BAC Information

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BAC

Clone NameB6Ng01-336O05
Chromosome7 (Build37)
Map Location 26,085,243 - 26,269,462
singlet/doubletdoublet
Overlap geneEG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1
Upstream geneZfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3
Downstream geneCeacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c, LOC100043195, Nlrp4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336O05.bB6Ng01-336O05.g
ACCGA121676GA121677
length1,0861,148
definitionB6Ng01-336O05.b B6Ng01-336O05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,085,243 - 26,086,333)(26,268,306 - 26,269,462)
sequence
gaattcctaatatattgtctctgaacagactctgttggcagtggtcactg
gcatggcgtagcatgatgctgtgtgcacttcaaatgaccaaagctgccat
gaaattatttcattttttgtttgtttgtttgtttgtttgtttttgttttg
tttttttcttttgagacaaggtctatggagttgtcttgcctgttctggat
ataagtctatgtagaccaggctggtcttgaactcacagaactcccccttc
ggagtgagtgctgggattaaaggccctgccaccacaaattttgagatgca
aagttgatgagcaccttagatttattagtttgattctgttgtactttcag
aaaccttttactagtaccaacattttcatggcatcccctcactgttttat
gacccagaggtggtttcctgaaacagtgtatggacacggtttgggagctt
ctaaggactgggaagcacaaagaaaagacacaggtcataacattactaac
atttggacagggatatacactagggtagtttagtttgacttgaaagtttg
ggggccacacacctgtaattccagcatttgagaagtaaaggcaagagaat
agttccagactatcctgagtgagctgaaggtgtgagggacatgtgcagag
aaaggagttggggagagagaaaattctgaagcaagcgaaagaatcaaacc
tcgcaagcattcattcatatgtatgttggttcattccatccttctatgaa
ccatatcggggagagtcctacttccaactggtttcacaaattaggacata
ggctctgggcagttacaaagttttctaaagtcacagggctcaaaaaatgc
tgcttcaggaatgcctccaaaggccatctttgtgtgcatggaacctagca
ccttccactgggaccagtcaagtggtcagccagcagccttagccaatcag
cattgtgtaaggcgggccgggctagaaaccctcgaagccaatccagtgag
agaggggcggactctgggacagggcttgcgggccataactgtcaatcttg
tgctcgtgcttcttccttggcaagggcgtggaaggg
gaattccttcttaccctagttgctttgctcgtggtgtttatcacagcaat
agaaagcaaactaagtcacctagtttccaacagtcccaatatctacagac
atctcccacaagcctgctctaaaattgtcttcttctcatgtctctgagga
tattactttgcctcctggccatcactcaccagaagagaccaggtgattat
aggggagtcacctagacagatgacaaagctgtcccagaaaggtcaagagg
acatgaacagaccccagacacagctcagcccacacaggcaggtagcatct
ctccctgagactattcataggatgatgaggtccacattctctcttaggtc
acacaagtcccatcctcctgcacatctaggacacaaatcttctaagataa
ctgttcctgggcttccattcctggatcagaacctaactggtgacaccagt
gacaatggttccatcccctccccagtcatcactccactggcccctttcca
gacctcacagacaatctctgtcactttcctgctgggagtaaatcccactt
cccagagcattgagattgctcaatgggcagactgggctcagcagggtttc
tgtatcacaagagggaataaaccacagggtttaggaaggacaggggctcc
ctctgatgctggcagggccagggccaggacatggcagaggttagccctgg
ggtaacctggtctcgaaaatcaagtgatcctgattaacattcctactcaa
agtgtgttctagaggactggggccatgaagacagaagggcagaaaggact
ggaaggccacactgagagcagaagaggttagggactcagcccgtgtgtct
ctgggtgctgctgctgcctgtctgaaagttcagcttcaaggaaggacaag
agggcctggcaccagagcagcaaggcacggaagcagtgcgggagctgaag
cgcttctccacagagagaggacagagcagcagagagaccatgctgttcaa
cctcatgtgcataggtaatgtcctagcagggagttctgctcactagtgtc
acttgagaaaactcttcctggtgtgcgcccagcgcaatacatccacacaa
tggaacttctcctaggagtcctttagggtcacttcacacatgcagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_26085243_26086333
seq2: B6Ng01-336O05.b_46_1131

