BAC Information

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BAC

Clone NameB6Ng01-333A13
Chromosome7 (Build37)
Map Location 14,101,558 - 14,244,225
singlet/doubletdoublet
Overlap gene9230107M04Rik, EG666256, LOC666267
Upstream gene2900092C05Rik, EG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243
Downstream geneLOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333A13.bB6Ng01-333A13.g
ACCGA118962GA118963
length1,1441,122
definitionB6Ng01-333A13.b B6Ng01-333A13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,243,072 - 14,244,225)(14,101,558 - 14,102,669)
sequence
gaattcacctataaaaagacatacaataacagattggttatgtaaaaagg
accccactttttgctgcatacagaaaatccacctcaggcataaaggaaga
cactacctcacagcaaaaggctggaaaacgattttccaagcaaatggtcc
caagaaccaagctggagtagccactctaatatgaaataaaatggactttc
ttttttttttaaatggctcatcataatttattttatattaaaatgtacag
cttttcttgggggggttccttcttttttttgaagtaactgactaaaaaga
aaactgttaaatataagagttctgctggctcctactttatacaaggtcgt
gcacacctgtccttcttggcccttaatgtcatctgtccaggtgcaaaggc
tacaaaaggaagcaatagaaacagacacaaataacttttctgctttttta
cttgagatgtgtaagattactttgtgctattcacaagctacttttctatt
tttccttaaaaaataattccaatattttataaagatagaaaaatctacag
atggaatgaaaatgtaaagttagaggcatttccataaaatagcaacttta
caccaaattcatgatttaaaaaaaaacttgccaagtatttggacatatat
gaaatgcttcaaaacctgacagataaacactgagatatgcttcatttaat
aaatagaagtgtgcatttataaaacagaaagctgcctctccccataggag
tctgccaccaaaatggaaaatggttttctcaactttacaccaaacattta
gcgataaacccccttcactaaccagacggggatagctctgatagctcttt
acagttttatagtgaacaaaaatacagtcttttttaaaccctcaaattag
ggtaccctaatcaaggcaaaagacttaagaagtggcttaccgttagcaca
acacttgtacagtactacaaatgcactgtcaccaccaaagacattagtgg
catactgaagggtcaccttaaacaaaatatacagtaatgaaatgctaagg
catttccatggagtagacagagaagaaaagctggaggtcagtattaaaca
gtgattggggagggttgtatgcacactgtttatggagacagcag
gaattcttactatggaggtttatttatgataatttgtctcagaggcagaa
gtgagagttaaataagatttatcagacttgaggatggagtgttttccatt
gagctaagtagatgctttttgaattgtattaatttatgtttgcttattca
gtgagcagttggtggtgccatgatatgcaatgaacacaaggaagttggta
acaacttcggcaatttggcacagaacacactcttctttaatgcacaccca
ggattagtaactggtttcatatattgttgcaaataatgcctaaaattcca
catactcctcagaattatatatattaactgaaagtgctagtttgtaaaaa
cacacacagttaccaaggttatcattggaaatgatttttaaagtaacttg
caagtcaagttaaagttaaagtaattactggttttttctttggcaagaat
ggacatgagaactatcttacaatgtatagttctcatgtccattgctttat
ctatactatgttacaaaatccttattccccaaactgggggaaaagcatgg
tatattcattcaaaacaacaggggcatagcatgttatttgctattccatt
tgtcttgggacagagtattaaaaattgaagtataaatgtgagttacagat
aaaaaatgtagagtagacatcaggcagcaacagtctggaaaatattaact
catggatggatgaagacactacttttcaaaggttctgcaagttgttgcag
tgttcaaacatgtcaccatcaaatcaccacaatgggatgctgggcatctg
aagaaaaaggggtgagtaaatatgaccggatactctgaggaatatgtttg
gggacaacaatgatgaaatgaaaatgaccttacataaaaatagaattgcg
tatggatgagagaggactaggactcagatccctttgggttagggagaagg
aaatatgtcatctctctgtttgtaaatttgtgcagtggaccaccacacac
accaaaccagaactcctacctccttcatctacggttacctcctacctctt
aattctaaaatacctcatgatgttgacaacctgatatttcttatggctgg
tgactatgagcatagaatatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14243072_14244225
seq2: B6Ng01-333A13.b_50_1193 (reverse)

