BAC Information

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BAC

Clone NameB6Ng01-336B21
Chromosome7 (Build37)
Map Location 70,587,765 - 70,588,898
singlet/doubletsinglet
Overlap genenone
Upstream genePeg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251, Chrna7
Downstream geneOtud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336B21.bB6Ng01-336B21.g
ACCGA121143GA121144
length1,0731,136
definitionB6Ng01-336B21.b B6Ng01-336B21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacaaagagattgaagaaaaaaatctcagaaaaaatcagagaaa
gacaagtagaaagaatgaagcagaggacagactatcaggacttgaagata
aagtaaacaatctggaccaaactggcaaagaatgcaaaaacacaggaaag
gaatgtgaaggaaatgagggattccatccgatgatcaaacctttaaatta
caggcatagatgaggaagaagtacccctagctaatgacatacatcagatc
ttcaagaagattatatacaagaagcaaatagaaccccaactagatgagac
cagaaaaaaaaacctccaaaaagaagaaaagaaaaaaacctcctcacagc
ataccatagtcaaacatctaactatacagaacaaagaaaaaaaaccttga
agactgacagagaaaaaaaccaaatcacgtataaaggaaagttcatcaga
atattagctaatttctgattggaaactccaatagccagaaaaacctggag
taatgtactctaagttccaaaagaccacaactgtcaacctaaactactat
gtccagtaaaaccatgtgccatagttggaggagaaagaaacacaatccag
gtgtgaagaaaaaaaaatccaccactaccaccaccaccaccaccaccacc
actaccaccaccaccaccaccaccaccaccaccaccaccaccaccaccag
atacccactaagcagaattattgggagcaatacttagaaccaaagagagg
aaaaagcataaccaagagactctagaaagaaaacagaagtggatgctcac
agtcaactattggatggatcacagggcccccaatggaggagctagagaaa
gtatccaaggagctaaacagatctgcaaccctatcggtggaacaacatta
taaactaaccagtaccccagagctcttgactctagctgcatatgtatcaa
agatgacctagtcggccatcactgggaaagagaggccattggtcaggcaa
ctttatatgcccagtacaggggaaccaccagggccaaaaaatgggatggg
tgggttaggggggagttgggggc
gaattctataaggcagatgtctgatctgtggttgtggagagctaacacat
tgcaggataggacctaaatttatcttgaactattagtgccctaaataacc
atttattctgtaaaattgacctaaattttatgtggtcattgagcaggtcc
ctttatgttgacaagtctgggaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaacccaaaactattctccagagagaagccgacttggaaccc
tggacaatacaacttgacagtacaaacctgggctttcccagtgcccttac
ctaggggatatctatcctctccctgactcttcctcttctcaataagtatg
cagtttatgtcttcaaaacccaacaacttcaattccaaatggccttcctc
caacagtgccaccaggattgacggaacaggcaaagggagtgctcagtttg
acttgtagcatgagaaattttctgagcattcaccaatggagatccaggag
atataacagccttaggaacagaacaggaaagaggattttgccttattcag
ctttagtccccttctcaacacaaagcagttcaaatactgatcttgataaa
ttatggagaaaagtgtctcagagaagttgagaaagttatgcataaagcac
agcttagcaatctggaactttagttatacacacctctcctaacgatgcac
tagcaacccgttggcaaccttgaatatccatttgcaccgaattgtatcta
cacccccactcgaaacagtgggaataggtttttccttcctgtaaagactg
ttagacatcgaacagtttctattcagtttagattccagctattataagga
atgggaatcctaatccagtttgaactagtcttggtgtgtataatgcaata
aggaaagatggtgctctgagtgaacttttagggaagaacaacacatttaa
ccatcctatgactatggcaaagttgggtgtgcatatgattaaaataaaac
acatttataggaatggacgtgcaatagtgacaaattggcttacatatctg
ctcttgtcattcaaacaaggaacactgacgctacatcttagcactaatgt
ctctttctgaagacatagaatgactctcaaataata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70587765_70588898
seq2: B6Ng01-336B21.g_66_1201

seq1  GAATTCTATAAGGCAGATGTCTGATCTGTGGTTGTGGAGAGCTAACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAAGGCAGATGTCTGATCTGTGGTTGTGGAGAGCTAACACAT  50

seq1  TGCAGGATAGGACCTAAATTTATCTTGAACTATTAGTGCCCTAAATAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGATAGGACCTAAATTTATCTTGAACTATTAGTGCCCTAAATAACC  100

seq1  ATTTATTCTGTAAAATTGACCTAAATTTTATGTGGTCATTGAGCAGGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCTGTAAAATTGACCTAAATTTTATGTGGTCATTGAGCAGGTCC  150

seq1  CTTTATGTTGACAAGTCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA  200
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTTATGTTGACAAGTCT-GGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA  199

seq1  AAAAAAAAAAAAACCAAAACTATTCTCCAGAGAGAAGCCGACTTGGAACC  250
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAACCCAAAACTATTCTCCAGAGAGAAGCCGACTTGGAACC  249

