BAC Information

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BAC

Clone NameB6Ng01-336E13
Chromosome7 (Build37)
Map Location 69,559,169 - 69,560,292
singlet/doubletsinglet
Overlap genenone
Upstream geneB230209E15Rik, EG620934, LOC100041293, Ndn, Magel2
Downstream geneMkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251, Chrna7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336E13.bB6Ng01-336E13.g
ACCGA121249GA121250
length1,2341,117
definitionB6Ng01-336E13.b B6Ng01-336E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aactagatcttctttgcaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttgggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttgtgagtctagctaagggtttatctat
cttgttgattttctcaaagaaccaactcctcgtttggttaattctttgaa
tagttcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgccatctattcctcttgggtgaatttgcttcctttttttctagggc
ttttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttcttct
tcgaggcactcagagctatgagtttccctcttagaaatgctttcattgtg
gtcccataggtttgggtacgttgtggcttcattttcttaaacttctaaaa
gtcttattctttctttattccttccttggacaagttcattgagaagagtg
ttatttcaggttccacgggatgtggcctttcattatttagttgtgtattg
agatacagacttgaaacatgggggctcgatagaacatgcaattcaatttg
tatccatgaggccgttttgtgtaccacatttagt

gaattctaagaaaaatactgctaaactatttccttgatttttattagacc
agagaggtcacttttcagttgtcttctggttaaacaatgcatccttaaca
tacatgtaataaaatgttgcaaagtcttctactgtatgctatgttgtgtt
gtttctctttgttccttttactgataaagatgagtgtatatattttataa
aatgttttgatgtaacctgtgtatttaatccgttatttttctctcatttt
attactgctttcatctactcattttccttacttagcccacttaacaaaac
tcagaagacaaaggagagatgcacacgtatatttacatatatcacctaac
tatattacatgtactttatattaccaaactgattaagaatctttagatac
aggaagatatttgttatccttttgatagaagaaaatatccttattttatc
ttctttatttttctagaacacagccccatcctgccttttaattcaaatat
gctattatctcattcagttttgtaccaatatccattgatattcatgtgga
aacaagttctactaaacttaaatctgaattaaagtgaccgtttcactgtt
atcccattagatgggaaattatttttgatcagcatttcatcaatgctgca
tgtatttacgtatgcaaaagttttaacatggtaattgtttcttgccacta
gtactggcttatttcccaaaaacaccctttctcacttatattccaatgcc
atccagttgcaatttggagtgagctatgttagcagaaatctcagtgctaa
gatatacaaaggtgaaaagagaaatgaataaaggcactgactgagaagtg
gttacatttctctttgtgtccatgatattttgtccatggaatcagtgata
tgacctgtgagaaacagtggtttctgtatcttttctgaatgataactaag
taaattttccactaccatgtttatccatatacatctaccaaatttacaat
tggaaagcataggaattaatgtgtttcataagttcttttatgttgcagct
caacagtcttttatggagctgcagctcttttgaggtgggggcctgctgct
ctgaagcccacaagcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_69559169_69560292
seq2: B6Ng01-336E13.g_68_1184

seq1  GAATTCTAAGAAAAATACTGCTAAACTATTTCCTTGATTTTTATTAGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGAAAAATACTGCTAAACTATTTCCTTGATTTTTATTAGACC  50

seq1  AGAGAGGTCACTTTTCAGTTGTCTTCTGGTTAAACAATGCATCCTTAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTCACTTTTCAGTTGTCTTCTGGTTAAACAATGCATCCTTAACA  100

seq1  TACATGTAATAAAATGTTGCAAAGTCTTCTACTGTATGCTATGTTGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTAATAAAATGTTGCAAAGTCTTCTACTGTATGCTATGTTGTGTT  150

seq1  GTTTCTCTTTGTTCCTTTTACTGATAAAGATGAGTGTATATATTTTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTTTGTTCCTTTTACTGATAAAGATGAGTGTATATATTTTATAA  200

seq1  AATGTTTTGATGTAACCTGTGTATTTAATCCGTTATTTTTCTCTCATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTGATGTAACCTGTGTATTTAATCCGTTATTTTTCTCTCATTTT  250

