAGGAATTC  881
      |||||||||||||||||||||||||||||||
seq2  GTTTCTGGCTTAAGAACAGCATTAGGAATTC  881


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