BAC Information

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BAC

Clone NameB6Ng01-336O06
Chromosome7 (Build37)
Map Location 58,573,560 - 58,713,516
singlet/doubletdoublet
Overlap geneLOC668779
Upstream geneNell1, 4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971
Downstream geneTmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336O06.bB6Ng01-336O06.g
ACCGA121678GA121679
length1,1271,133
definitionB6Ng01-336O06.b B6Ng01-336O06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,712,401 - 58,713,516)(58,573,560 - 58,574,712)
sequence
gaattccttccttatcctggatcttggcctttacattttccatagtgtcc
gagggttcaacctcgagcgtgatggttttccccgtaagggtcttcacaga
gatctgcatcgtggcggtggctccacctgcattcgaaaagagacggatta
gatccgacgacaccagtgagggcgacacgtagggtcactagccagagcgc
ggccacagagcatacactcaccgtaaaccataatttatctaccaaggtat
ttgttatctcacttgagatgtcaaaaattggaaatgatgctggagagatg
gcttacaggttaatagcactggctgctttccagaggactagagttcaatt
cccagcacctatatggtggctcacaactataactccaatcccagcatatc
catttctcccttctggcctcaatgggtactgcactcatgtcatggcaaca
tatacatgaagacaaaacactataaagatagagttttttaaaaattggaa
gtacatatattcaatattttgagaccagagtaagataaaagcatatgaag
atttaaagccatatttttgtgtttaaaataggcaaatgggaaggaaagaa
acagatatactaacctaatattactatatcttcaatataaataatttaaa
aatggggtacagagctaaacaaagaattttcaactgaagaataccaaatg
gctgaggagcatctaaaaaaaaaatgttcaacatccttaatcatcaggga
aatgcaaaccaaaacaaccctgagattccatctcacaccagtcagaatgg
ctaatatcaaaaactcaggtgatacctgatgctggcgaggatgtggagaa
agagaaacaatcctccattgctggtgggattgcagcttgtacaaccactc
tggaaatcagtttggcagttccttagaaaattggacatagtactaccaga
agatccagcaatacactcctgggcatatacccagaagatgccccacatgt
aacaaggacacagctccactatgttcatagcagtcttatttatatagcag
aagctggaagaacccagatgtccctcacagagatgatacagaaagtgtgg
tacatttacacaatggagtactacaca

gaattcagttgttaatagacacagggagccacaagcaaatgtgtgcatct
gggaacatggtctgacaagtatttaaaattgatgctcacaaggctcagca
aagccatttattctctacaggttagagatgctgaggtccaccttcagaca
gacttgacaaggactgaaagctcctaagctccaaataccttgggaagact
attgtcaatcccctttcttacttttataccaccctgcccattgacttgaa
tatggaaaatggttaaaggagaagcagcttcctccagctacacatgggaa
gatgaaatcatcaaggacagggtatggtggccactgaatgaacgaccatg
aagctatagccaatcaggatacctaggatcacaaggaagagtgggtatag
gctcactgagagctctaagtcctgacagtcatgcagtccttgcatttctg
tcttcataagtccccagggtaactgtaagcatcatgtcaattttaatgaa
aaaattagagccattaagtgaataacagcttagcataattcatatttcag
atggttaattaaatattattctatactcctgctcaaggtctcacagcatt
gatttcataagaaaagaccattcttgctttctgtgtccttcgtgcctgct
aatttcacacagtttacagagtcgggtgtggtttcagaagtaaaggtgtt
ttcattaatggctttattttctaaccctctgtgtaaaaaaaaaattcatc
attttaatggtaaacaaaattttaaataacttcatttggaagaaaacact
gatcagtgcttcggattcttccttgtatataactcaccggtgatggggtc
tgaaccgtaggatgaatacttcccaatagtaagaataatctcttcttaca
aaaagagttttcttttcttttcctttcctttctttcttttcttttctttt
cttttttttaaaaaacacattacaaagtctttatcctgggatagatcagg
attaccattatgtggggagaagagtagaggacactgagccaagacttaac
atatattcttcagcacctgactccagatcattgagactagtctcctatag
gatatcatgactgaaatatcactcatctgttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_58712401_58713516
seq2: B6Ng01-336O06.b_69_1173 (reverse)

seq1  TGTGTAGTACTCCATTGTGTAAATGTACCACACTTTCTGTATCCATTCCT  50
      |||||||||||||||||||||||||||||||||||||||||| |||  ||
seq2  TGTGTAGTACTCCATTGTGTAAATGTACCACACTTTCTGTAT-CAT--CT  47

seq1  CTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTTGCTATTATAAATAAG  100
      ||| |||||||||||||||||| |||||||||| ||||| ||||||||||
seq2  CTG-TGAGGGACATCTGGGTTC-TTCCAGCTTC-TGCTA-TATAAATAAG  93

seq1  ACTGCTATGAACATAGTGGAGCTTGTGTCCTTGTTACATGTTGGGGCATC  150
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  ACTGCTATGAACATAGTGGAGC-TGTGTCCTTGTTACATG-TGGGGCATC  141