seq1  CTGCT---TCCATTAAACAGTGTGCATACAAACCCCTCCCCAAATCACCT  47
      |||||   |||| ||||||||||||||||||  |||||||| ||||| ||
seq2  CTGCTGTCTCCA-TAAACAGTGTGCATACAA--CCCTCCCC-AATCA-CT  45

seq1  GTTTTAATACTGAACCTCCAGCTTTTCTTCTTCCTTGTCTACTCCATGGA  97
      | |||||||||| ||||||||||||||||||    |||||||||||||||
seq2  G-TTTAATACTG-ACCTCCAGCTTTTCTTCT---CTGTCTACTCCATGGA  90

seq1  AATGCCTTTAGCATTTCAATTACTGTATATTTTGTTTAAGGTGACCCTTC  147
      |||||| |||||||||| ||||||||||||||||||||||||||||||||
seq2  AATGCC-TTAGCATTTC-ATTACTGTATATTTTGTTTAAGGTGACCCTTC  138

seq1  AGTATGCCACTAATGTCTTTGGTGGTGACAGTGCATTTTGTAGTACTGTA  197
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTATGCCACTAATGTCTTTGGTGGTGACAGTGCA-TTTGTAGTACTGTA  187

seq1  CAAGTGTTGTGCTAACGGTAAGCCACTTCTTAAGTCTTTTGCCTTGATTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTGTGCTAACGGTAAGCCACTTCTTAAGTCTTTTGCCTTGATTA  237

seq1  GGGTACCCTAATTTGAGGGTTTAAAAAAGACTGTATTTTTGTTCACTATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACCCTAATTTGAGGGTTTAAAAAAGACTGTATTTTTGTTCACTATA  287

seq1  AAACTGTAAAGAGCTATCAGAGCTATCCCCGTCTGGTTAGTGAAGGGGGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTAAAGAGCTATCAGAGCTATCCCCGTCTGGTTAGTGAAGGGGGT  337

seq1  TTATCGCTAAATGTTTGGTGTAAAGTTGAGAAAACCATTTTCCATTTTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCGCTAAATGTTTGGTGTAAAGTTGAGAAAACCATTTTCCATTTTGG  387

seq1  TGGCAGACTCCTATGGGGAGAGGCAGCTTTCTGTTTTATAAATGCACACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGACTCCTATGGGGAGAGGCAGCTTTCTGTTTTATAAATGCACACT  437

seq1  TCTATTTATTAAATGAAGCATATCTCAGTGTTTATCTGTCAGGTTTTGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTATTAAATGAAGCATATCTCAGTGTTTATCTGTCAGGTTTTGAA  487

seq1  GCATTTCATATATGTCCAAATACTTGGCAAGTTTTTTTTTAAATCATGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCATATATGTCCAAATACTTGGCAAGTTTTTTTTTAAATCATGAA  537

seq1  TTTGGTGTAAAGTTGCTATTTTATGGAAATGCCTCTAACTTTACATTTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGTAAAGTTGCTATTTTATGGAAATGCCTCTAACTTTACATTTTC  587

seq1  ATTCCATCTGTAGATTTTTCTATCTTTATAAAATATTGGAATTATTTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATCTGTAGATTTTTCTATCTTTATAAAATATTGGAATTATTTTTT  637

seq1  AAGGAAAAATAGAAAAGTAGCTTGTGAATAGCACAAAGTAATCTTACACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAATAGAAAAGTAGCTTGTGAATAGCACAAAGTAATCTTACACA  687

