BAC Information

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BAC

Clone NameB6Ng01-335J21
Chromosome7 (Build37)
Map Location 68,036,973 - 68,038,099
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664788, Snrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896
Downstream geneLOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943, B230209E15Rik, EG620934
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335J21.bB6Ng01-335J21.g
ACCGA120787GA120788
length1,0041,106
definitionB6Ng01-335J21.b B6Ng01-335J21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatctgcttcagaactactaagagctggcttcctgagctcat
ctagtgacgagtatctcctagagacctccgctaatcgatcttttttcttt
tcttttttcttttccttccttctaatctctccccaggtattcttacctga
cctaaacttttcctcgggttcaagacccttggaaaggcctgtatacttat
tttgtgtaccatattttctctttgttcctactctctctccccgctttact
tctgatagcttgtcctgaatttcatctagaatcctccctatcttaaccac
ttgataacatgtgaaaaggaacaaaagggctcctaacaccagaaaaaatt
caaggccaaacatattccactttacttctgatagactgtcttgaatttcg
ttagaaagttcaagatcaggcttacctcgtaaagctgtactcactggtac
tctcgttccccagctgaaaagttctgaattcatacagttgaatccttctt
aacagtctgctttacgggaacctttatcaccgtcgttccccagctgatga
gttctgaattcggcagttgaatccttctcaacagtctgtgttacgggaac
ctttataaacgtgatccgcagttctggttctgaaatgaagtatccctcct
gcgccggtgatggttaactccctcccgggtttttcttcccggtctttcgg
caccaattgttattagacgcgttctcacgaccggccaggaagaacaccac
agaccagaatcttctgcggcaaagctttattcttacatcttcaggagcag
agtgcaagaagcaagagagcaagaagcaagagagagagaaaagcaaaaga
gagagaaaacgaaaccccgtccctcttaaaggagcattctccttcgcctc
ggacgtgtcactccctgattggctgcagcccatcgggccgagttgacgtc
acggggaaggcagagcacaagtagtcataagatacctggcacatgcgcag
atta
gaattcattttgtttgaaggagatttatcatttttcccagccttttgact
ctaattctaagttagctaaaacttggaagctcctgttaatttgccaaagc
ccagagcctagtgttaggtaacccatatgtagtaacaaccagaaccaaat
tggatccaggactttatatttagccttggataattagggtatcatatatt
cttaatgctttttcttcttattaaacaacatcaaatactgccctgctttt
aaaatatattttaagttaaatattaattgtcttcattttgccttctttaa
tttcttctctaccatgttctggaaatttgcagttttgttttttcttttcc
ggtttctgtcatatagacaaaataatcttccactgtcaaactgatatagg
tatgaggcaacttattgacaaacttctgattagcttaatcatagcttgtg
gattggagaaaaatgattggatcaaatgaaacatttactattgctgcatt
tttgtttatcataatatatagatggataaaatagtaataattatttaagg
ttaatggaaatggataaaggaatcattttcagagcttcaagtataagcaa
tggaagcatacattaaatacagttatgacaactcaattcaatatggtcag
gagaataaaagaggttaaacactgtgaatctggagttggattacactgtt
cagaacacctagtgtgaatatcctttatccttgcttctcactggtaagaa
tgttatatggtatcttctattacttttctcttggtcttcactccattaaa
tcacacaccatttccaataggtccttaaccatatatagtatatataagag
acaaatacttctgaccgtcgactcttggtttatttagaataaccatctgc
ttttgatggattaactgtagtagtgggtaaagtactcgcttacatttgca
gttactatcatagatattacaaggtatcctgtctattgacactggatgca
tttcttaatttcatcatctgtactgaactttgatcttttttatgtgggaa
tttttttttttccagaacgggtttctcttgtatagtccttgctgtctgat
ctcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68036973_68038099
seq2: B6Ng01-335J21.g_67_1172 (reverse)

seq1  AGTGAGATCCAGGACAGCCAGGACTATAC-AGAGAAACCCTGTCTTGAAA  49
      |||||||||   |||||| |||||||||| ||||||||||  ||| |   
seq2  AGTGAGATC--AGACAGCAAGGACTATACAAGAGAAACCCGTTCTGG---  45

seq1  AAAAAAAAAAAAAAACACCAAAAAAAAAAAAAAAAAAAAACAAAGTACAA  99
          |||||||||||  ||        | | |||||| | |||||| | |
seq2  ----AAAAAAAAAAATTCC-------CACATAAAAAAGATCAAAGTTC-A  83