seq1  TTCTGGGTATATGCCCAGGAGTGGTATTGCTGGATCTTCTGGTAGTACTA  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCTGGGTATATGCCCAGGAGT-GTATTGCTGGATCTTCTGGTAGTACTA  190

seq1  TGTCCAATTTTCTAAGGAACTGCCAAACTGATTTCCAGAGTGGTTGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAATTTTCTAAGGAACTGCCAAACTGATTTCCAGAGTGGTTGTACA  240

seq1  AGCCTGCAATCCCACCAGCAATGGAGGATTGTTTCTCTTTCTCCACATCC  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-CTGCAATCCCACCAGCAATGGAGGATTGTTTCTCTTTCTCCACATCC  289

seq1  TCGCCAGCATCAGGTATCACCTGAGTTTTTGATATTAGCCATTCTGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCAGCATCAGGTATCACCTGAGTTTTTGATATTAGCCATTCTGACTG  339

seq1  GTGTGAGATGGAATCTCAGGGTTGTTTTGGTTTGCATTTCCCTGATGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGATGGAATCTCAGGGTTGTTTTGGTTTGCATTTCCCTGATGATT  389

seq1  AAGGATGTTGAACATTTTTTTTTTAGATGCTCCTCAGCCATTTGGTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGTTGAACATTTTTTTTTTAGATGCTCCTCAGCCATTTGGTATTC  439

seq1  TTCAGTTGAAAATTCTTTGTTTAGCTCTGTACCCCATTTTTAAATTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTGAAAATTCTTTGTTTAGCTCTGTACCCCATTTTTAAATTATTT  489

seq1  ATATTGAAGATATAGTAATATTAGGTTAGTATATCTGTTTCTTTCCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAAGATATAGTAATATTAGGTTAGTATATCTGTTTCTTTCCTTCC  539

seq1  CATTTGCCTATTTTAAACACAAAAATATGGCTTTAAATCTTCATATGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCCTATTTTAAACACAAAAATATGGCTTTAAATCTTCATATGCTT  589

seq1  TTATCTTACTCTGGTCTCAAAATATTGAATATATGTACTTCCAATTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTACTCTGGTCTCAAAATATTGAATATATGTACTTCCAATTTTTA  639

seq1  AAAAACTCTATCTTTATAGTGTTTTGTCTTCATGTATATGTTGCCATGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCTATCTTTATAGTGTTTTGTCTTCATGTATATGTTGCCATGAC  689

seq1  ATGAGTGCAGTACCCATTGAGGCCAGAAGGGAGAAATGGATATGCTGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGCAGTACCCATTGAGGCCAGAAGGGAGAAATGGATATGCTGGGA  739

seq1  TTGGAGTTATAGTTGTGAGCCACCATATAGGTGCTGGGAATTGAACTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTTATAGTTGTGAGCCACCATATAGGTGCTGGGAATTGAACTCTA  789

seq1  GTCCTCTGGAAAGCAGCCAGTGCTATTAACCTGTAAGCCATCTCTCCAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTGGAAAGCAGCCAGTGCTATTAACCTGTAAGCCATCTCTCCAGC  839

seq1  ATCATTTCCAATTTTTGACATCTCAAGTGAGATAACAAATACCTTGGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCCAATTTTTGACATCTCAAGTGAGATAACAAATACCTTGGTAG  889

seq1  ATAAATTATGGTTTACGGTGAGTGTATGCTCTGTGGCCGCGCTCTGGCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTATGGTTTACGGTGAGTGTATGCTCTGTGGCCGCGCTCTGGCTA  939

seq1  GTGACCCTACGTGTCGCCCTCACTGGTGTCGTCGGATCTAATCCGTCTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCTACGTGTCGCCCTCACTGGTGTCGTCGGATCTAATCCGTCTCT  989

seq1  TTTCGAATGCAGGTGGAGCCACCGCCACGATGCAGATCTCTGTGAAGACC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGAATGCAGGTGGAGCCACCGCCACGATGCAGATCTCTGTGAAGACC  1039

seq1  CTTACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCGGACACTATGGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCGGACACTATGGA  1089

seq1  AAATGTAAAGGCCAAG  1116
      ||||||||||||||||
seq2  AAATGTAAAGGCCAAG  1105


seq1: chr7_58573560_58574712
seq2: B6Ng01-336O06.g_68_1200

seq1  GAATTCAGTTGTTAATAGACACAGGGAGCCACAAGCAAATGTGTGCATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGTTAATAGACACAGGGAGCCACAAGCAAATGTGTGCATCT  50

seq1  GGGAACATGGTCTGACAAGTATTTAAAATTGATGCTCACAAGGCTCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACATGGTCTGACAAGTATTTAAAATTGATGCTCACAAGGCTCAGCA  100

seq1  AAGCCATTTATTCTCTACAGGTTAGAGATGCTGAGGTCCACCTTCAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATTTATTCTCTACAGGTTAGAGATGCTGAGGTCCACCTTCAGACA  150

