BAC Information

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BAC

Clone NameB6Ng01-335L04
Chromosome7 (Build37)
Map Location 36,911,294 - 36,912,362
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc7a10, Wdr88, Gpatch1, Rhpn2, C230052I12Rik, Ccdc123, Slc7a9, 2410004F06Rik, Nudt19, Rgs9bp, Ankrd27, Pdcd5, Dpy19l3, zfp507, LOC100043872
Downstream geneEG668988, LOC668507, Tshz3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335L04.bB6Ng01-335L04.g
ACCGA120841GA120842
length1,0721,093
definitionB6Ng01-335L04.b B6Ng01-335L04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctatgtagcccagacttttcatgaactctcaaggatcttcctg
ctttaggttcccatgtgctggagtcacaggcatgcaccataccattcagc
tgcaaaggtcactttttaagcaatctatacctttgaatttttcccccctc
tgtcttaaaattgttttctatgcaccaggcattcaaagaatgggggctgg
ttgtgtgggtcagaccagctgattgtgttcagatgaccagggtcttcctg
agacattgctttgagctcagctgcaatccagtgggtatgcctgtcatgaa
aacagctaaaggagagcttcatgagatatgtttgaaaagacagctgctga
cgatagagtgtcgtacaaagatgataggataaagcccctctggccaggga
tagttaagagtgtgcagagggcccaaatatggttcccacaaaaattgcct
gaactccagctccagggcacactgcgccttctttggtctctgaagttgtc
tgtactcacatacacatacctatatccagacacacaatagatggaatcta
acaacaacaacaacaacaacaacaaaacctaaacttctgtaccctggtct
cgctttcttatttgggacaaagtgaacactaccccaattcccaggtggca
gagagccctttgtgggtgatgggacaagggactttccctagcccttcctg
gctcataggtctcaactctggtctggtgttcacagagtgtagcagtggct
gcctcagaggagggaggagataaactttcgaagaataaacttaagatatt
tgtaaaacatccccaggcttatggtttgaagtggaggaagcgatacaggt
ccttcaaggtctcagactcttttcagtctcagaccatcatggacagccat
gcacaggtgtccctgcagagcccgagggagactgattcagcaacttcaca
gaagtctactttagatgcctcagttcctccctctgagtcaagttcacatc
ttgccaccaggaccaaagctggattgcagttgtgtgggtcctgttctgca
tagtcacaatgctctgctgact
gaattccttgcttactcagtagctcctgaaacacagtgtgtggtggctgt
cctgtggattaatgcagagatgggttggtgaatgtaagcagctcggctcc
aattttcaatgtgaatagacgggccactgattgcatccggtggaaaaaaa
agacagcattttcaacaaatggtgctggctcaactggtggttagcatgta
gaagaaagcaaattgatcctttcttatctccttgtacaaagctcacgtcc
aagtagatcaaggacctttacataaaaccagatacacagtaactaataga
agagaaagtggggaagagccttgagcataggggcaaaaggggaaaattcc
tgaacagagaacactaatggcttgtgatgtaagagcaagaatcgacaaat
gggacctcataaaattgcaaagcttctgtaaggcaaaggacactgtcaat
aagacaaaacagcaaccaacagtttggggaaagatctttaccaatcctat
atccaatagagggctaatatcctgtcaataagacaaaacagcaaccaaca
gtttggggaaagatctttaccaatcctatatccaatagagggctaatatc
ccgtatatacaaagaactcaagaagttagactccagagaaacaaataacc
ctattaaaagtgggatacagagcttaacaaaaaattctcaactgaggaat
atcgaatgtctgagaagcacctgaaaaaaatgttcaacatccttaatcat
cagggaaatgcaaatcaaaacaaccctgagattccacctcacaccagtca
gaatggctaagataaaaaattcaggtgacagcagatgctggggaggatgt
ggagacagaggaacactcctccattgttggtgggatagcaagctggtaca
accacttctggaaatcagtctggagtttcttcagaaattgggcataagta
ctaccggagatccagctatacccctcctgggcatataccagaagatgttc
aacttgtataggaaccaatgctcacatgtggacatcatgggggtggacag
ccttgtctatgagcctctatgcccagtgtgggagtgggttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_36911294_36912362
seq2: B6Ng01-335L04.b_46_1117

seq1  GAATTCTCTATGTAGCCCAGACTTTTCATGAACTCTCAAGGATCTTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATGTAGCCCAGACTTTTCATGAACTCTCAAGGATCTTCCTG  50

seq1  CTTTAGGTTCCCATGTGCTGGAGTCACAGGCATGCACCATACCATTCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGTTCCCATGTGCTGGAGTCACAGGCATGCACCATACCATTCAGC  100

