BAC Information

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BAC

Clone NameB6Ng01-334D10
Chromosome7 (Build37)
Map Location 32,142,917 - 32,144,043
singlet/doubletsinglet
Overlap genenone
Upstream geneLrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe
Downstream geneLOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334D10.bB6Ng01-334D10.g
ACCGA119774GA119775
length9791,115
definitionB6Ng01-334D10.b B6Ng01-334D10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctatatgatgtaagaacacagattttcattcatgttcatttt
tttcaaacttttattatatattttcatcatttacatttccaatgctatcc
caaaagtccccaataccctccccacacttctctcctacccacccactccc
tcttcttcgccctggtgttcccatgtactatggcatataaagtttgcaag
accaagggacctctcttcccaatgatgaccgattagtccatcgtctgcta
cataagcagttatagtcacaagctctgggggtagtggttagttcatattg
ttgttccacctattgcgtttcagactcctccatatacgtgggtattttct
ctagctccttcattgggggcccagtattccatccaatacatgactatgag
caaccacttctgtatttgcaaggctctggcatagattaaccaaagacagc
tgtatcagggttctttcagcaaaatcttgctggcatatacaatagtgtct
gcatttggttgctgattatgggatggaaccccgggtcaggcagtctctgg
atggcccaacctatggtcccagctacaaactttgtctctgtaactccttc
catgggtattttattccccattataaggggggatgaagtattcacatatt
ggttttccttcttcttaagtgtcatgtgttttgcaaattgtatcttggat
attctaaatttctgggctaatatctatttatcagtgagtgcatatcattt
tgagttcttttgtgaatggtttcactcagtatgataccctccagatccat
ctattttacctaggaatttcataaattcactgtttttaatagctgagtag
tactccactgtgtaaaagttcaacatttttctatatccattcctctgttg
agggacatctgggtactttccatcttctggtattattaaataaggctgct
ttgaacatagaggagcatgttgttcctat
gaattcacctgtctcctctcatctctcaacaggagcactaggactataga
cacatgctaccaagtctggcattacaaggtttctgagagttgaactcaga
tccccaataatgcacaggaacactctacctattgagccttcttctcagtc
cttccctcttttccctgtcattgggcatccactcctatctctttccctat
tgaagtgttttgtttcttgttaagttttacatttatttaaaggtttattt
atttgtttgtttacttcatgaatatgagtacactgtcactgtctttagac
acaccaaaagaaggcatcatagatagttatgagccacaatgtggttgctg
ggaattgaactcagaacctctggaagtgcagccatatcttaactgctggg
ccattctccatccctttggttttgtttttgtcgaggatctctatgtagac
ctggatgtcctggaacttgctaagtcaaccaggctgggacagatggtgac
tgtcattagtagacaaaagaatctgagagaaacaccaatgtgatccctga
gttactcccctgttataactggaaacaaggagcctacagttctgtgataa
agcccagaggcaacacatgtctgtgcacctcctttctgtcctgccaacct
ggtgaagcctgtggctgtttacatgctatttgctctcagacaaccccagt
ctctacagtatcacatagctggggtaaactgagcatggaaggctcacacc
tataatccaagcactcaggaggaggacacatggatctctgtgaattccag
ggaaacctggtctacatagtaacaacaacaaaaaatctgcaatggctctc
ccaggatcaccctgccagtcaggtcagtcaccctgatctcagtgacctca
caagtcatttctctcactgtctctctgatcctctgaggacctcacatgat
tcctgttcagacatagacacaggcacagaacagagctgcagtatttatta
gaatcagcctaagaaactgaagatgaggcacagtgtcagaatccacttca
ggggaggaagagactgtcactaagatggtgctagaatcagaaatgttgca
tgattgattgcctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32142917_32144043
seq2: B6Ng01-334D10.g_63_1177

seq1  GAATTCACCTGTCTCCTCTCATCTCTCAACAGGAGCACTAGGACTATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGTCTCCTCTCATCTCTCAACAGGAGCACTAGGACTATAGA  50

seq1  CACATGCTACCAAGTCTGGCATTACAAGGTTTCTGAGAGTTGAACTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCTACCAAGTCTGGCATTACAAGGTTTCTGAGAGTTGAACTCAGA  100

seq1  TCCCCAATAATGCACAGGAACACTCTACCTATTGAGCCTTCTTCTCAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAATAATGCACAGGAACACTCTACCTATTGAGCCTTCTTCTCAGTC  150

seq1  CTTCCCTCTTTTCCCTGTCATTGGGCATCCACTCCTATCTCTTTCCCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTCTTTTCCCTGTCATTGGGCATCCACTCCTATCTCTTTCCCTAT  200

