BAC Information

Click to search

BAC

Clone NameB6Ng01-332L12
Chromosome7 (Build37)
Map Location 7,376,537 - 7,536,490
singlet/doubletdoublet
Overlap geneVmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33
Upstream geneLOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31
Downstream geneLOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332L12.bB6Ng01-332L12.g
ACCGA118738GA118739
length4691,024
definitionB6Ng01-332L12.b B6Ng01-332L12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,376,537 - 7,376,984)(7,535,449 - 7,536,490)
sequence
gaattctttctatatttttgatattgttgaaaagggtgttacactttccc
atcaaagatcagagtatatttcccccggccatcattttctttttctcttt
ctttctttctttctttctttctttctttctttctttctttctttctttct
ttctttctttctttctttctttttttcttccttccttcctttcttccttt
ctatctttcttcctttcttcctttcttcctttctctcttcctttaccttt
ctctctctctctctctctctctctctctttctttctttcttcctttcttc
ctttctatctttcttcctttcttcctttctctcttcctttacctttccct
ctttctctctctctctctctctctctctctctctctctctctctctctct
ctctctctctctttctttctgtcttcctgtctccctcccatccttccttg
ctcccttcctctccttcct
gaattccttggacaaagtgatgttatatgtaaatgggaattctacacaaa
caccctgaaatagactgtccttttcaaagccagccaaaacataaaaatct
ggtagtcaaacactgttggtaccttcttttatcactgattaaccatagca
taattaccaaatacaagggacagtaggaaaatttttgtgactcacaaatg
ccctgttcccctacctcgaaattaatcttatataaactgaatgtactcag
gacttgagagcaaaagtgtgaaaatacaatcacattgatatttgagccca
aatgagaccaactcattgcctccacttgactattctatctattgtagaca
ggatttcttgaggtttgtgggatgagaccaattctcagcgttgcttgcaa
actaatcagagttaatacaccttcacaactgctgataatcctggcttgct
cattcttttttctactttgtatttttgtcaactctttatcattcactctg
aaaattgttagttttggagctgtgctacttataaaatatttaggaagcac
tacatggcaataaatgagtgttagatactcctcatatatatctatgtggc
gcaatgcatgaaaatataagtatcattaatcgcagtatactttaatacaa
gtttatataatattacatatatgtatatgtatatatatatatatatatat
atatatatatatatgtatacatatatacacatgtatacacgtacacagag
atatatgatttacctttgtgccttaaatagggcctgatatgtatacggct
tttatagaaaaaatttgaatcctattcctaacattcactggtataaaaac
aggctaagcaaaaaaaatcaaaacaaaaaatcaaacaaacaaacaaaaaa
ctatttttattatcaggctgtcatgcaactcttctgtagaccatgatggc
ctcaaatcaaaaatctgcctgcctttgctacaagtgctgggattgaaggg
gttagccaccacctgccagctgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7376537_7376984
seq2: B6Ng01-332L12.b_43_511

seq1  GAATTCTTTCTATATTTTTGATATTGTTGAAAAGGGTGTTACACTTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTATATTTTTGATATTGTTGAAAAGGGTGTTACACTTTCCC  50

seq1  ATCAAAGATCAGAGTATATTTCCCCCGGCCATCATTTTCTTTTTCTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGATCAGAGTATATTTCCCCCGGCCATCATTTTCTTTTTCTCTTT  100

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  150

seq1  TTCTTTCTTTCTTTCTTTCTTTTTTTCTTCCTTCCTTCCTTTCTTCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTTTTTCTTCCTTCCTTCCTTTCTTCCTTT  200

seq1  CTATCTTTCTTCCTTTCTTCCTTTCTTCCTTTCTCTCTTCCTTTACCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTTCTTCCTTTCTTCCTTTCTTCCTTTCTCTCTTCCTTTACCTTT  250

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTCCTTTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTCCTTTCTTC  300

seq1  CTTTCTATCTTTCTTCCTTTCTTCCTTTCTCTCTTCCTTTACCTTTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATCTTTCTTCCTTTCTTCCTTTCTCTCTTCCTTTACCTTTCCCT  350

seq1  CTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  400

seq1  CTCTCTCCCCCTTTCTT--------------------CCTTCCTTCCTTC  430
      ||||||| | |||||||                    || ||||||||| 
seq2  CTCTCTCTCTCTTTCTTTCTGTCTTCCTGTCTCCCTCCCATCCTTCCTTG  450

seq1  CTTCCTTCCT-TCCTTCCT  448
      || ||||||| ||||||||
seq2  CTCCCTTCCTCTCCTTCCT  469

seq1: chr7_7535449_7536490
seq2: B6Ng01-332L12.g_68_1091 (reverse)

seq1  GGCAGCTGGGCAGTGGTGGCACACACCTTTAATCCCAGCACTTGGTAGGC  50
      |||||||||   ||||||||  || |||| ||||||||||||| ||| ||
seq2  GGCAGCTGGCAGGTGGTGGCTAACCCCTTCAATCCCAGCACTT-GTA-GC  48