seq1  TCTCAAGTAAAAAAGCAGAAAAGTTATTTGTGTCTGTTTCTATTGCTTCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGTAAAAAAGCAGAAAAGTTATTTGTGTCTGTTTCTATTGCTTCC  737

seq1  TTTTGTAGCCTTTGCACCTGGACAGATGACATTAAGGGCCAAGAAGGACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAGCCTTTGCACCTGGACAGATGACATTAAGGGCCAAGAAGGACA  787

seq1  GGTGTGCACGACCTTGTATAAAGTAGGAGCCAGCAGAACTCTTATATTTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCACGACCTTGTATAAAGTAGGAGCCAGCAGAACTCTTATATTTA  837

seq1  ACAGTTTTCTTTTTAGTCAGTTACTTCAAAAAAAAGAAGGAACCCCCCCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTCTTTTTAGTCAGTTACTTCAAAAAAAAGAAGGAACCCCCCCA  887

seq1  AGAAAAGCTGTACATTTTAATATAAAATAAATTATGATGAGCCATTTAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGCTGTACATTTTAATATAAAATAAATTATGATGAGCCATTTAAA  937

seq1  AAAAAAAGAAAGTCCATTTTATTTCATATTAGAGTGGCTACTCCAGCTTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGAAAGTCCATTTTATTTCATATTAGAGTGGCTACTCCAGCTTG  987

seq1  GTTCTTGGGACCATTTGCTTGGAAAATCGTTTTCCAGCCTTTTGCTGTGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGGGACCATTTGCTTGGAAAATCGTTTTCCAGCCTTTTGCTGTGA  1037

seq1  GGTAGTGTCTTCCTTTATGCCTGAGGTGGATTTTCTGTATGCAGCAAAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTGTCTTCCTTTATGCCTGAGGTGGATTTTCTGTATGCAGCAAAAA  1087

seq1  GTGGGGTCCTTTTTACATAACCAATCTGTTATTGTATGTCTTTTTATAGG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTCCTTTTTACATAACCAATCTGTTATTGTATGTCTTTTTATAGG  1137

seq1  TGAATTC  1154
      |||||||
seq2  TGAATTC  1144

seq1: chr7_14101558_14102669
seq2: B6Ng01-333A13.g_66_1187

seq1  GAATTCTTACTATGGAGGTTTATTTATGATAATTTGTCTCAGAGGCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTATGGAGGTTTATTTATGATAATTTGTCTCAGAGGCAGAA  50

seq1  GTGAGAGTTAAATAAGATTTATCAGACTTGAGGATGGAGTGTTTTCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGTTAAATAAGATTTATCAGACTTGAGGATGGAGTGTTTTCCATT  100

seq1  GAGCTAAGTAGATGCTTTTTGAATTGTATTAATTTATGTTTGCTTATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAGTAGATGCTTTTTGAATTGTATTAATTTATGTTTGCTTATTCA  150

seq1  GTGAGCAGTTGGTGGTGCCATGATATGCAATGAACACAAGGAAGTTGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCAGTTGGTGGTGCCATGATATGCAATGAACACAAGGAAGTTGGTA  200

seq1  ACAACTTCGGCAATTTGGCACAGAACACACTCTTCTTTAATGCACACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTCGGCAATTTGGCACAGAACACACTCTTCTTTAATGCACACCCA  250

seq1  GGATTAGTAACTGGTTTCATATATTGTTGCAAATAATGCCTAAAATTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAGTAACTGGTTTCATATATTGTTGCAAATAATGCCTAAAATTCCA  300

seq1  CATACTCCTCAGAATTATATATATTAACTGAAAGTGCTAGTTTGTAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTCCTCAGAATTATATATATTAACTGAAAGTGCTAGTTTGTAAAAA  350

seq1  CACACACAGTTACCAAGGTTATCATTGGAAATGATTTTTAAAGTAACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAGTTACCAAGGTTATCATTGGAAATGATTTTTAAAGTAACTTG  400