seq1  TGAAGTGTTTTGTTTCTTGTTAAGTTTTACATTTATTTAAAGGTTTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGTTTTGTTTCTTGTTAAGTTTTACATTTATTTAAAGGTTTATTT  250

seq1  ATTTGTTTGTTTACTTCATGAATATGAGTACACTGTCACTGTCTTTAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTGTTTACTTCATGAATATGAGTACACTGTCACTGTCTTTAGAC  300

seq1  ACACCAAAAGAAGGCATCATAGATAGTTATGAGCCACAATGTGGTTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAAAGAAGGCATCATAGATAGTTATGAGCCACAATGTGGTTGCTG  350

seq1  GGAATTGAACTCAGAACCTCTGGAAGTGCAGCCATATCTTAACTGCTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGAACTCAGAACCTCTGGAAGTGCAGCCATATCTTAACTGCTGGG  400

seq1  CCATTCTCCATCCCTTTGGTTTTGTTTTTGTCGAGGATCTCTATGTAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTCCATCCCTTTGGTTTTGTTTTTGTCGAGGATCTCTATGTAGAC  450

seq1  CTGGATGTCCTGGAACTTGCTAAGTCAACCAGGCTGGGACAGATGGTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGTCCTGGAACTTGCTAAGTCAACCAGGCTGGGACAGATGGTGAC  500

seq1  TGTCATTAGTAGACAAAAGAATCTGAGAGAAACACCAATGTGATCCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTAGTAGACAAAAGAATCTGAGAGAAACACCAATGTGATCCCTGA  550

seq1  GTTACTCCCCTGTTATAACTGGAAACAAGGAGCCTACAGTTCTGTGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCCCCTGTTATAACTGGAAACAAGGAGCCTACAGTTCTGTGATAA  600

seq1  AGCCCAGAGGCAACACATGTCTGTGCACCTCCTTTCTGTCCTGCCAACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGAGGCAACACATGTCTGTGCACCTCCTTTCTGTCCTGCCAACCT  650

seq1  GGTGAAGCCTGTGGCTGTTTACATGCTATTTGCTCTCAGACAACCCCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGCCTGTGGCTGTTTACATGCTATTTGCTCTCAGACAACCCCAGT  700

seq1  CTCTACAGTATCACATAGCTGGGGTAAACTGAGCATGGAAGGCTCACACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAGTATCACATAGCTGGGGTAAACTGAGCATGGAAGGCTCACACC  750

seq1  TATAATCCAAGCACTCAGGAGGAGGACACATGGATCTCTGTGAATTCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCCAAGCACTCAGGAGGAGGACACATGGATCTCTGTGAATTCCAG  800

seq1  GGAAACCTGGTCTACATAGTAACAACAACAAAAAATCTGCAATGGCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCTGGTCTACATAGTAACAACAACAAAAAATCTGCAATGGCTCTC  850

seq1  CCAGGATCACCCTGCCAGTCAGGGTCAGTCACCCTGATCTCAGTGACCTC  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCAGGATCACCCTGCCAGTCA-GGTCAGTCACCCTGATCTCAGTGACCTC  899

seq1  ACAAGTCATTTCTCTCACTGTCTCTCTGATCCTCTGAGGACCTCACATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCATTTCTCTCACTGTCTCTCTGATCCTCTGAGGACCTCACATGA  949

seq1  TTCCTGTTCAGGACATAGACACAGGGCACAGAACAGAGCTGCAGGTATTT  1000
      |||||||||| |||||||||||| ||||||||||||||||||| ||||||
seq2  TTCCTGTTCA-GACATAGACACA-GGCACAGAACAGAGCTGCA-GTATTT  996

seq1  ATTAGAATCAGCCTAAGAAACTGAAGGATGAGGGCACAGGTGTCAGGAAT  1050
      ||||||||||||||||||||||||| ||||| |||||| |||||| ||||
seq2  ATTAGAATCAGCCTAAGAAACTGAA-GATGA-GGCACA-GTGTCA-GAAT  1042

seq1  CCAACTTCAGGTGAGGAAGAGGACAGGTCACTAAGATGGTGCTTAGATCA  1100
      || |||||||| |||||||| |||  |||||||||||||||||   ||||
seq2  CC-ACTTCAGGGGAGGAAGA-GAC-TGTCACTAAGATGGTGCTAGAATCA  1089

seq1  GACATGTTGCAATGATGGATTGCCTAA  1127
      || ||||||| ||||| ||||||||||
seq2  GAAATGTTGC-ATGATTGATTGCCTAA  1115