seq1  GTACAGAATTGATGAAAATTAAGAAATGGCATCCAGTGTCAATAGACAGG  149
      |||||||  ||||| |||||||||||| ||||||||||||||||||||||
seq2  GTACAGA--TGATG-AAATTAAGAAAT-GCATCCAGTGTCAATAGACAGG  129

seq1  ATACCTTGTAATATCTTATGATAGTAACTGCAAATGTAAGCGAGTACTTT  199
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATACCTTGTAATATC-TATGATAGTAACTGCAAATGTAAGCGAGTACTTT  178

seq1  ACCCACTACTACAGTTAATCCATCAAAAGCAGATGGTTATTCTAAATAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTACTACAGTTAATCCATCAAAAGCAGATGGTTATTCTAAATAAA  228

seq1  CCAAGAGTCGACGGTCAGAAGTATTTGTCTCTTATATATACTATATATGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGTCGACGGTCAGAAGTATTTGTCTCTTATATATACTATATATGG  278

seq1  TTAAGGACCTATTGGAAATGGTGTGTGATTTAATGGAGTGAAGACCAAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGACCTATTGGAAATGGTGTGTGATTTAATGGAGTGAAGACCAAGA  328

seq1  GAAAAGTAATAGAAGATACCATATAACATTCTTACCAGTGAGAAGCAAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTAATAGAAGATACCATATAACATTCTTACCAGTGAGAAGCAAGG  378

seq1  ATAAAGGATATTCACACTAGGTGTTCTGAACAGTGTAATCCAACTCCAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGATATTCACACTAGGTGTTCTGAACAGTGTAATCCAACTCCAGA  428

seq1  TTCACAGTGTTTAACCTCTTTTATTCTCCTGACCATATTGAATTGAGTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGTGTTTAACCTCTTTTATTCTCCTGACCATATTGAATTGAGTTG  478

seq1  TCATAACTGTATTTAATGTATGCTTCCATTGCTTATACTTGAAGCTCTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACTGTATTTAATGTATGCTTCCATTGCTTATACTTGAAGCTCTGA  528

seq1  AAATGATTCCTTTATCCATTTCCATTAACCTTAAATAATTATTACTATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTCCTTTATCCATTTCCATTAACCTTAAATAATTATTACTATTT  578

seq1  TATCCATCTATATATTATGATAAACAAAAATGCAGCAATAGTAAATGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATCTATATATTATGATAAACAAAAATGCAGCAATAGTAAATGTTT  628

seq1  CATTTGATCCAATCATTTTTCTCCAATCCACAAGCTATGATTAAGCTAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGATCCAATCATTTTTCTCCAATCCACAAGCTATGATTAAGCTAAT  678

seq1  CAGAAGTTTGTCAATAAGTTGCCTCATACCTATATCAGTTTGACAGTGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTTGTCAATAAGTTGCCTCATACCTATATCAGTTTGACAGTGGA  728

seq1  AGATTATTTTGTCTATATGACAGAAACCGGAAAAGAAAAAACAAAACTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTTTGTCTATATGACAGAAACCGGAAAAGAAAAAACAAAACTGC  778

seq1  AAATTTCCAGAACATGGTAGAGAAGAAATTAAAGAAGGCAAAATGAAGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCCAGAACATGGTAGAGAAGAAATTAAAGAAGGCAAAATGAAGAC  828

seq1  AATTAATATTTAACTTAAAATATATTTTAAAAGCAGGGCAGTATTTGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATATTTAACTTAAAATATATTTTAAAAGCAGGGCAGTATTTGATG  878

seq1  TTGTTTAATAAGAAGAAAAAGCATTAAGAATATATGATACCCTAATTATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAATAAGAAGAAAAAGCATTAAGAATATATGATACCCTAATTATC  928

seq1  CAAGGCTAAATATAAAGTCCTGGATCCAATTTGGTTCTGGTTGTTACTAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTAAATATAAAGTCCTGGATCCAATTTGGTTCTGGTTGTTACTAC  978

seq1  ATATGGGTTACCTAACACTAGGCTCTGGGCTTTGGCAAATTAACAGGAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGTTACCTAACACTAGGCTCTGGGCTTTGGCAAATTAACAGGAGC  1028

seq1  TTCCAAGTTTTAGCTAACTTAGAATTAGAGTCAAAAGGCTGGGAAAAATG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGTTTTAGCTAACTTAGAATTAGAGTCAAAAGGCTGGGAAAAATG  1078

seq1  ATAAATCTCCTTCAAACAAAATGAATTC  1127
      ||||||||||||||||||||||||||||
seq2  ATAAATCTCCTTCAAACAAAATGAATTC  1106