seq1  TGCAAAGGTCACTTTTTAAGCAATCTATACCTTTGAATTTTTCCCCCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGGTCACTTTTTAAGCAATCTATACCTTTGAATTTTTCCCCCCTC  150

seq1  TGTCTTAAAATTGTTTTCTATGCACCAGGCATTCAAAGAATGGGGGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTAAAATTGTTTTCTATGCACCAGGCATTCAAAGAATGGGGGCTGG  200

seq1  TTGTGTGGGTCAGACCAGCTGATTGTGTTCAGATGACCAGGGTCTTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGGGTCAGACCAGCTGATTGTGTTCAGATGACCAGGGTCTTCCTG  250

seq1  AGACATTGCTTTGAGCTCAGCTGCAATCCAGTGGGTATGCCTGTCATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTGCTTTGAGCTCAGCTGCAATCCAGTGGGTATGCCTGTCATGAA  300

seq1  AACAGCTAAAGGAGAGCTTCATGAGATATGTTTGAAAAGACAGCTGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTAAAGGAGAGCTTCATGAGATATGTTTGAAAAGACAGCTGCTGA  350

seq1  CGATAGAGTGTCGTACAAAGATGATAGGATAAAGCCCCTCTGGCCAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATAGAGTGTCGTACAAAGATGATAGGATAAAGCCCCTCTGGCCAGGGA  400

seq1  TAGTTAAGAGTGTGCAGAGGGCCCAAATATGGTTCCCACAAAAATTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGAGTGTGCAGAGGGCCCAAATATGGTTCCCACAAAAATTGCCT  450

seq1  GAACTCCAGCTCCAGGGCACACTGCGCCTTCTTTGGTCTCTGAAGTTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCAGCTCCAGGGCACACTGCGCCTTCTTTGGTCTCTGAAGTTGTC  500

seq1  TGTACTCACATACACATACCTATATCCAGACACACAATAGATGGAATCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCACATACACATACCTATATCCAGACACACAATAGATGGAATCTA  550

seq1  ACAACAACAACAACAACAACAACAAAACCTAAACTTCTGTACCCTGGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAACAACAACAACAACAAAACCTAAACTTCTGTACCCTGGTCT  600

seq1  CGCTTTCTTATTTGGGACAAAGTGAACACTACCCCAATTCCCAGGTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTCTTATTTGGGACAAAGTGAACACTACCCCAATTCCCAGGTGGCA  650

seq1  GAGAGCCCTTTGTGGGTGATGGGACAAGGGACTTTCCCTAGCCCTTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCCCTTTGTGGGTGATGGGACAAGGGACTTTCCCTAGCCCTTCCTG  700

seq1  GCTCATAGGTCTCAACTCTGGTCTGGTGTTCACAGAGTGTAGCAGTGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATAGGTCTCAACTCTGGTCTGGTGTTCACAGAGTGTAGCAGTGGCT  750

seq1  GCCTCAGAGGAGGGAGGAGATAAACTTTCGAAGAATAAACTTAAGATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGAGGAGGGAGGAGATAAACTTTCGAAGAATAAACTTAAGATATT  800

seq1  TGTAAAACATCCCCAGGCTTATGGTTTGAAGTGGAGGAAGCGATACAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAACATCCCCAGGCTTATGGTTTGAAGTGGAGGAAGCGATACAGGT  850

seq1  CCTTCAAGGTCTCAGACTC-TTTCAGTCTCAGACCATCATGGACAGCCAT  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTTCAAGGTCTCAGACTCTTTTCAGTCTCAGACCATCATGGACAGCCAT  900

seq1  GCACAGGTGT-CCTGCAGAGCCCGAGGGAGACTGATTCAGCAACTTCACA  948
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGTGTCCCTGCAGAGCCCGAGGGAGACTGATTCAGCAACTTCACA  950

seq1  GAAGTCTACTTAGGATGCCTCAG-TCCT-CCTCTGAGGTCAAGTTTCACA  996
      |||||||||||  |||||||||| |||| ||||||| |||||| ||||||
seq2  GAAGTCTACTTTAGATGCCTCAGTTCCTCCCTCTGA-GTCAAG-TTCACA  998

seq1  TCTTGC--ACAGGACCCAAAGCTGGATGGCAG-TGTGTTGGTCCTGTCCT  1043
      ||||||   ||||| |||||||||||| |||| ||||| |||||||| ||
seq2  TCTTGCCACCAGGA-CCAAAGCTGGATTGCAGTTGTGTGGGTCCTGTTCT  1047

seq1  GCATAAGTCACAATGCTCTGCTGACT  1069
      |||| |||||||||||||||||||||
seq2  GCAT-AGTCACAATGCTCTGCTGACT  1072