seq1  GAATTCCTAATATATTGTCTCTGAACAGACTCTG-AGGCAGTGGTCACTG  49
      ||||||||||||||||||||||||||||||||||  ||||||||||||||
seq2  GAATTCCTAATATATTGTCTCTGAACAGACTCTGTTGGCAGTGGTCACTG  50

seq1  GCATGGCGTAGCATGATGCTGTGTGCACTTCAAATGACCAAAGCTGCCAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCGTAGCATGATGCTGTGTGCACTTCAAATGACCAAAGCTGCCAT  100

seq1  GAAATTATTTCATTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTATTTCATTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTG  150

seq1  TTTTTTTCTTTTGAGACAAGGTCTATGGAGTTGTCTTGCCTGTTCTGGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTTTTGAGACAAGGTCTATGGAGTTGTCTTGCCTGTTCTGGAT  200

seq1  ATAAGTCTATGTAGACCAGGCTGGTCTTGAACTCACAGAACTCCCCCTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCTATGTAGACCAGGCTGGTCTTGAACTCACAGAACTCCCCCTTC  250

seq1  GGAGTGAGTGCTGGGATTAAAGGCCCTGCCACCACAAATTTTGAGATGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAGTGCTGGGATTAAAGGCCCTGCCACCACAAATTTTGAGATGCA  300

seq1  AAGTTGATGAGCACCTTAGATTTATTAGTTTGATTCTGTTGTACTTTCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGATGAGCACCTTAGATTTATTAGTTTGATTCTGTTGTACTTTCAG  350

seq1  AAACCTTTTACTAGTACCAACATTTTCATGGCATCCCCTCACTGTTTTAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTTTACTAGTACCAACATTTTCATGGCATCCCCTCACTGTTTTAT  400

seq1  GACCCAGAGGTGGTTTCCTGAAACAGTGTATGGACACGGTTTGGGAGCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGAGGTGGTTTCCTGAAACAGTGTATGGACACGGTTTGGGAGCTT  450

seq1  CTAAGGACTGGGAAGCACAAAGAAAAGACACAGGTCATAACATTACTAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGACTGGGAAGCACAAAGAAAAGACACAGGTCATAACATTACTAAC  500

seq1  ATTTGGACAGGGATATACACTAGGGTAGTTTAGTTTGACTTGAAAGTTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGACAGGGATATACACTAGGGTAGTTTAGTTTGACTTGAAAGTTTG  550

seq1  GGGGCCACACACCTGTAATTCCAGCATTTGAGAAGTAAAGGCAAGAGAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCACACACCTGTAATTCCAGCATTTGAGAAGTAAAGGCAAGAGAAT  600

seq1  AGTTCCAGACTATCCTGAGTGAGCTGAAGGTGTGAGGGACATGTGCAGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGACTATCCTGAGTGAGCTGAAGGTGTGAGGGACATGTGCAGAG  650

seq1  AAAGGAGTTGGGGAGAGAGAAAATTCTGAAGCAAGCGAAAGAATCAAACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGTTGGGGAGAGAGAAAATTCTGAAGCAAGCGAAAGAATCAAACC  700

seq1  TCGCAAGCATTCATTCATATGTATGTTGGTTCATTCCATCCTTCTATGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAAGCATTCATTCATATGTATGTTGGTTCATTCCATCCTTCTATGAA  750

seq1  CCATATCGGGGAGAGTCCTACTTCCAACTGGTTTCACAAATTAGGACATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCGGGGAGAGTCCTACTTCCAACTGGTTTCACAAATTAGGACATA  800

