BAC Information

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BAC

Clone NameB6Ng01-336J14
Chromosome7 (Build37)
Map Location 61,184,330 - 61,288,425
singlet/doubletdoublet
Overlap genenone
Upstream geneGm1865, LOC100040718, LOC668789
Downstream geneMrps33p, LOC622146, Luzp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336J14.bB6Ng01-336J14.g
ACCGA121473GA121474
length1,1511,128
definitionB6Ng01-336J14.b B6Ng01-336J14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,287,181 - 61,288,425)(61,184,330 - 61,185,468)
sequence
gaattcaaggagttgtattctttctctcattctacaatttgaaatcttaa
cactctagcatgacacattaatgacatttttaaaaggagaattttaatct
gatttttgctgcccaccacttatttaagccctttcctagcctgtgcagct
ggagatccaattgagatagcatccttgtgataatgtgatgttacatgaca
aaaaatgatgaaatttccaaatataaggaaagtgtctttatttcttccaa
caattgtatgcatctgcaaggggatgtgtaatgttaaatatgtacctaca
attaacatataaatgcaaatgtaactatccgtagccaaagcagattactt
tatttctttcttctggatttcggtgaagagactcaggcggctatgcaagg
acttaaaacccattaaaacctgataagataagcaggctttctttggtaaa
ttaccacttttgtcaagacatattatgaagacttcttaaaattgaaacca
tcttttaaaatcatcacctaaaacatgtcaataaaaattatcctatgcaa
tctagtttttcattttctggtgattcttttaaaattccacaggtatgtgc
ttcaaagctctctgggggatttttaggctttttatttaaaagcagatttc
ccttagattcttcacatatataattctcatagggttaggtctcaacattt
catttgaaacacacgaagttgcttagcaacgatcttactccaccatcccc
atcagtcataaagacactaactcacacaccaagactgaacacgaaaaaag
gaaaatacaaaaaggaaatatcagtggctcatctatgtgaagtgagatgc
aggtattgagggctgaatgtaccacaaaagtcctcttttttaaattctca
ttgctaaaacatgcatgtccagatcttcaaaggggacctcatcctttgaa
cctcacaaattttgttggattaataataaaaagattgactcagagatcct
gtgtgctaacatgggactaaaaagcctaatcatttgcatggataaaaaaa
caaattaaaaatgaagagaggaaatcacaagatagtttatagaatagaaa
tgaatagagtgtcttctcaatataaaaggagaggatgtgtttactctctg
a
gaattccattctctgtgtgtgctagaaagtattttaaattttatttaaaa
tttatgcagtaaacataaatttctatggttgggttttttttttttttaat
ttgctttgcctttctgttttgaaggcggttcttctgcattgacaaggatg
atatattaaattcatgtgatcctcctttctcagtatactgagcaggtgga
ccaatagctacatgcttctgtatagaaaaatgacatagttaaaatgtcct
ccatttttctggaaaaatggaaacagtgaattttattgttatcttcattt
tttagcttccttaattctccttgagaactttctgaagttaaagctagagt
tgaaacactggacaaacagatttttgtctacaaatgttaactaatgcata
gaaggaaataaaattgaaggtgacctagagcatagactagaaacagtcta
tttgatgcttgctcattataagggctctctatgtttgacttaacctcaat
tgtcattaaatgagatcagatcaccttaagataattgatttacatggaag
gttgcctctttaacttatctgaaaaggtagcctaaaatagatttctttgt
cttccagtcagcactgatgtaaatgtgtagttgcaatcctaaacctggtt
ggcttcaacatgtgccacagaatattgaggtagctacagtcattacctag
tggtattctgctgtcatcaatacactgtattaacatgttaatatgtgaat
tttcatatttatgtgcttagattttactttttctcatatatgtacattga
acacaaatatattcttttgggaacttgctgacattcagaaatatgtttat
aaaactaaatatatttttgggtacaagcaaaataaatttgtactaagtat
tgcaattttgttccaaaaacatattgactgttcctaactatagctcctgt
tattcatcttttattcctcaacataatgttgttttctaaacacagctctc
attattcatcctttgtcctaaaatcatgttgactattctgcacagagtct
catgattcacccacgtttttatcacccaaataatactggtcctactatag
ctcgataatcacatttgttcccaaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61287181_61288425
seq2: B6Ng01-336J14.b_45_1195 (reverse)

seq1  TCAGAGAGTAGAAAGGAAACTTGTAGTCTCGTCTCCAAATTCTGAGTCTT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TGTAACTGGAGTAGAGTTGGTACCCAGAGCTGTGGTTTCAAAGAGGTAAC  100
                                           ||| ||||  |||
seq2  -------------------------------------TCAGAGAGTAAAC  13

seq1  ACATCCTCTC--TTTATATTGAGGAAGACACTTCTATTCATTTTCTATTC  148
      ||||||||||  |||||||||| |||||||| |||||||| |||||||||
seq2  ACATCCTCTCCTTTTATATTGA-GAAGACAC-TCTATTCA-TTTCTATTC  60

