BAC Information

Click to search

BAC

Clone NameB6Ng01-333J06
Chromosome7 (Build37)
Map Location 14,145,918 - 14,147,056
singlet/doubletsinglet
Overlap gene9230107M04Rik
Upstream geneEG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243
Downstream geneEG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333J06.bB6Ng01-333J06.g
ACCGA119335GA119336
length1,1381,235
definitionB6Ng01-333J06.b B6Ng01-333J06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgattagtgaaacatgcaactataatttggcacaggtgattatg
gctttgactctggaacctttttcattatgtgctttcctgacttatcaaga
tgtccaaaacttctttccaagttccccactgccctccacaaatattcttt
gtcctgtcaacagcaggagcagcaggagcagcaggagcagcagcagcagc
agcagcagtagcagcagcagcatatctttgtcttctcataatgtattgct
ccatggtgaagggttcactcttaactactaacccacctccactgattatg
tacttatattttcttgatcttaaaataagaaatagtttcagatggcttat
gctctgagcattaaaattttctgtttgtaataggatagctatattactta
cctcaatttaagaacccatggtatatatatatatatatatatatatatat
atatatatatccaaatattatttttaacatgtataagtatataattatta
tttgtcaatgacaaaggaaataataaaatgcagaaacctacattgtctta
tcttgttcctaatggagaagggagtatttttcttgagtgaccaggagttg
gtcactaacctggatcttcaatatctggtttgaccactatgacccatttc
agaagaataatgcaagaaaagttacatgtctaaaaagtgtcagaacctcc
tcaaacctaatgctttataaggggtgataatttagttgctgcccaataga
gttggttgcttaccttgttctggaggatgtaaatgagagatcaattctga
aagacaaaatgaatgggcaaaatgtaagccacctcccaaaaactgcattc
ccagactaactatgaaatacataaaacattctgcaatgtcatatcaagtt
ggagttgagtatttatcctggaaatgtcacatcaagttatgaaaaccagg
aagtctggagctgaccctgtgcacagttttcatacccaagccctgccttg
agagagttaatatctcagagtgctgacacatcttgggggcacaaggtagg
atcatcacttctgctcaatattcttggcctagaagggacccacccagagc
ttctcagaaacacaggactgagaacagctgggacagga
gaattcttataggaacatcattaagacttaagaagtcatcaatttgtata
tatagcatcatttaaaaaaatgcatcttaatgtatctgcagtgatctgct
ccaaaggcttgtgctgttacttaatgattgttatatatgtttaatagcaa
caggaaaaatatattaatagtacgaatctttcctaatatgtatttcctta
aggcatttcccaataagggcaaacctgtcacagattatgtaataatcaga
agcaggccatctcagaaagatcacctgctagttattagcttgtcacatta
tggctcctgacaatcaagaattgataaataggaccttatgaaactaaaaa
gcttctccaaggcaaagggcatagtcaataggacaaacaggcaaattaca
gattgggaaaaaaaactttagtaaccccacatcaaatgaggggttaataa
tcaaaatgtataaagaagtcaaggggctaacctccccaaaaccaacccac
caataagaaaatggagagtagagctaaacagagaatttaagagagaggaa
tttcaaatgaccaagaagcagttagaaaatattcaaactccttagtggtc
agggaaatgcaaatcaaaatgacactgataccttgagatcccacctcaca
caagtcagaatggctaagatcaaaaactcaggtgacagcagatgctggtg
agtatgtagagaaagtggtgcactcttccattgctagtgtgattgcaagg
tggtaagaacactctggaaatcaatctggtggatcctcagaaaataggat
atagtactgcccaaggacccagatataccaacttcctgcacatataccca
aaagatactccaacatgtaataaggacacatacacttgttccactatgtt
catagcagccatatttaaaatagcccaaacctgtaaacaacccagatgtc
cctcaacagaagaatggaatatgggaaaattgggtacaatttacacatga
aaatacttacctcagctattaaaaacgatgacttcatggaaattcaacag
caaataatggactggaaaataatcttgagtgaggtaactcagtcacagaa
gagcaatacagtatatactcactgataactggatataagcccaagtcaga
aacatatacaaggttcaatcagaaccatatgttagctagcaaagtgagaa
caattgtgtgaattcttaagaggtgctcttcttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14145918_14147056
seq2: B6Ng01-333J06.b_46_1183

seq1  GAATTCTGATTAGTGAAACATGCAACTATAATTTGGCACAGGTGATTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATTAGTGAAACATGCAACTATAATTTGGCACAGGTGATTATG  50

seq1  GCTTTGACTCTGGAACCTTTTTCATTATGTGCTTTCCTGACTTATCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGACTCTGGAACCTTTTTCATTATGTGCTTTCCTGACTTATCAAGA  100

