BAC Information

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BAC

Clone NameB6Ng01-336K22
Chromosome7 (Build37)
Map Location 70,921,446 - 71,004,468
singlet/doubletdoublet
Overlap geneLOC665083
Upstream geneLOC622243, EG622251, Chrna7, Otud7a, LOC545971, LOC100041386
Downstream geneKlf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336K22.bB6Ng01-336K22.g
ACCGA121530GA121531
length1,101739
definitionB6Ng01-336K22.b B6Ng01-336K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,921,446 - 70,922,558)(71,003,732 - 71,004,468)
sequence
gaattccctcacagacatcccccattcaacaggcatgagggcctcgtgaa
catgctgaaggaagatctgaggagtcccaacagagcagcccacaaccgaa
atgacctttgctgtcagtggcaaaaagaaaggcagggcaggcgtggtagc
ttatttctaaacagcaattgagcagtagccagtgtctccattataaaaca
ggactgtcccatggttgtacgtgttatgatttaattgattgcatgtctag
agttcagatcataaatggctaaccaaatgttttctatttaagtcaaactg
gcttgtagcaaagtgacataatcttttttttaaacagcaatgccagtgaa
ataccctccctactttcccttctaaagataaagctgggtctagttaataa
tggtctaccttccaccaagatggggaatactacctcaaaacctactccag
gttggctttatgtttagattcaaataactgcttattcaactaaatttctg
gaggagaattccctgcatcatctcatagcacaacagaatcacctgtttca
gcttatgttctcagcctgttacaagcacgcattaaagataacaaagtggt
ctgattttgtccttgtctcttctgatttagttagaattctctgtatttat
aaaactctgtctttgacttatggaaagacattttagtgtggcttatatat
aatatcaaaagaagaatatttaacatctctcaattttttttctgtaaaat
ctaaaaattcctaagtgtgcccagtttaaaagtcggcagaatatacctgt
caggtatgccaagcctatctcagctgctcagagcgctgcctgcaggagtc
agtgacattgttgctgagcatcagggtatctggagcactagaacagggac
atccttcagattcttgtctttggacatctcttggaaatgggtccacatga
ctcagaagttgatgacaaacccagcttctacccctcagtacccagacagg
ctcagagacagctgaacctggctgaggagtagttacagaatgactgattc
gtctcccaaagatgtacgtagagctgtccaggatccagatgggagatgat
g
gaattcaggagccagggggtcccatacatggctgcatcagcatcctttgg
gcagcttgctgaacacacattctgattttacaaacccaggaaggagctac
agtgtttcctgggtgctgggtgctgcttctgacacttaatgttataaact
aactctatgccttttccctttctttcaggaagaaagaaaggagcgtgggc
aaggccagttgagcctgttgggtgtagtttggggtggggtgaccttgaca
tgcctcctcctaaaaaaaaaaaaaaaaaccaacaacaaaacaaaaaacaa
cctcagaactgtttttgtttgtttgtttgtttgtttttgtttgtctgttt
tgttttaagtacccagagtgcctatgggcctctgacaaggctctttgtcc
tggacacccctttggccttgttacagtctaatgggccttcctggaagtgg
agctgggtccttagtcctgtccagatgtccctgtcctggagagtgccggg
ccaggagagggcagggtgaggtgattgctaggaaaggaagtacaccgggt
cacagtcagcctcttcaagccgatttaggaatgtcaggaggggaggggag
gcaggtacagtggaggggtttctgttagagactttggacctcacgtggag
ggcagagtgacccaggggttcctcccggttccccacacgtgcggtagacg
gcccctgtggtcttgctgtatggttgtggcacggtagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70921446_70922558
seq2: B6Ng01-336K22.b_44_1144

seq1  GAATTCCCTCACAGACATCCCCCATTCAACAGGCATGAGGGCCTCGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCACAGACATCCCCCATTCAACAGGCATGAGGGCCTCGTGAA  50

seq1  CATGCTGAAGGAAGATCTGAGGAGTCCCAACAGAGCAGCCCACAACCGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGAAGGAAGATCTGAGGAGTCCCAACAGAGCAGCCCACAACCGAA  100

seq1  ATGACCTTTGCTGTCAGTGGCAAAAAGAAAGGCAGGGCAGGCGTGGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTTTGCTGTCAGTGGCAAAAAGAAAGGCAGGGCAGGCGTGGTAGC  150

