BAC Information

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BAC

Clone NameB6Ng01-337E23
Chromosome7 (Build37)
Map Location 8,449,408 - 8,584,519
singlet/doubletdoublet
Overlap geneLOC100042703, LOC100041967, LOC100042724
Upstream geneLOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961
Downstream geneLOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337E23.bB6Ng01-337E23.g
ACCGA121978GA121979
length8441,108
definitionB6Ng01-337E23.b B6Ng01-337E23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,449,408 - 8,450,250)(8,583,409 - 8,584,519)
sequence
gaattctgtcaaatgtaaagttggtacatacccaccaaatattgggttat
agtgcatgtgtctagttttagaatcactctcactggttgctctagtgata
tcaggaagtatcatatctactgaacttccctacagtgtccataaaatctt
gcactcattcactttcttcattttctctcagagaactaaactctctaatt
attacaattttattctttattttgctttcatggagatggccctctggtaa
cagccaaaaaatgttgataaggcagttgaatccaccactttgtgtagaaa
aatgagatctaggaagacagggttacacataaaaaccatctaccaaatca
aataatcaatgagaaacacagactaactaaataatcagcaaagatgaaat
cagaacatattttctgatttccagtaagagcacacacataagaaaatact
tacttttttcatctgttcttcaatctactggccaatagtctaaggaggaa
atgttccttttctgctgtcaaataaaaatatattatatccaacaatgatc
agaagcccagggactctctggatgaattgggaatattgggaagaagctga
ggaggagggtgaccagcattctcaacaaacctggacaagcaagatctctc
aggcattgagcctctaaccagagatcatacactagctgatgtgaagcccc
caacaaatatgcagcataagactgcctggtctagcatcagtgggagagac
acacctaaccccagagagacttaagtctccagggattgggaagggctggg
cgttggggaggtagggatatcatcttggagatggggggaggagt
gaattccattaaaccgtagtttgaatatcaaatctttctttgcaacaatg
ccatcttccatgaattttcaatgagtaaaatgtggatgttaatgaagaat
gtgtttcttaaagggacagtgctaatgattatatttccatgaagactgac
ttagggaagtgattgtttttgttaatgcattttagacccatttggtttcc
cataatataatgcgaattgataaatgtgaaatatttagtgtagccgcaaa
cactcaattttctttttgaaaagtcgtttcctagaaagcagcgtaattaa
agcatctgactctcattctgttttccagaattttctgagtccaggacctc
aatcagaactgcacacagagggcaatctctgaaagaaattaggttcatgc
aaatgtcagtagttttacctatcccttccataactacaatatgaatagca
tgttgccatagctacaagcttatttcatttcattttttatttattattac
tcaattttttttacagtctagtggttatccccctcctggtttgcccccct
gactcttcctcatctatcaactcctcccccatatccaagatgatatccct
acctccctaacgcccagcccttcccaatccctggggacttaagtctctct
ggggttaggtgtgtctatcccactgatgctacaccaggcagtcttatgct
gcatatttgttgggggcttcacatcagctagtgtatgatctctggttaga
ggctcaatgtctgagagatcttgcttgtccaggtttgatgagactgcttg
tgtttctatgggttgtcctcctcttctttttgcaactattcccaattcat
ccacaggggcccctggctgatgtccattgttggatataatatatttgtac
ttgacagcagaaaaggaacatttcccttcatagactatcgggccaatagc
ttgaagacagatgaaaaaagtcagtattttttatgtgtgtgctctacttg
aatcagaaaaataatgttctgatttcatctttgctgattatttagtaagg
ttgtgtctcactgaatatttggatttgtagaatgatttctaatgggtaaa
cagcctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8449408_8450250
seq2: B6Ng01-337E23.b_47_890

seq1  GAATTCTGTCAAATGTAAAGTTGGTACATACCCACCAAATATTGGGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCAAATGTAAAGTTGGTACATACCCACCAAATATTGGGTTAT  50

seq1  AGTGCATGTGTCTAGTTTTAGAATCACTCTCACTGGTTGCTCTAGTGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATGTGTCTAGTTTTAGAATCACTCTCACTGGTTGCTCTAGTGATA  100

