BAC Information

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BAC

Clone NameB6Ng01-336G05
Chromosome7 (Build37)
Map Location 61,923,692 - 62,068,199
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668789, Mrps33p, LOC622146
Downstream geneLuzp2, LOC668796, Siglech, Tubgcp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336G05.bB6Ng01-336G05.g
ACCGA121325GA121326
length1,1101,007
definitionB6Ng01-336G05.b B6Ng01-336G05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,923,692 - 61,924,810)(62,067,621 - 62,068,199)
sequence
gaattctataaaaaccctgctttcagttcatttccctgctgcctctcacc
aaagcagaggcagccaccctcctggaatttatcatcccattaaaggtttg
tgtgaggtttgttgtgtgctctgattatttggtattccttggctaacact
gccaggatacttctctgagtagaattgtaagaagtcatagatgatttttt
gctggagaaacccccccccctcctggagcagagctataacacttctgtag
aagaagactttccatttttaactataacatgtatacacaaagatacacaa
ttgctgatactgacctgaattaagatcgagccagccaaacttcacaatgg
atgagaaaaggataatgaaggcccacacctacctgaaaaacaattttgaa
ttaatggcagagtcaatttcctttagggatgcactcctgagaagctaccc
atctccaggagatgatctcacacccatgcacaaacttgcaacactgattg
aatgatctcaaagagtgagaaaggggatgagaactacagagagatagaca
gagggaggaagagaaggggaggaacagggaagcgggagagggagataaag
agcaggaagtcaggaggaacaaacaatagacaggatattggagaaattag
atagagtggaatggggtatgtttttgatccaaacacgttataggcacaca
tgactgttaaaatatttccaatgaaatcccgaagttgcaaatataaatgt
actactctccaatgcacaatttattctcttcattaaacactttctcaggt
aattaaaaattcctagaagatacaaactagtatttgacttagattctccc
aaaaacaatctagaaagtcataagaggaaagcaaagcagtcattacagga
aggttgcctagcaacaagctccacctaccatggtgaacccctttgagtgt
ctcactgctaagactcccagtctgtgggtcaattataagacaggagatga
gacagaagtgaagatgtagaaaaaatgtccacggagtaaatataattcag
aatggctgtaagcaaaccatcatcacacctctgtttaacatttctttctg
cagacatggg

gaattcaatattatattaagctaatgcatcttttgtggtcacaatattac
aatatttgaaaattaattaatcactgacagaacacaaacataaaaaatta
aacagaacatcaacaaggttttgaagaagaaataaatagcatattaaaaa
agaacctggatcaaatacagtaatacaacaaaatacaacaaaaacaataa
cacaacaaaattctaggatgtagaaaatctgaataaaagaataaaattta
gaccaataagtatatattagaacaaaaataaaaattggaaactaaataac
tttatttcagaccaaagaggagtagaaaaaaaagagaaagagagaactag
tttaaaacatagcagtggaatgaatataatctagaataaaaatcagtgaa
ataaaaagcagaaggaacatgagaagagatgatgaggcaagtgtgaagag
gtaattaagtgaaccacaggatatacaacactaacccatcccaaagacca
agtactcaataaacaaacttattaacataaaatatggtattacacttaat
atggcagatctaaagaatcctgtgagactaccatgaataatcccatgtca
acaaattgaataatttgttagaaataggtgatttcctagaatgtacaacc
tagtaaatcaaacagaaataaactacacaaacagaccaataatgatgagg
gttattgagttgttaattactttcctttcaatagagaaaaccacaggatt
atacaaatggttttctggatgaattcctttaatattaaaaaaaaaattaa
tgacaagtcttcttggcgcttttgttgaatagcaggaaatgccaccaaac
ctgtcttacgaggctggcattatcccaatatcaaagccagtaacaacaat
accattttagggcaatatctttgaaaagcatagatgaataaactctcaat
aagtgctgccatgcaaagtatctcatgtgttgagaaagtgcacagaatat
ctgtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61923692_61924810
seq2: B6Ng01-336G05.b_49_1158