seq1  TTATTTCTAAACAGCAATTGAGCAGTAGCCAGTGTCTCCATTATAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTAAACAGCAATTGAGCAGTAGCCAGTGTCTCCATTATAAAACA  200

seq1  GGACTGTCCCATGGTTGTACGTGTTATGATTTAATTGATTGCATGTCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTCCCATGGTTGTACGTGTTATGATTTAATTGATTGCATGTCTAG  250

seq1  AGTTCAGATCATAAATGGCTAACCAAATGTTTTCTATTTAAGTCAAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGATCATAAATGGCTAACCAAATGTTTTCTATTTAAGTCAAACTG  300

seq1  GCTTGTAGCAAAGTGACATAATCTTTTTTTTAAACAGCAATGCCAGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAGCAAAGTGACATAATCTTTTTTTTAAACAGCAATGCCAGTGAA  350

seq1  ATACCCTCCCTACTTTCCCTTCTAAAGATAAAGCTGGGTCTAGTTAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTCCCTACTTTCCCTTCTAAAGATAAAGCTGGGTCTAGTTAATAA  400

seq1  TGGTCTACCTTCCACCAAGATGGGGAATACTACCTCAAAACCTACTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACCTTCCACCAAGATGGGGAATACTACCTCAAAACCTACTCCAG  450

seq1  GTTGGCTTTATGTTTAGATTCAAATAACTGCTTATTCAACTAAATTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTTTATGTTTAGATTCAAATAACTGCTTATTCAACTAAATTTCTG  500

seq1  GAGGAGAATTCCCTGCATCATCTCATAGCACAACAGAATCACCTGTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAATTCCCTGCATCATCTCATAGCACAACAGAATCACCTGTTTCA  550

seq1  GCTTATGTTCTCAGCCTGTTACAAGCACGCATTAAAGATAACAAAGTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGTTCTCAGCCTGTTACAAGCACGCATTAAAGATAACAAAGTGGT  600

seq1  CTGATTTTGTCCTTGTCTCTTCTGATTTAGTTAGAATTCTCTGTATTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTGTCCTTGTCTCTTCTGATTTAGTTAGAATTCTCTGTATTTAT  650

seq1  AAAACTCTGTCTTTGACTTATGGAAAGACATTTTAGTGTGGCTTATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTGTCTTTGACTTATGGAAAGACATTTTAGTGTGGCTTATATAT  700

seq1  AATATCAAAAGAAGAATATTTAACATCTCTCAATTTTTTTTCTGTAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAAAAGAAGAATATTTAACATCTCTCAATTTTTTTTCTGTAAAAT  750

seq1  CTAAAAATTCCTAAGTGTGCCCAGTTTAAAAGTCGGCAGAATATACCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATTCCTAAGTGTGCCCAGTTTAAAAGTCGGCAGAATATACCTGT  800

seq1  CAGGTATGCCAAGCCTATCTCAGCTGCTCAAGAGCGCTGCCTGCAAGAGT  850
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  CAGGTATGCCAAGCCTATCTCAGCTGCTC-AGAGCGCTGCCTGCAGGAGT  849

seq1  CAGTGACATTGTTGCTGAGCATCAGGGTATCTGGAGCACTAG-ACAGGGA  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGTGACATTGTTGCTGAGCATCAGGGTATCTGGAGCACTAGAACAGGGA  899

seq1  CATCCTTCAGATTC-TGTCTTTGGACATCTCTTGGAAATGGGTCACAATG  948
      |||||||||||||| |||||||||||||||||||||||||||||   |||
seq2  CATCCTTCAGATTCTTGTCTTTGGACATCTCTTGGAAATGGGTCCACATG  949

seq1  ACTCAGA--GTGATGAACAAACCCAGCTTCCTTACACCTCAGTACACAGA  996
      |||||||   ||||| ||||||||||||||  ||| ||||||||| ||||
seq2  ACTCAGAAGTTGATG-ACAAACCCAGCTTC--TACCCCTCAGTACCCAGA  996

