BAC Information

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BAC

Clone NameB6Ng01-334N10
Chromosome7 (Build37)
Map Location 25,679,214 - 25,679,706
singlet/doubletsinglet
Overlap genenone
Upstream geneV1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19
Downstream geneCd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334N10.bB6Ng01-334N10.g
ACCGA120245GA120246
length1,0251,191
definitionB6Ng01-334N10.b B6Ng01-334N10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattttccctgggtatttcatctcttccaggtcacaaggaaagcc
accattatatcttcttctagcatctctcctccttttctgccttcttccta
ctgaattctcaggaatattataactgccttcactttaccagttattagct
ggtgagtacctaccagtgtccattttgggctgaacccctcttggtcatat
tccatccttgattacttcactacatctaatgatgctccagattcatcttc
tagtaaatttcctatgggcttctgaagtgtgtatttgcctcctcctggcc
tttgctgacatgtctagacatttcacacattagagtggtcttgtcttgtc
ttatcttgtctttgtccttcatgctggcattgaatgagccctccaatcct
gaccacctctcttctttctgtctccatcttgactatgtattaagcttttt
ttttcttttttttatattttttattacatattttcctcaattacatttcc
aatgctatcccaaaagtcccccataccctcccccccacttccctacccac
ccattcccattttttttggccctggcgttcccctgtactggggcatatac
agtttgcgtgtcccatgggcctctctttccagtgatggccgactaggcca
tcttttgatacatatgcagctagagtcaagagctccggggtactggttag
ttcataatgttgttccacctatagggttgcagatccctttagctccttgg
gtactttctctagctcctcaattgggagccctgtgatccatccaatagct
gactgtgagcatccacgtctgtgtttgctaggccccggcatagtctcaca
agagacagctacatctgggtcctttcaacaaaatcttgctagtgtatgcg
atggtgtcagcgtttggaagctgattatggggtggatccctggatatggc
agtctctagatggtccatcctttcgtctcagctccaaactttgtctctgt
actccttccatgggtgttttgttcc
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagagacaatgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaagga
gccgagggtgggcgtgtccatgctccggtagaatacttacaaattaaaga
gcttgccgagtcggtccgtaaatacggaaccaatgctaattttaccttgg
tgcagttagacaggctcgccggcatggcactaactcctgctgactggcaa
acggttgtaaaagccgctctccctagtatgggcaaatatatggaatggag
agctctttggcatgaaactgcacaagcgcaggcccgagcaaacgcagctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttattctgctgatcaaacaaactaccattggggagcttatgccca
agtttcctccacggctattagggcctggaaggcgctctcccgagcaggtg
aaaccactggtcaattaacaaaagttgtccagggacctcaggagtccttc
tcagattttgtggccagaatgacagaggcagcagagcgtatttttggaga
ttcagagcaagccgcgcctctggtagaacagctaatctatgagcaagcca
caaaggagtgccgagcggccatagccccaagaagaacaaaggcttacaga
ctggctcaggtctgtcgagagcttgggggacctctcaccatgcagctagc
ggccgcatcttcatctcagacgctcatggcagaatgatcagaggacatgt
tttaattgcgaagcctgggcatttaagaaagattgcagagctcgataaac
aggagggactctcactctttgctctagtgtgccaagtatctatagagctt
gacagtgtcgctctgtagaataagggcgatctcccacttgatgtccatca
gctatgtgcaaaaacggtcattcggcctaaatgtgtcaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25679214_25679706
seq2: B6Ng01-334N10.b_544_1047 (reverse)

seq1  TACAGAGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGAC  50
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TACAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGAC  50

seq1  TGCCATACCTGGGGATCCATCCCATAATCAGCCTCCAAACGTTGACACCA  100
      ||||||| |  |||||||| |||||||||||| |||||||| ||||||||
seq2  TGCCATATCCAGGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCA  100

seq1  TTGCATACACCTTTTCAGCAAGATTTTGCTGAAAGGACCCTGATATAGCT  150
      | ||||||||      |||||||||||| ||||||||||| ||| |||||
seq2  TCGCATACAC-----TAGCAAGATTTTGTTGAAAGGACCCAGATGTAGCT  145

seq1  GTCTCTTGTGAGACTATTCTTGGGCCTAGCAAACACAGAAGTGGATGCCC  200
      ||||||||||||||||| |  |||||||||||||||||| |||||||| |
seq2  GTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGACGTGGATGCTC  195

seq1  ATAGTCATTTATAGGATGGATCACAGGGCCCCTAACGGAGGAGCTAGAGA  250
      | |||||  ||| |||||||||||||||| || ||  |||||||||||||
seq2  ACAGTCAGCTATTGGATGGATCACAGGGCTCCCAATTGAGGAGCTAGAGA  245

seq1  AAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAT  295

seq1  TATGAACTAACCAGTACCCCCCAGAGCTCATGACTCTAGCTGCATATGTA  350
      ||||||||||||||||  |||| |||||| ||||||||||||||||||||
seq2  TATGAACTAACCAGTA--CCCCGGAGCTCTTGACTCTAGCTGCATATGTA  343

seq1  TCAGAAGATGGCCTAGTCAGCCATCAGTGGAAAGAGAGGCCCATTGGTCT  400
      ||| |||||||||||||| ||||||| ||||||||||||||||| || | 
seq2  TCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATGGGACA  393

seq1  TGCAAATTTTATATGCCTAAGTACAGGGGAATGCCAGGGCCAAGAA----  446
       ||||| | ||||||||  |||||||||||| ||||||||||| ||    
seq2  CGCAAACTGTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAAAAT  443

seq1  --------GTGAG------AGTGGGGGGAAGGGCATGGGGGACTTTTGGG  482
              ||| |      ||||||||| |||| ||||||||||||||||
seq2  GGGAATGGGTGGGTAGGGAAGTGGGGGGGAGGGTATGGGGGACTTTTGGG  493

seq1  ATAGCATTGGA  493
      |||||||||||
seq2  ATAGCATTGGA  504