seq1  GACTTGACAAGGACTGAAAGCTCCTAAGCTCCAAATACCTTGGGAAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGACAAGGACTGAAAGCTCCTAAGCTCCAAATACCTTGGGAAGACT  200

seq1  ATTGTCAATCCCCTTTCTTACTTTTATACCACCCTGCCCATTGACTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCAATCCCCTTTCTTACTTTTATACCACCCTGCCCATTGACTTGAA  250

seq1  TATGGAAAATGGTTAAAGGAGAAGCAGCTTCCTCCAGCTACACATGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAAATGGTTAAAGGAGAAGCAGCTTCCTCCAGCTACACATGGGAA  300

seq1  GATGAAATCATCAAGGACAGGGTATGGTGGCCACTGAATGAACGACCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAATCATCAAGGACAGGGTATGGTGGCCACTGAATGAACGACCATG  350

seq1  AAGCTATAGCCAATCAGGATACCTAGGATCACAAGGAAGAGTGGGTATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATAGCCAATCAGGATACCTAGGATCACAAGGAAGAGTGGGTATAG  400

seq1  GCTCACTGAGAGCTCTAAGTCCTGACAGTCATGCAGTCCTTGCATTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTGAGAGCTCTAAGTCCTGACAGTCATGCAGTCCTTGCATTTCTG  450

seq1  TCTTCATAAGTCCCCAGGGTAACTGTAAGCATCATGTCAATTTTAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAAGTCCCCAGGGTAACTGTAAGCATCATGTCAATTTTAATGAA  500

seq1  AAAATTAGAGCCATTAAGTGAATAACAGCTTAGCATAATTCATATTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGAGCCATTAAGTGAATAACAGCTTAGCATAATTCATATTTCAG  550

seq1  ATGGTTAATTAAATATTATTCTATACTCCTGCTCAAGGTCTCACAGCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAATTAAATATTATTCTATACTCCTGCTCAAGGTCTCACAGCATT  600

seq1  GATTTCATAAGAAAAGACCATTCTTGCTTTCTGTGTCCTTCGTGCCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCATAAGAAAAGACCATTCTTGCTTTCTGTGTCCTTCGTGCCTGCT  650

seq1  AATTTCACACAGTTTACAGAGTCGGGTGTGGTTTCAGAAGTAAAGGTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCACACAGTTTACAGAGTCGGGTGTGGTTTCAGAAGTAAAGGTGTT  700

seq1  TTCATTAATGGCTTTATTTTCTAACCCTCTGTGTAAAAAAAAAATTCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAATGGCTTTATTTTCTAACCCTCTGTGTAAAAAAAAAATTCATC  750

seq1  ATTTTAATGGTAAACAAAATTTTAAATAACTTCATTTGGAAGAAAACACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATGGTAAACAAAATTTTAAATAACTTCATTTGGAAGAAAACACT  800

seq1  GATCAGTGCTTCGGATTCTTCCTTGTATATAACTCACCGGTGATGGGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTGCTTCGGATTCTTCCTTGTATATAACTCACCGGTGATGGGGTC  850

seq1  TGAACCGTAGGATGAATACTTCCCAATAGTAAGAATAATCTCTTCTTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCGTAGGATGAATACTTCCCAATAGTAAGAATAATCTCTTCTTACA  900

seq1  AAAAGAGTTTTCTTTTCTTTTCCTTTCCTTTCTTTTCTTTTCTTTTCTTT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAAGAGTTTTCTTTTCTTTTCCTTTCCTTTC-TTTCTTTTCTTTTCTTT  949

seq1  TCTTTTTTTTTAAAAAACACATTTACAAAGTCTTTAATCCTGGGATAAGA  1000
      || |||||||||||||||||| ||||||||||||| |||||||||| |||
seq2  TC-TTTTTTTTAAAAAACACA-TTACAAAGTCTTT-ATCCTGGGAT-AGA  995

seq1  TCAGGAATAACCATTATGT-GGGAGAAGAGTAAGAGGGACACTGAGCAAA  1049
      ||||| || |||||||||| ||||||||||| ||| |||||||||||  |
seq2  TCAGG-ATTACCATTATGTGGGGAGAAGAGT-AGA-GGACACTGAGC-CA  1041

seq1  AGACCTTAAACCATATAT--CTCAGCA-CTGACTCCCAAGATACCATGAG  1096
      ||| |||||  |||||||   |||||| ||||||||  |||| |  ||||
seq2  AGA-CTTAA--CATATATTCTTCAGCACCTGACTCC--AGAT-CATTGAG  1085

seq1  ACCAAAGTTCTCAT-TAGGATTATCATGAAACTGAAAAATATCACTCACT  1145
      || |    |||| | ||||| |||||||  ||||  ||||||||||||  
seq2  ACTA---GTCTCCTATAGGA-TATCATG--ACTG--AAATATCACTCA--  1125

seq1  CCTGTTCT  1153
       |||||||
seq2  TCTGTTCT  1133


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