seq1  CA-GCTCAGAGACCAGCTGACACTGGCTGAGGAGTAGTACCAGGAATTAA  1045
      || ||||||||| |||||||  ||||||||||||||||  || |||| | 
seq2  CAGGCTCAGAGA-CAGCTGAACCTGGCTGAGGAGTAGTTACA-GAATGA-  1043

seq1  CATGATTCGTCTCCCAAAGATGTACGTTAGAAGCTTGGTCCCCAGGATCT  1095
        |||||||||||||||||||||||| ||| ||||  ||  |||||||| 
seq2  -CTGATTCGTCTCCCAAAGATGTACG-TAG-AGCT--GT--CCAGGATC-  1085

seq1  CAGTATTGGGAGATGATG  1113
      |||   ||||||||||||
seq2  CAG--ATGGGAGATGATG  1101

seq1: chr7_71003732_71004468
seq2: B6Ng01-336K22.g_64_802 (reverse)

seq1  CACTACC-TGCCACAACCATACAGCAAGACCACAGGGGCCGTCTACCGCA  49
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACCGTGCCACAACCATACAGCAAGACCACAGGGGCCGTCTACCGCA  50

seq1  CGTGTGGGG-ACCGGGAGGAACCCCTGGGTCACTCTGCCCTCCACGTGAG  98
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGGGGAACCGGGAGGAACCCCTGGGTCACTCTGCCCTCCACGTGAG  100

seq1  GTCCAAAGTCTCTAACAGAAACCCCTCCACTGTACCTGCCTCCCCTCCCC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAAGTCTCTAACAGAAACCCCTCCACTGTACCTGCCTCCCCTCCCC  150

seq1  TCCTGACATTCCTAAATCGGCTTGAAGAGGCTGACTGTGACCCGGTGTAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACATTCCTAAATCGGCTTGAAGAGGCTGACTGTGACCCGGTGTAC  200

seq1  TTCCTTTCCTAGCAATCACCTCACCCTGCCCTCTCCTGGCCCGGCACTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCCTAGCAATCACCTCACCCTGCCCTCTCCTGGCCCGGCACTCT  250

seq1  CCAGGACAGGGACATCTGGACAGGACTAAGGACCCAGCTCCACTTCCAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGGGACATCTGGACAGGACTAAGGACCCAGCTCCACTTCCAGG  300

seq1  AAGGCCCATTAGACTGTAACAAGGCCAAAGGGGTGTCCAGGACAAAGAGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCATTAGACTGTAACAAGGCCAAAGGGGTGTCCAGGACAAAGAGC  350

seq1  CTTGTCAGAGGCCCATAGGCACTCTGGGTACTTAAAACAAAACAGACAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCAGAGGCCCATAGGCACTCTGGGTACTTAAAACAAAACAGACAAA  400

seq1  CAAAAACAAACAAACAAACAAACAAAAACAGTTCTGAGGTTGTTTTTTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAAACAAACAAACAAACAAAAACAGTTCTGAGGTTGTTTTTTGT  450

seq1  TTTGTTGTTGGTTTTTTTTTTTTTTTTTAGGAGGAGGCATGTCAAGGTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTGGTTTTTTTTTTTTTTTTTAGGAGGAGGCATGTCAAGGTCA  500

seq1  CCCCACCCCAAACTACACCCAACAGGCTCAACTGGCCTTGCCCACGCTCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCAAACTACACCCAACAGGCTCAACTGGCCTTGCCCACGCTCC  550

seq1  TTTCTTTCTTCCTGAAAGAAAGGGAAAAGGCATAGAGTTAGTTTATAACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTCCTGAAAGAAAGGGAAAAGGCATAGAGTTAGTTTATAACA  600

seq1  TTAAGTGTCAGAAGCAGCACCCAGCACCCAGGAAACACTGTAGCTCCTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTCAGAAGCAGCACCCAGCACCCAGGAAACACTGTAGCTCCTTC  650

seq1  CTGGGTTTGTAAAATCAGAATGTGTGTTCAGCAAGCTGCCCAAAGGATGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTGTAAAATCAGAATGTGTGTTCAGCAAGCTGCCCAAAGGATGC  700

seq1  TGATGCAGCCATGTATGGGACCCCCTGGCTCCTGAATTC  737
      |||||||||||||||||||||||||||||||||||||||
seq2  TGATGCAGCCATGTATGGGACCCCCTGGCTCCTGAATTC  739