seq1  AAAGGCAGGCAGATTTTTGATTTTGAGGCCATCATGGTCTACAGAATGAG  100
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  AAAGGCAGGCAGATTTTTGA-TTTGAGGCCATCATGGTCTACAGAA-GAG  96

seq1  TTCCATGACAGCCTGATAATAAATATAGTTTTTTTGTTTTGTTTTGTTTT  150
      || |||||||||||||||||||| ||||||||||   |||||||   |||
seq2  TTGCATGACAGCCTGATAATAAAAATAGTTTTTT--GTTTGTTT--GTTT  142

seq1  GATTTTTTTGTTTTTGATTTTTTTTTTTGGCTTTAGCCTG-TTTTATACC  199
      ||||||||   ||||||||||||||    || |||||||| |||||||||
seq2  GATTTTTT--GTTTTGATTTTTTTT----GC-TTAGCCTGTTTTTATACC  185

seq1  AGTTGAATGTTAGGAATATGATTGCAAATTTTTCCCATAAAAGCCGTACT  249
      || ||||||||||||||| |||| ||||||||| | |||||||||||| |
seq2  AG-TGAATGTTAGGAATAGGATT-CAAATTTTTTCTATAAAAGCCGTA-T  232

seq1  ACATATCAGGCCCTATTCAAGGCACAAAGGTAAAAAATAATAAATTTGTG  299
      ||||||||||||||||| ||||||||||||||||  || |||  | ||||
seq2  ACATATCAGGCCCTATTTAAGGCACAAAGGTAAATCAT-ATATCTCTGTG  281

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTATACATATATATATATATATATATA  349
      |  |||| |   ||||| | | ||||||||||||||||||||||||||||
seq2  TACGTGTATACATGTGTATATATGTATACATATATATATATATATATATA  331

seq1  TATATATATATATACATATACATATATGTAATATTATATAAACTTGTATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATACATATACATATATGTAATATTATATAAACTTGTATT  381

seq1  AAAGTATACTGCGATTAATGATACTTATATTTTCATGCATTGCGCCACAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATACTGCGATTAATGATACTTATATTTTCATGCATTGCGCCACAT  431

seq1  AGATATATATGAGGAGTATCTAACACTCATTTATTGCCATGTAGTGCTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATATATGAGGAGTATCTAACACTCATTTATTGCCATGTAGTGCTTC  481

seq1  CTAAATATTTTATAAGTAGCACAGCTCCAAAACTAACAATTTTCAGAGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATTTTATAAGTAGCACAGCTCCAAAACTAACAATTTTCAGAGTG  531

seq1  AATGATAAAGAGTTGACAAAAATACAAAGTAGAAAAAAGAATGAGCAAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAAAGAGTTGACAAAAATACAAAGTAGAAAAAAGAATGAGCAAGC  581

seq1  CAGGATTATCAGCAGTTGTGAAGGTGTATTAACTCTGATTAGTTTGCAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTATCAGCAGTTGTGAAGGTGTATTAACTCTGATTAGTTTGCAAG  631

seq1  CAACGCTGAGAATTGGTCTCATCCCACAAACCTCAAGAAATCCTGTCTAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGCTGAGAATTGGTCTCATCCCACAAACCTCAAGAAATCCTGTCTAC  681

seq1  AATAGATAGAATAGTCAAGTGGAGGCAATGAGTTGGTCTCATTTGGGCTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATAGAATAGTCAAGTGGAGGCAATGAGTTGGTCTCATTTGGGCTC  731

seq1  AAATATCAATGTGATTGTATTTTCACACTTTTGCTCTCAAGTCCTGAGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAATGTGATTGTATTTTCACACTTTTGCTCTCAAGTCCTGAGTA  781

seq1  CATTCAGTTTATATAAGATTAATTTCGAGGTAGGGGAACAGGGCATTTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTTTATATAAGATTAATTTCGAGGTAGGGGAACAGGGCATTTGT  831

seq1  GAGTCACAAAAATTTTCCTACTGTCCCTTGTATTTGGTAATTATGCTATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACAAAAATTTTCCTACTGTCCCTTGTATTTGGTAATTATGCTATG  881

seq1  GTTAATCAGTGATAAAAGAAGGTACCAACAGTGTTTGACTACCAGATTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATCAGTGATAAAAGAAGGTACCAACAGTGTTTGACTACCAGATTTT  931

seq1  TATGTTTTGGCTGGCTTTGAAAAGGACAGTCTATTTCAGGGTGTTTGTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTGGCTGGCTTTGAAAAGGACAGTCTATTTCAGGGTGTTTGTGT  981

seq1  AGAATTCCCATTTACATATAACATCACTTTGTCCAAGGAATTC  1042
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCCCATTTACATATAACATCACTTTGTCCAAGGAATTC  1024