seq1  GAATTCTATAAAAACCCTGCTTTCAGTTCATTTCCCTGCTGCCTCTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAAAAACCCTGCTTTCAGTTCATTTCCCTGCTGCCTCTCACC  50

seq1  AAAGCAGAGGCAGCCACCCTCCTGGAATTTATCATCCCATTAAAGGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAGGCAGCCACCCTCCTGGAATTTATCATCCCATTAAAGGTTTG  100

seq1  TGTGAGGTTTGTTGTGTGCTCTGATTATTTGGTATTCCTTGGCTAACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGTTTGTTGTGTGCTCTGATTATTTGGTATTCCTTGGCTAACACT  150

seq1  GCCAGGATACTTCTCTGAGTAGAATTGTAAGAAGTCATAGATGATTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGATACTTCTCTGAGTAGAATTGTAAGAAGTCATAGATGATTTTTT  200

seq1  GCTGGAGAAACCCCCCCCCCTCCTGGAGCAGAGCTATAACACTTCTGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAAACCCCCCCCCCTCCTGGAGCAGAGCTATAACACTTCTGTAG  250

seq1  AAGAAGACTTTCCATTTTTAACTATAACATGTATACACAAAGATACACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACTTTCCATTTTTAACTATAACATGTATACACAAAGATACACAA  300

seq1  TTGCTGATACTGACCTGAATTAAGATCGAGCCAGCCAAACTTCACAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATACTGACCTGAATTAAGATCGAGCCAGCCAAACTTCACAATGG  350

seq1  ATGAGAAAAGGATAATGAAGGCCCACACCTACCTGAAAAACAATTTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAAAGGATAATGAAGGCCCACACCTACCTGAAAAACAATTTTGAA  400

seq1  TTAATGGCAGAGTCAATTTCCTTTAGGGATGCACTCCTGAGAAGCTACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGCAGAGTCAATTTCCTTTAGGGATGCACTCCTGAGAAGCTACCC  450

seq1  ATCTCCAGGAGATGATCTCACACCCATGCACAAACTTGCAACACTGATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAGGAGATGATCTCACACCCATGCACAAACTTGCAACACTGATTG  500

seq1  AATGATCTCAAAGAGTGAGAAAGGGGATGAGAACTACAGAGAGATAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCTCAAAGAGTGAGAAAGGGGATGAGAACTACAGAGAGATAGACA  550

seq1  GAGGGAGGAAGAGAAGGGGAGGAACAGGGAAGCGGGAGAGGGAGATAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGAAGAGAAGGGGAGGAACAGGGAAGCGGGAGAGGGAGATAAAG  600

seq1  AGCAGGAAGTCAGGAGGAACAAACAATAGACAGGATATTGGAGAAATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAAGTCAGGAGGAACAAACAATAGACAGGATATTGGAGAAATTAG  650

seq1  ATAGAGTGGAATGGGGTATGTTTTTGATCCAAACACGTTATAGGCACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTGGAATGGGGTATGTTTTTGATCCAAACACGTTATAGGCACACA  700

seq1  TGACTGTTAAAATATTTCCAATGAAATCCCGAAGTTGCAAATATAAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTAAAATATTTCCAATGAAATCCCGAAGTTGCAAATATAAATGT  750

seq1  ACTACTCTCCAATGCACAATTTATTCTCTTCATTAAACACTTTCTCAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTCTCCAATGCACAATTTATTCTCTTCATTAAACACTTTCTCAGGT  800

seq1  AATTAAAAATTCCTAGAAGATACAAACTAGTATTTGACTTAGATTCTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAATTCCTAGAAGATACAAACTAGTATTTGACTTAGATTCTCCC  850

seq1  AAAAACAATCTAGAAAGTCATAAGAGGAAAGCAAAGCAGTCATTACAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAATCTAGAAAGTCATAAGAGGAAAGCAAAGCAGTCATTACAGGA  900