seq1  GGCTCTGGGCAGTTACAAAGTTTTCTAAAGTCACAGGGCTCAAAAAATGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGGGCAGTTACAAAGTTTTCTAAAGTCACAGGGCTCAAAAAATGC  850

seq1  TGCTTCAGGAATGCCTCCAAAGGCCATCTTTGTGTGCATGGAACCTAGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGGAATGCCTCCAAAGGCCATCTTTGTGTGCATGGAACCTAGCA  900

seq1  CCTTCCACTGGGACCAGTCAAGTGGTCAGCCAGCAGCCTTAGCCAATCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCACTGGGACCAGTCAAGTGGTCAGCCAGCAGCCTTAGCCAATCAG  950

seq1  CATTGTGTAAGGCGGGCGGGCCTAGAAACCCTCGAAGCCAATCCAGTGAG  999
      ||||||||||||||||| || |||||||||||||||||||||||||||| 
seq2  CATTGTGTAAGGCGGGCCGGGCTAGAAACCCTCGAAGCCAATCCAGTGA-  999

seq1  GAGAGGGGCGGACTCT-GGACAGGGCTGGGCGGGGCCATAACTGTCAATC  1048
      |||||||||||||||| |||||||||| |   ||||||||||||||||||
seq2  GAGAGGGGCGGACTCTGGGACAGGGCTTG--CGGGCCATAACTGTCAATC  1047

seq1  TTGGTGCCTCGTGCTTCTCCCTGGGCAAGGGGCGTGGCAAGGG  1091
      || ||| ||||||||||| ||| ||||| |||||||| |||||
seq2  TT-GTG-CTCGTGCTTCTTCCTTGGCAA-GGGCGTGG-AAGGG  1086

seq1: chr7_26268306_26269462
seq2: B6Ng01-336O05.g_66_1213 (reverse)

seq1  CTGCTGCATGTGTGAAGTGGACACTTAAGGGCTCCTTAGAGA--GTCCAT  48
      |||||||||||||||||| ||| || |||| |||||  ||||   |||||
seq2  CTGCTGCATGTGTGAAGT-GACCCTAAAGGACTCCTAGGAGAAGTTCCAT  49

seq1  TGTGTTGGATGGTATTGCGCTGGGGCGCACA-CAGGAAGGAGTTTTCCTC  97
      |||| ||||| |||||||||| ||||||||| |||||| ||||||| |||
seq2  TGTG-TGGAT-GTATTGCGCT-GGGCGCACACCAGGAA-GAGTTTT-CTC  94

seq1  AAGTGGACACTAGTGAGCAGGACTCCCTGCTTAAGGACATTACCCTATTG  147
      |||| ||||||||||||||| ||||||||||  ||||||||| |||| ||
seq2  AAGT-GACACTAGTGAGCAGAACTCCCTGCT--AGGACATTA-CCTA-TG  139

seq1  CACCATGAGGTTGAACAGCATGGTCTCTTCTGCCTGCTCTGTCCTCTCTC  197
      || |||||||||||||||||||||||| |||| |||||||||||||||||
seq2  CA-CATGAGGTTGAACAGCATGGTCTC-TCTG-CTGCTCTGTCCTCTCTC  186

seq1  TGTGGAGAAGCGCTTCAGCTCCCGCACTGCTTCCGTGCCTTGCTGCTCTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGAAGCGCTTCAGCTCCCGCACTGCTTCCGTGCCTTGCTGCTCTG  236

seq1  GTGCCAGG-CCTCTTGTCCTTCCTTGAAGCTGAACTTTCAGACAGGCAGC  296
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGGCCCTCTTGTCCTTCCTTGAAGCTGAACTTTCAGACAGGCAGC  286

seq1  AGCAGCACCCAGAGACACACGGGCTGAGTCCCTAACCTCTTCTGCTCTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCACCCAGAGACACACGGGCTGAGTCCCTAACCTCTTCTGCTCTCA  336