seq1  ATTACTGCTTTCATCTACTCATTTTCCTTACTTAGCCCACTTAACAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGCTTTCATCTACTCATTTTCCTTACTTAGCCCACTTAACAAAAC  300

seq1  TCAGAAGACAAAGGAGAGATGCACACGTATATTTACATATATCACCTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGACAAAGGAGAGATGCACACGTATATTTACATATATCACCTAAC  350

seq1  TATATTACATGTACTTTATATTACCAAACTGATTAAGAATCTTTAGATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTACATGTACTTTATATTACCAAACTGATTAAGAATCTTTAGATAC  400

seq1  AGGAAGATATTTGTTATCCTTTTGATAGAAGAAAATATCCTTATTTTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATATTTGTTATCCTTTTGATAGAAGAAAATATCCTTATTTTATC  450

seq1  TTCTTTATTTTTCTAGAACACAGCCCCATCCTGCCTTTTAATTCAAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTTTTCTAGAACACAGCCCCATCCTGCCTTTTAATTCAAATAT  500

seq1  GCTATTATCTCATTCAGTTTTGTACCAATATCCATTGATATTCATGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTATCTCATTCAGTTTTGTACCAATATCCATTGATATTCATGTGGA  550

seq1  AACAAGTTCTACTAAACTTAAATCTGAATTAAAGTGACCGTTTCACTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTTCTACTAAACTTAAATCTGAATTAAAGTGACCGTTTCACTGTT  600

seq1  ATCCCATTAGATGGGAAATTATTTTTGATCAGCATTTCATCAATGCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATTAGATGGGAAATTATTTTTGATCAGCATTTCATCAATGCTGCA  650

seq1  TGTATTTACGTATGCAAAAGTTTTAACATGGTAATTGTTTCTTGCCACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTACGTATGCAAAAGTTTTAACATGGTAATTGTTTCTTGCCACTA  700

seq1  GTACTGGCTTATTTCCCAAAAACACCCTTTCTCACTTATATTCCAATGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGCTTATTTCCCAAAAACACCCTTTCTCACTTATATTCCAATGCC  750

seq1  ATCCAGTTGCAATTTGGAGTGAGCTATGTTAGCAGAAATCTCAGTGCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTTGCAATTTGGAGTGAGCTATGTTAGCAGAAATCTCAGTGCTAA  800

seq1  GATATACAAAGGTGAAAAGAGAAATGAATAAAGGCACTGACTGAGAAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACAAAGGTGAAAAGAGAAATGAATAAAGGCACTGACTGAGAAGTG  850

seq1  GTTACATTTCTCTTTGTGTCCATGATATTTTGTCCATGGAATCAGTGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATTTCTCTTTGTGTCCATGATATTTTGTCCATGGAATCAGTGATA  900

seq1  TGACCTGTGAGAAACAGTGGTTTCTGTATCTTTTCTGAATGATAACTAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGTGAGAAACAGTGGTTTCTGTATCTTTTCTGAATGATAACTAAG  950

seq1  TAAA-TTTCCACTACCATGTTTATCCATATACATCTACCAAATTTACAAT  999
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTCCACTACCATGTTTATCCATATACATCTACCAAATTTACAAT  1000

seq1  TGGAAAGCATAGGAAATTAAATGTGTTTCATAAGGTTCTTTATGTTGCAG  1049
      |||||||||||||||  | ||||||||||||||| |  ||||||||||||
seq2  TGGAAAGCATAGGAA--TTAATGTGTTTCATAAGTTCTTTTATGTTGCAG  1048

seq1  CTCAACAGTTCTTTTATGGAGCCTGCAAGCTCTTTTGAGGTGGGGGCTGC  1099
      |||||||| |||||||||||| |||| ||||||||||||||||||||   
seq2  CTCAACAG-TCTTTTATGGAG-CTGC-AGCTCTTTTGAGGTGGGGGCCTG  1095

seq1  CTGCTCTGAAGCCTTCACAAAGCAA  1124
      |||||||||||||  ||| ||||||
seq2  CTGCTCTGAAGCC--CAC-AAGCAA  1117


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