seq1  CTGGACAATACAACTTGACAGTACAGACCTGGGCTTTCCCAGTGCCCTTA  300
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGGACAATACAACTTGACAGTACAAACCTGGGCTTTCCCAGTGCCCTTA  299

seq1  CCTAGTGGATATCTATCCTCTCCCTGACTCTTCCTCTTCTCAATAAGTAT  350
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGGATATCTATCCTCTCCCTGACTCTTCCTCTTCTCAATAAGTAT  349

seq1  GCAGTTTATGTCTTCAGAACCCAACAACTTCAATTCCAAATGGCCTTCCT  400
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GCAGTTTATGTCTTCAAAACCCAACAACTTCAATTCCAAATGGCCTTCCT  399

seq1  CCAACAGTGCCACCAGGATTGACGGAACAGGCAAAGGGAGTGCTCAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGTGCCACCAGGATTGACGGAACAGGCAAAGGGAGTGCTCAGTTT  449

seq1  GACTTGTAGCATGAGAAATTTTCTGAGCATTCACCAATGGAGATCCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTAGCATGAGAAATTTTCTGAGCATTCACCAATGGAGATCCAGGA  499

seq1  GATATAACAGCCTTAGGAACAGAACAGGAAAGAGGATTTTGCCTTATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAACAGCCTTAGGAACAGAACAGGAAAGAGGATTTTGCCTTATTCA  549

seq1  GCTTTAGTCCCCTTCTCAACACAAAGCAGTTCAAATACTGATCTTGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTCCCCTTCTCAACACAAAGCAGTTCAAATACTGATCTTGATAA  599

seq1  ATTATGGAGAAAAGTGTCTCAGAGAAGTTGAGAAAGTTATGCATAAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGAGAAAAGTGTCTCAGAGAAGTTGAGAAAGTTATGCATAAAGCA  649

seq1  CAGCTTAGCAATCTGGAACTTTAGTTATACACACCTCTCCTAACGATGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTAGCAATCTGGAACTTTAGTTATACACACCTCTCCTAACGATGCA  699

seq1  CTAGCAACCCGTTGGCAACCTTGAATATCCATTTGCACCGAATTGTATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAACCCGTTGGCAACCTTGAATATCCATTTGCACCGAATTGTATCT  749

seq1  ACA-CCCCACTCGAAACAGT-GGAATAGGTTTTTCCTTCCTGTAAAGACT  798
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACACCCCCACTCGAAACAGTGGGAATAGGTTTTTCCTTCCTGTAAAGACT  799

seq1  GTTAGACATCG-ACAGTTTCTATTCAG-TTAGATTCCAGCTA-TATAA-G  844
      ||||||||||| ||||||||||||||| |||||||||||||| ||||| |
seq2  GTTAGACATCGAACAGTTTCTATTCAGTTTAGATTCCAGCTATTATAAGG  849

seq1  AAT-GGAATCCTAATCCAGTTTGAACTAGTCTT-GTGTGTAT-ATGCAAT  891
      ||| ||||||||||||||||||||||||||||| |||||||| |||||||
seq2  AATGGGAATCCTAATCCAGTTTGAACTAGTCTTGGTGTGTATAATGCAAT  899

seq1  AAGGAAAGAT-GTGCTCTGAGTGAACTTTTA-GGAAGAACACACCATTTA  939
      |||||||||| |||||||||||||||||||| |||||||||   ||||||
seq2  AAGGAAAGATGGTGCTCTGAGTGAACTTTTAGGGAAGAACAACACATTTA  949

seq1  ACCATCCTATGACTAT-GCAAAGTTGGGTGTGCATATGATTAAAATAAAA  988
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACCATCCTATGACTATGGCAAAGTTGGGTGTGCATATGATTAAAATAAAA  999

seq1  CACA-TTATAGGAAAGGACGTGC-ATAGTGACAAA-TGGCTTACATAATC  1035
      |||| ||||||||| |||||||| ||||||||||| |||||||||| |||
seq2  CACATTTATAGGAATGGACGTGCAATAGTGACAAATTGGCTTACAT-ATC  1048

seq1  TGCTC-TGTCAATCAAAACAGAGAACCACTGACGCTACATCCTTTAGCAA  1084
      ||||| ||||| || ||||| || | |||||||||||||||  ||||| |
seq2  TGCTCTTGTCATTC-AAACA-AGGAACACTGACGCTACATC--TTAGC-A  1093

seq1  CTAAATGTCTCCTTTTCTGGAAGACCATAGAATGAACCCTC-CAAATAAT  1133
      || ||||||||  ||||| ||||| ||||||||||   ||| ||||||||
seq2  CT-AATGTCTC--TTTCT-GAAGA-CATAGAATGA---CTCTCAAATAAT  1135

seq1  A  1134
      |
seq2  A  1136