seq1  TCAGGAAGTATCATATCTACTGAACTTCCCTACAGTGTCCATAAAATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGTATCATATCTACTGAACTTCCCTACAGTGTCCATAAAATCTT  150

seq1  GCACTCATTCACTTTCTTCATTTTCTCTCAGAGAACTAAACTCTCTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCATTCACTTTCTTCATTTTCTCTCAGAGAACTAAACTCTCTAATT  200

seq1  ATTACAATTTTATTCTTTATTTTGCTTTCATGGAGATGGCCCTCTGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATTTTATTCTTTATTTTGCTTTCATGGAGATGGCCCTCTGGTAA  250

seq1  CAGCCAAAAAATGTTGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAAAAATGTTGATAAGGCAGTTGAATCCACCACTTTGTGTAGAAA  300

seq1  AATGAGATCTAGGAAGACAGGGTTACACATAAAAACCATCTACCAAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATCTAGGAAGACAGGGTTACACATAAAAACCATCTACCAAATCA  350

seq1  AATAATCAATGAGAAACACAGACTAACTAAATAATCAGCAAAGATGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAATGAGAAACACAGACTAACTAAATAATCAGCAAAGATGAAAT  400

seq1  CAGAACATATTTTCTGATTTCCAGTAAGAGCACACACATAAGAAAATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACATATTTTCTGATTTCCAGTAAGAGCACACACATAAGAAAATACT  450

seq1  TACTTTTTTCATCTGTTCTTCAATCTACTGGCCAATAGTCTAAGGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTTCATCTGTTCTTCAATCTACTGGCCAATAGTCTAAGGAGGAA  500

seq1  ATGTTCCTTTTCTGCTGTCAAATAAAAATATATTATATCCAACAATGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCTTTTCTGCTGTCAAATAAAAATATATTATATCCAACAATGATC  550

seq1  AGAAGCCCAGGGACTCTCTGGATGAATTGGGAATATTGGGAAGAAGCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCCAGGGACTCTCTGGATGAATTGGGAATATTGGGAAGAAGCTGA  600

seq1  GGAGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGGTGACCAGCATTCTCAACAAACCTGGACAAGCAAGATCTCTC  650

seq1  AGGCATTGAGCCTCTAACCAGAGATCATACACTAGCTGATGTGAAGCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTGAGCCTCTAACCAGAGATCATACACTAGCTGATGTGAAGCCCC  700

seq1  CAACAAATATGCAGCATAAGACTGCCTGGTCTAGCATCAGTGGGAGAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATATGCAGCATAAGACTGCCTGGTCTAGCATCAGTGGGAGAGAC  750

seq1  ACACCTAACCCCAGAGAGACTTAAGTCTCCAGGGATTGGGAAGGGCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTAACCCCAGAGAGACTTAAGTCTCCAGGGATTGGGAAGGGCTGGG  800

seq1  CGTTGGGGAGGTAGGGATATCATCTTGGAGAT-GGGGGAGGAGT  843
      |||||||||||||||||||||||||||||||| |||||||||||
seq2  CGTTGGGGAGGTAGGGATATCATCTTGGAGATGGGGGGAGGAGT  844

seq1: chr7_8583409_8584519
seq2: B6Ng01-337E23.g_66_1173 (reverse)

seq1  ACAGGCTGGGTTACACA-TAGAAACCA-TCTACCAAATCAAATAATCAGT  48
      ||||||| | |||| || |||||| || ||||| ||  |||||| |||||
seq2  ACAGGCT-GTTTACCCATTAGAAATCATTCTACAAATCCAAATATTCAGT  49

seq1  GAGAAACACAAACTTAACTAAATAATCAGCAAAGATGAAATCAGAACAT-  97
      |||  |||||| ||| ||||||||||||||||||||||||||||||||| 
seq2  GAG--ACACAACCTT-ACTAAATAATCAGCAAAGATGAAATCAGAACATT  96

seq1  -ATTTTCTGATTTCAAGTAAGAGCACACACATAAAAAATACTGACTTTTT  146
        |||||||| ||||||| ||||||||||||||||||||||||||  |||
seq2  ATTTTTCTGA-TTCAAGT-AGAGCACACACATAAAAAATACTGAC--TTT  142