seq1  GTGTGGCCTTCCAGTCCTTTCTGCCCTTCTGTCTTCATGG-CCCAGTCCT  395
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTGTGGCCTTCCAGTCCTTTCTGCCCTTCTGTCTTCATGGCCCCAGTCCT  386

seq1  CTAGAACACACTTTGAGTAGGAATGTTAATCAGGATCACTTGATTTTCGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACACACTTTGAGTAGGAATGTTAATCAGGATCACTTGATTTTCGA  436

seq1  GACCAGGTTACCCCAGGGCTAACCTCTGCCATGTCCTGGCCCTGGCCCTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGTTACCCCAGGGCTAACCTCTGCCATGTCCTGGCCCTGGCCCTG  486

seq1  CCAGCATCAGAGGGAGCCCCTGTCCTTCCTAAACCCTGTGGTTTATTCCC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATCAGAGGGAGCCCCTGTCCTTCCTAAACCCTGTGGTTTATTCCC  536

seq1  TCTTGTGATACAGAAACCCTGCTGAGCCCAGTCTGCCCATTGAGCAATCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGATACAGAAACCCTGCTGAGCCCAGTCTGCCCATTGAGCAATCT  586

seq1  CAATGCTCTGGGAAGTGGGATTTACTCCCAGCAGGAAAGTGACAGAGATT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTCTGGGAAGTGGGATTTACTCCCAGCAGGAAAGTGACAGAGATT  636

seq1  GTCTGTGAGGTCTGGAAAGGGGCCAGTGGAGTGATGACTGGGGAGGGGAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGAGGTCTGGAAAGGGGCCAGTGGAGTGATGACTGGGGAGGGGAT  686

seq1  GGAACCATTGTCACTGGTGTCACCAGTTAGGTTCTGATCCAGGAATGGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCATTGTCACTGGTGTCACCAGTTAGGTTCTGATCCAGGAATGGAA  736

seq1  GCCCAGGAACAGTTATCTTAGAAGATTTGTGTCCTAGATGTGCAGGAGGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGAACAGTTATCTTAGAAGATTTGTGTCCTAGATGTGCAGGAGGA  786

seq1  TGGGACTTGTGTGACCTAAGAGAGAATGTGGACCTCATCATCCTATGAAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTTGTGTGACCTAAGAGAGAATGTGGACCTCATCATCCTATGAAT  836

seq1  AGTCTCAGGGAGAGATGCTACCTGCCTGTGTGGGCTGAGCTGTGTCTGGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAGGGAGAGATGCTACCTGCCTGTGTGGGCTGAGCTGTGTCTGGG  886

seq1  GTCTGTTCATGTCCTCTTGACCTTTCTGGGACAGCTTTGTCATCTGTCTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTCATGTCCTCTTGACCTTTCTGGGACAGCTTTGTCATCTGTCTA  936

seq1  GGTGACTCCCCTATAATCACCTGGTCTCTTCTGGTGAGTGATGGCCAGGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTCCCCTATAATCACCTGGTCTCTTCTGGTGAGTGATGGCCAGGA  986

seq1  GGCAAAGTAATATCCTCAGAGACATGAGAAGAAGACAATTTTAGAGCAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGTAATATCCTCAGAGACATGAGAAGAAGACAATTTTAGAGCAGG  1036

seq1  CTTGTGGGAGATGTCTGTAGATATTGGGACTGTTGGAAACTAGGTGACTT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGGAGATGTCTGTAGATATTGGGACTGTTGGAAACTAGGTGACTT  1086

seq1  AGTTTGCTTTCTATTGCTGTGATAAACACCACGAGCAAAGCAACTAGGGT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCTTTCTATTGCTGTGATAAACACCACGAGCAAAGCAACTAGGGT  1136

seq1  AAGAAGGAATTC  1157
      ||||||||||||
seq2  AAGAAGGAATTC  1148