seq1  AGGTTGCCTAGCAACAAGCTCCACCTACCATGGTGAACCCCTTTGAGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGCCTAGCAACAAGCTCCACCTACCATGGTGAACCCCTTTGAGTGT  950

seq1  CTCACTGCTAAGAACTCCCAGTCTGTGGGTCAATTATAAAGACAGGAGAT  1000
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  CTCACTGCTAAG-ACTCCCAGTCTGTGGGTCAATTAT-AAGACAGGAGAT  998

seq1  GAAGACAGAAGTGAAGATGTTAGAAAAATGTCCACGGAGTAAAATAATAT  1050
      | ||||||||||||||||||   ||||||||||||||||| |||||  ||
seq2  G-AGACAGAAGTGAAGATGTAGAAAAAATGTCCACGGAGT-AAATATAAT  1046

seq1  TCAGA--TGCTGTAAAGCAAAACCATCATCAACACCTCTGTTTATACATT  1098
      |||||   ||||| |||| ||||||||||| ||||||||||||| |||||
seq2  TCAGAATGGCTGT-AAGC-AAACCATCATC-ACACCTCTGTTTA-ACATT  1092

seq1  TCTTTCCTGCAGGAACATGGG  1119
      ||||| ||||||  |||||||
seq2  TCTTT-CTGCAG--ACATGGG  1110


seq1: chr7_62067621_62068199
seq2: B6Ng01-336G05.g_63_641 (reverse)

seq1  AGTCTCACAGGATTCTTTAGATCTGCCATATTAAGTGTAATACCATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCACAGGATTCTTTAGATCTGCCATATTAAGTGTAATACCATATTT  50

seq1  TATGTTAATAAGTTTGTTTATTGAGTACTTGGTCTTTGGGATGGGTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAATAAGTTTGTTTATTGAGTACTTGGTCTTTGGGATGGGTTAGT  100

seq1  GTTGTATATCCTGTGGTTCACTTAATTACCTCTTCACACTTGCCTCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATATCCTGTGGTTCACTTAATTACCTCTTCACACTTGCCTCATCA  150

seq1  TCTCTTCTCATGTTCCTTCTGCTTTTTATTTCACTGATTTTTATTCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTCATGTTCCTTCTGCTTTTTATTTCACTGATTTTTATTCTAGA  200

seq1  TTATATTCATTCCACTGCTATGTTTTAAACTAGTTCTCTCTTTCTCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTCATTCCACTGCTATGTTTTAAACTAGTTCTCTCTTTCTCTTTT  250

seq1  TTTTCTACTCCTCTTTGGTCTGAAATAAAGTTATTTAGTTTCCAATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACTCCTCTTTGGTCTGAAATAAAGTTATTTAGTTTCCAATTTTT  300

seq1  ATTTTTGTTCTAATATATACTTATTGGTCTAAATTTTATTCTTTTATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTTCTAATATATACTTATTGGTCTAAATTTTATTCTTTTATTCA  350

seq1  GATTTTCTACATCCTAGAATTTTGTTGTGTTATTGTTTTTGTTGTATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTACATCCTAGAATTTTGTTGTGTTATTGTTTTTGTTGTATTTT  400

seq1  GTTGTATTACTGTATTTGATCCAGGTTCTTTTTTAATATGCTATTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATTACTGTATTTGATCCAGGTTCTTTTTTAATATGCTATTTATTT  450

seq1  CTTCTTCAAAACCTTGTTGATGTTCTGTTTAATTTTTTATGTTTGTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCAAAACCTTGTTGATGTTCTGTTTAATTTTTTATGTTTGTGTTC  500

seq1  TGTCAGTGATTAATTAATTTTCAAATATTGTAATATTGTGACCACAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTGATTAATTAATTTTCAAATATTGTAATATTGTGACCACAAAAG  550

seq1  ATGCATTAGCTTAATATAATATTGAATTC  579
      |||||||||||||||||||||||||||||
seq2  ATGCATTAGCTTAATATAATATTGAATTC  579


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