seq1  TTTCATCTGTTCTTCAAGCTATTGG-CCGATAGTCTATGAA-GGAAATGT  194
      ||||||||| ||||||||||||||| ||||||||||||||| ||||||||
seq2  TTTCATCTG-TCTTCAAGCTATTGGCCCGATAGTCTATGAAGGGAAATGT  191

seq1  TCCTTTTCTGCTGTCAAGTACAAATATATTATATCCAACAATGGACATCA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCTGCTGTCAAGTACAAATATATTATATCCAACAATGGACATCA  241

seq1  GCCAGGGGCCCCTGTGGATGAATTGGGAATAGTTGCAAAAAGAAGAGGAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGGCCCCTGTGGATGAATTGGGAATAGTTGCAAAAAGAAGAGGAG  291

seq1  GACAACCCATAGAAACACAAGCAGTCTCATCAAACCTGGACAAGCAAGAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCCATAGAAACACAAGCAGTCTCATCAAACCTGGACAAGCAAGAT  341

seq1  CTCTCAGACATTGAGCCTCTAACCAGAGATCATACACTAGCTGATGTGAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGACATTGAGCCTCTAACCAGAGATCATACACTAGCTGATGTGAA  391

seq1  GCCCCCAACAAATATGCAGCATAAGACTGCCTGGTGTAGCATCAGTGGGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCAACAAATATGCAGCATAAGACTGCCTGGTGTAGCATCAGTGGGA  441

seq1  TAGACACACCTAACCCCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACACCTAACCCCAGAGAGACTTAAGTCCCCAGGGATTGGGAAGGG  491

seq1  CTGGGCGTTAGGGAGGTAGGGATATCATCTTGGATATGGGGGAGGAGTTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCGTTAGGGAGGTAGGGATATCATCTTGGATATGGGGGAGGAGTTG  541

seq1  ATAGATGAGGAAGAGTCAGGGGGGCAAACCAGGAGGGGGATAACCACTAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGAGGAAGAGTCAGGGGGGCAAACCAGGAGGGGGATAACCACTAG  591

seq1  ACTGTAAAAAAAATTGAGTAATAATAAATAAAAAATGAAATGAAATAAGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAAAAAAATTGAGTAATAATAAATAAAAAATGAAATGAAATAAGC  641

seq1  TTGTAGCTATGGCAACATGCTATTCATATTGTAGTTATGGAAGGGATAGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCTATGGCAACATGCTATTCATATTGTAGTTATGGAAGGGATAGG  691

seq1  TAAAACTACTGACATTTGCATGAACCTAATTTCTTTCAGAGATTGCCCTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTACTGACATTTGCATGAACCTAATTTCTTTCAGAGATTGCCCTC  741

seq1  TGTGTGCAGTTCTGATTGAGGTCCTGGACTCAGAAAATTCTGGAAAACAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCAGTTCTGATTGAGGTCCTGGACTCAGAAAATTCTGGAAAACAG  791

seq1  AATGAGAGTCAGATGCTTTAATTACGCTGCTTTCTAGGAAACGACTTTTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAGTCAGATGCTTTAATTACGCTGCTTTCTAGGAAACGACTTTTC  841

seq1  AAAAAGAAAATTGAGTGTTTGCGGCTACACTAAATATTTCACATTTATCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAATTGAGTGTTTGCGGCTACACTAAATATTTCACATTTATCA  891

seq1  ATTCGCATTATATTATGGGAAACCAAATGGGTCTAAAATGCATTAACAAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGCATTATATTATGGGAAACCAAATGGGTCTAAAATGCATTAACAAA  941

seq1  AACAATCACTTCCCTAAGTCAGTCTTCATGGAAATATAATCATTAGCACT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCACTTCCCTAAGTCAGTCTTCATGGAAATATAATCATTAGCACT  991

seq1  GTCCCTTTAAGAAACACATTCTTCATTAACATCCACATTTTACTCATTGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTTAAGAAACACATTCTTCATTAACATCCACATTTTACTCATTGA  1041

seq1  AAATTCATGGAAGATGGCATTGTTGCAAAGAAAGATTTGATATTCAAACT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATGGAAGATGGCATTGTTGCAAAGAAAGATTTGATATTCAAACT  1091

seq1  ACGGTTTAATGGAATTC  1111
      |||||||||||||||||
seq2  ACGGTTTAATGGAATTC  1108