seq1  TATAAACTATCTTGTGATTTTCCTCTTCTTCATTTTTAATTTGTTTTTTA  198
      ||||||||||||||||| ||||||| ||||||||||||||||||||||| 
seq2  TATAAACTATCTTGTGA-TTTCCTC-TCTTCATTTTTAATTTGTTTTTTT  108

seq1  TTCCATGCAAAATGGATTAGGCTTTTTAGTCCCATGTTAGCACACAGGAT  248
       ||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  ATCCATGCAAA--TGATTAGGCTTTTTAGTCCCATGTTAGCACACAGGAT  156

seq1  CTCCTGAGTCAATCTTTTTTATTATTAATCCAACAAAATTTGTGAGGTTC  298
      || ||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CT-CTGAGTCAATC-TTTTTATTATTAATCCAACAAAATTTGTGAGGTTC  204

seq1  AAAGGATGAGGTCCCCTTTGAAGATCTGGACATGCATGTTTTAGCAATGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATGAGGTCCCCTTTGAAGATCTGGACATGCATGTTTTAGCAATGA  254

seq1  GAATTTAAAAAAGAGGACTTTTGTGGTACATTCAGCCCTCAATACCTGCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAAAAAAGAGGACTTTTGTGGTACATTCAGCCCTCAATACCTGCA  304

seq1  TCTCACTTCACATAGATGAGCCACTGATATTTCCTTTTTGTATTTTCCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTTCACATAGATGAGCCACTGATATTTCCTTTTTGTATTTTCCTT  354

seq1  TTTTCGTGTTCAGTCTTGGTGTGTGAGTTAGTGTCTTTATGACTGATGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGTGTTCAGTCTTGGTGTGTGAGTTAGTGTCTTTATGACTGATGGG  404

seq1  GATGGTGGAGTAAGATCGTTGCTAAGCAACTTCGTGTGTTTCAAATGAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGGAGTAAGATCGTTGCTAAGCAACTTCGTGTGTTTCAAATGAAA  454

seq1  TGTTGAGACCTAACCCTATGAGAATTATATATGTGAAGAATCTAAGGGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGACCTAACCCTATGAGAATTATATATGTGAAGAATCTAAGGGAA  504

seq1  ATCTGCTTTTAAATAAAAAGCCTAAAAATCCCCCAGAGAGCTTTGAAGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTTTTAAATAAAAAGCCTAAAAATCCCCCAGAGAGCTTTGAAGCA  554

seq1  CATACCTGTGGAATTTTAAAAGAATCACCAGAAAATGAAAAACTAGATTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTGTGGAATTTTAAAAGAATCACCAGAAAATGAAAAACTAGATTG  604

seq1  CATAGGATAATTTTTATTGACATGTTTTAGGTGATGATTTTAAAAGATGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGATAATTTTTATTGACATGTTTTAGGTGATGATTTTAAAAGATGG  654

seq1  TTTCAATTTTAAGAAGTCTTCATAATATGTCTTGACAAAAGTGGTAATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTTTAAGAAGTCTTCATAATATGTCTTGACAAAAGTGGTAATTT  704

seq1  ACCAAAGAAAGCCTGCTTATCTTATCAGGTTTTAATGGGTTTTAAGTCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGAAAGCCTGCTTATCTTATCAGGTTTTAATGGGTTTTAAGTCCT  754

seq1  TGCATAGCCGCCTGAGTCTCTTCACCGAAATCCAGAAGAAAGAAATAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGCCGCCTGAGTCTCTTCACCGAAATCCAGAAGAAAGAAATAAAG  804

seq1  TAATCTGCTTTGGCTACGGATAGTTACATTTGCATTTATATGTTAATTGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGCTTTGGCTACGGATAGTTACATTTGCATTTATATGTTAATTGT  854

seq1  AGGTACATATTTAACATTACACATCCCCTTGCAGATGCATACAATTGTTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACATATTTAACATTACACATCCCCTTGCAGATGCATACAATTGTTG  904

seq1  GAAGAAATAAAGACACTTTCCTTATATTTGGAAATTTCATCATTTTTTGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATAAAGACACTTTCCTTATATTTGGAAATTTCATCATTTTTTGT  954

seq1  CATGTAACATCACATTATCACAAGGATGCTATCTCAATTGGATCTCCAGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAACATCACATTATCACAAGGATGCTATCTCAATTGGATCTCCAGC  1004

seq1  TGCACAGGCTAGGAAAGGGCTTAAATAAGTGGTGGGCAGCAAAAATCAGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGGCTAGGAAAGGGCTTAAATAAGTGGTGGGCAGCAAAAATCAGA  1054

seq1  TTAAAATTCTCCTTTTAAAAATGTCATTAATGTGTCATGCTAGAGTGTTA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTCTCCTTTTAAAAATGTCATTAATGTGTCATGCTAGAGTGTTA  1104

seq1  AGATTTCAAATTGTAGAATGAGAGAAAGAATACAACTCCTTGAATTC  1245
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCAAATTGTAGAATGAGAGAAAGAATACAACTCCTTGAATTC  1151