seq1  CAAGTCAAGTTAAAGTTAAAGTAATTACTGGTTTTTTCTTTGGCAAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAAGTTAAAGTTAAAGTAATTACTGGTTTTTTCTTTGGCAAGAAT  450

seq1  GGACATGAGAACTATCTTACAATGTATAGTTCTCATGTCCATTGCTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGAGAACTATCTTACAATGTATAGTTCTCATGTCCATTGCTTTAT  500

seq1  CTATACTATGTTACAAAATCCTTATTCCCCAAACTGGGGGAAAAGCATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTATGTTACAAAATCCTTATTCCCCAAACTGGGGGAAAAGCATGG  550

seq1  TATATTCATTCAAAACAACAGGGGCATAGCATGTTATTTGCTATTCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCATTCAAAACAACAGGGGCATAGCATGTTATTTGCTATTCCATT  600

seq1  TGTCTTGGGACAGAGTATTAAAAATTGAAGTATAAATGTGAGTTACAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGGACAGAGTATTAAAAATTGAAGTATAAATGTGAGTTACAGAT  650

seq1  AAAAAATGTAGAGTAGACATCAGGCAGCAACAGTCTGGAAAATATTAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGTAGAGTAGACATCAGGCAGCAACAGTCTGGAAAATATTAACT  700

seq1  CATGGATGGATGAAGACACTACTTTTCAAAGGTTCTGCAAGTTGTTGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATGGATGAAGACACTACTTTTCAAAGGTTCTGCAAGTTGTTGCAG  750

seq1  TGTTCAAACATGTCACCATCAAATCACCACAATGGGATGCTTGGCATCTG  800
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTTCAAACATGTCACCATCAAATCACCACAATGGGATGCTGGGCATCTG  800

seq1  AAGAAAAAGGGGTGAGTAAATATGACCGGATAACTCTGAGGAATAGTGTT  850
      ||||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  AAGAAAAAGGGGTGAGTAAATATGACCGGAT-ACTCTGAGGAATA-TGTT  848

seq1  TGGGGACAACAGTGATGAAATGTAAATGTCCTTA-AAGAAGATTGCGTTT  899
      ||||||||||| |||||||||| ||||| ||||| |  || || |  || 
seq2  TGGGGACAACAATGATGAAATGAAAATGACCTTACATAAAAATAGAATTG  898

seq1  TGGATGTTTGAGAAATGACAAGGAGTCCG-------TTGGTTTGAGTG-A  941
       | |||  ||||| | ||| |||| || |       | |||| | | | |
seq2  CGTATGGATGAGAGAGGACTAGGACTCAGATCCCTTTGGGTTAGGGAGAA  948

seq1  GGGAAGATGTGATCTGTCTGTTTGTGATATTTTGCATTGG-CAACCACAG  990
      || || |||| |||| ||||||||| |  || |||| ||| | |||||| 
seq2  GGAAATATGTCATCTCTCTGTTTGTAAATTTGTGCAGTGGACCACCACA-  997

seq1  CAGACCAATACAGTAGATTCATAC--GCCTCATCTACAGTTAC--TCTA-  1035
      || |||||  |||   | || |||   | |||||||| |||||   ||| 
seq2  CACACCAAACCAG--AACTCCTACCTCCTTCATCTACGGTTACCTCCTAC  1045

seq1  CTCTTAAATTCTTAAATA-CTCATGATGTTTGACAACCTGATA-TTCTTA  1083
      ||||| |||||| ||||| ||||||||| |||||||||||||| ||||||
seq2  CTCTT-AATTCTAAAATACCTCATGATG-TTGACAACCTGATATTTCTTA  1093

seq1  T-GCTGTGTGACTATGAAGCATAG-ATATTA  1112
      | |||| ||||||||| ||||||| ||||||
seq2  TGGCTG-GTGACTATG-AGCATAGAATATTA  1122