seq1  TGTCCAAAACTTCTTTCCAAGTTCCCCACTGCCCTCCACAAATATTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAAACTTCTTTCCAAGTTCCCCACTGCCCTCCACAAATATTCTTT  150

seq1  GTCCTGTCAACAGCAGGAGCAGCAGGAGCAGCAGGAGCAGCAGCAGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTCAACAGCAGGAGCAGCAGGAGCAGCAGGAGCAGCAGCAGCAGC  200

seq1  AGCAGCAGTAGCAGCAGCAGCATATCTTTGTCTTCTCATAATGTATTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGTAGCAGCAGCAGCATATCTTTGTCTTCTCATAATGTATTGCT  250

seq1  CCATGGTGAAGGGTTCACTCTTAACTACTAACCCACCTCCACTGATTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTGAAGGGTTCACTCTTAACTACTAACCCACCTCCACTGATTATG  300

seq1  TACTTATATTTTCTTGATCTTAAAATAAGAAATAGTTTCAGATGGCTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATATTTTCTTGATCTTAAAATAAGAAATAGTTTCAGATGGCTTAT  350

seq1  GCTCTGAGCATTAAAATTTTCTGTTTGTAATAGGATAGCTATATTACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAGCATTAAAATTTTCTGTTTGTAATAGGATAGCTATATTACTTA  400

seq1  CCTCAATTTAAGAACCCATGGTATATATATATATATATATATATATATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATTTAAGAACCCATGGTATATATATATATATATATATATATATAT  450

seq1  ATATATATATCCAAATATTATTTTTAACATGTATAAGTATATAATTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATCCAAATATTATTTTTAACATGTATAAGTATATAATTATTA  500

seq1  TTTGTCAATGACAAAGGAAATAATAAAATGCAGAAACCTACATTGTCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAATGACAAAGGAAATAATAAAATGCAGAAACCTACATTGTCTTA  550

seq1  TCTTGTTCCTAATGGAGAAGGGAGTATTTTTCTTGAGTGACCAGGAGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTCCTAATGGAGAAGGGAGTATTTTTCTTGAGTGACCAGGAGTTG  600

seq1  GTCACTAACCTGGATCTTCAATATCTGGTTTGACCACTATGACCCATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAACCTGGATCTTCAATATCTGGTTTGACCACTATGACCCATTTC  650

seq1  AGAAGAATAATGCAAGAAAAGTTACATGTCTAAAAAGTGTCAGAACCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATAATGCAAGAAAAGTTACATGTCTAAAAAGTGTCAGAACCTCC  700

seq1  TCAAACCTAATGCTTTATAAGGGGTGATAATTTAGTTGCTGCCCAATAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCTAATGCTTTATAAGGGGTGATAATTTAGTTGCTGCCCAATAGA  750

seq1  GTTGGTTGCTTACCTTGTTCTGGAGGATGTAAATGAGAGATCAATTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTGCTTACCTTGTTCTGGAGGATGTAAATGAGAGATCAATTCTGA  800

seq1  AAGACAAAATGAATGGGCAAAATGTAAGCCACCTCCCAAAAACTGCATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAATGAATGGGCAAAATGTAAGCCACCTCCCAAAAACTGCATTC  850

seq1  CCAGACTAACTATGAAATACATAAAACATTCTGCAATGTCATATCAAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTAACTATGAAATACATAAAACATTCTGCAATGTCATATCAAGTT  900

seq1  GGAGTTGAGTATTTATCCTGGAAATGTCACATCAAGTTATGAAAACCAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGAGTATTTATCCTGGAAATGTCACATCAAGTTATGAAAACCAGG  950

seq1  AAGTCTGGAGCTGACCCTGTGCCACAGTTTTTCATACCCAAGCCCTGCCT  1000
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  AAGTCTGGAGCTGACCCTGTG-CACAG-TTTTCATACCCAAGCCCTGCCT  998

seq1  TGAGAGAGTTAATATCTCAGGAGTGCTGACACATC-TGGGGGCAC-AGGT  1048
      ||||||||||||||||||| ||||||||||||||| ||||||||| ||||
seq2  TGAGAGAGTTAATATCTCA-GAGTGCTGACACATCTTGGGGGCACAAGGT  1047

seq1  AAGATCATCACTTCTGCTCAA-ATATCTGGCCTAAGAGGGACCCACCCAG  1097
      | ||||||||||||||||||| ||   |||||||  ||||||||||||||
seq2  AGGATCATCACTTCTGCTCAATATTCTTGGCCTAGAAGGGACCCACCCAG  1097

seq1  AGC-TCTCAG-AACACAGGAACTGAGGAACAGCCTGGGACAGGA  1139
      ||| |||||| |||||||| ||||| |||||| |||||||||||
seq2  AGCTTCTCAGAAACACAGG-ACTGA-GAACAG-CTGGGACAGGA  1138