seq1: chr7_61184330_61185468
seq2: B6Ng01-336J14.g_64_1191

seq1  GAATTCCATTCTCTGTGTGTGCTAGAAAGTATTTTAAATTTTATTTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCTCTGTGTGTGCTAGAAAGTATTTTAAATTTTATTTAAAA  50

seq1  TTTATGCAGTAAACATAAATTTCTATGGTTGGGTTTTTTTTTTTTTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCAGTAAACATAAATTTCTATGGTTGGGTTTTTTTTTTTTTTAAT  100

seq1  TTGCTTTGCCTTTCTGTTTTGAAGGCGGTTCTTCTGCATTGACAAGGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGCCTTTCTGTTTTGAAGGCGGTTCTTCTGCATTGACAAGGATG  150

seq1  ATATATTAAATTCATGTGATCCTCCTTTCTCAGTATACTGAGCAGGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAAATTCATGTGATCCTCCTTTCTCAGTATACTGAGCAGGTGGA  200

seq1  CCAATAGCTACATGCTTCTGTATAGAAAAATGACATAGTTAAAATGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGCTACATGCTTCTGTATAGAAAAATGACATAGTTAAAATGTCCT  250

seq1  CCATTTTTCTGGAAAAATGGAAACAGTGAATTTTATTGTTATCTTCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTCTGGAAAAATGGAAACAGTGAATTTTATTGTTATCTTCATTT  300

seq1  TTTAGCTTCCTTAATTCTCCTTGAGAACTTTCTGAAGTTAAAGCTAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTTCCTTAATTCTCCTTGAGAACTTTCTGAAGTTAAAGCTAGAGT  350

seq1  TGAAACACTGGACAAACAGATTTTTGTCTACAAATGTTAACTAATGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACACTGGACAAACAGATTTTTGTCTACAAATGTTAACTAATGCATA  400

seq1  GAAGGAAATAAAATTGAAGGTGACCTAGAGCATAGACTAGAAACAGTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAATAAAATTGAAGGTGACCTAGAGCATAGACTAGAAACAGTCTA  450

seq1  TTTGATGCTTGCTCATTATAAGGGCTCTCTATGTTTGACTTAACCTCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGCTTGCTCATTATAAGGGCTCTCTATGTTTGACTTAACCTCAAT  500

seq1  TGTCATTAAATGAGATCAGATCACCTTAAGATAATTGATTTACATGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTAAATGAGATCAGATCACCTTAAGATAATTGATTTACATGGAAG  550

seq1  GTTGCCTCTTTAACTTATCTGAAAAGGTAGCCTAAAATAGATTTCTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTCTTTAACTTATCTGAAAAGGTAGCCTAAAATAGATTTCTTTGT  600

seq1  CTTCCAGTCAGCACTGATGTAAATGTGTAGTTGCAATCCTAAACCTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGTCAGCACTGATGTAAATGTGTAGTTGCAATCCTAAACCTGGTT  650

seq1  GGCTTCAACATGTGCCACAGAATATTGAGGTAGCTACAGTCATTACCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCAACATGTGCCACAGAATATTGAGGTAGCTACAGTCATTACCTAG  700

seq1  TGGTATTCTGCTGTCATCAATACACTGTATTAACATGTTAATATGTGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTCTGCTGTCATCAATACACTGTATTAACATGTTAATATGTGAAT  750

seq1  TTTCATATTTATGTGCTTAGATTTTACTTTTTCTCATATATGTACATTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATTTATGTGCTTAGATTTTACTTTTTCTCATATATGTACATTGA  800

seq1  ACACAAATATATTCTTTTGGGAACTTGCTGACATTCAGAAATATGTTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATATATTCTTTTGGGAACTTGCTGACATTCAGAAATATGTTTAT  850

seq1  AAAACTAAATATATTTTTGGGTACAAGCAAAATAAATTTGTACTAAGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAAATATATTTTTGGGTACAAGCAAAATAAATTTGTACTAAGTAT  900

seq1  TGCAATTTTGTTCC-AAAACATATTGACTGTTCCTAACTATAGCTCCTGT  949
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGCAATTTTGTTCCAAAAACATATTGACTGTTCCTAACTATAGCTCCTGT  950

seq1  TATTCATCTTTTATTCCTCAAAACATAATGTTGTTTTCTAAACACAGCTC  999
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TATTCATCTTTTATTCCTC--AACATAATGTTGTTTTCTAAACACAGCTC  998

seq1  TCATTATTCATCCTTTGTTCCTAAAATCATGTTGACTATTCTGCACCAGA  1049
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  TCATTATTCATCCTTTG-TCCTAAAATCATGTTGACTATTCTGCA-CAGA  1046

seq1  GGTCTCATGATTCA-CCACGTTTTTATTCACCCAAAATAATAACTGTTCC  1098
       ||||||||||||| ||||||||||| |||||| ||||||| |||| |||
seq2  -GTCTCATGATTCACCCACGTTTTTA-TCACCC-AAATAAT-ACTGGTCC  1092

seq1  TTACTATAGCTCCGGTTATTCAACATTTGTTCCCCAAACAT  1139
       |||||||||||  | || || ||||||||| |||||||||
seq2  -TACTATAGCTC--GATAATC-ACATTTGTT-CCCAAACAT  1128