BAC Information

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BAC

Clone NameB6Ng01-337L23
Chromosome7 (Build37)
Map Location 8,829,380 - 8,830,519
singlet/doubletsinglet
Overlap geneLOC100042009
Upstream geneVmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998
Downstream geneLOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337L23.bB6Ng01-337L23.g
ACCGA122274GA122275
length9941,117
definitionB6Ng01-337L23.b B6Ng01-337L23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacatggagtagagaacca
ccctcggcatatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacatctccccc
tttccttttaataagagcaaataggccacccatattaatgagagtggaga
tagaggtcaaatccccagtgtgtaggtaaaggagccatgtacaggattag
ctcttaggctcacaggcttttacccagagcaaccctgacctgctcccgtg
tcgttttgcctgggggaagggaactaggacactgaaccttcatgaaagat
gacatgtctccctagaataggctcatatatgccgcagagcctttccattg
cagtgcttagccgtgcaactctctcgggctgctgaagcacactcactcta
tcccgtgcaatgagactagcctcgtgggatataagagctgagtggccagc
gacctattgcctaagcatagataaccatatatcagggggagctccatgtt
ctagtcctgcaagcgcctgggcaataaccaccttgtctctcctagtttgg
gccttaagcttacagaccaatcaaagaagcaacactaatccacagcaaag
tgtatctccaaataatattaatcccacccattttttaaagaaagaaaatg
ctgaggagatccaattgggtaatcctttggtcagggacaggtccaagcgc
gtggagttgacctgaagtctcaattcccgaagggatctgttcaaattcag
ccatccaattctgtaacatatactgaaaaagactttttgacaaattagct
gccctagtaaatttaacatactgaatggaaataacacacaatcccggaaa
cttttgttcacatcccagctgagttatttgtcataatacatcta
gaattcctggacgatgactcacacgtggagataagaagctgtccaggtac
atccagaaatttaaagatacctcccaattgggtcctgtaagcagaaacga
acacatactctcttcattacagaaatagtttgggatagggctttgttttt
tttttttttatgtaataactattttgtaggtattacagttttcccatcac
aacggcccaaagtgtatcttatgatcaaagacatatttggtaaaagatca
ggattcctgttgatttcatccattgaaaagaccaatgccaaagcatattt
gtggtttttagttgtttttctgtaaaagagtacagtgtttattatggaca
gatgattatacatgaatattagtactcaatggaagttctatgctatactg
gaaatttctgcatctgacatctaaagactggaacaaatgactttgttgtg
agattggattgacagaagaacctagaatatagaaagcactttaaaagttc
atgatgttgttggtcccataaataagagatggtattgacctcatccacag
agataatttccatttttgtttttgagcgcttgatcagaaggcaaagagaa
aaccacagatattgacaaaacagtaattttgatcatgtcttcattttgaa
attattgagcaatataaaaaacttgttatttgagccactgagttcacatt
ttcttgtgaaattaactgaatttgtttaggaagtaaaaacatgatttatc
aatgcctaatggtctttctccagcaacacttgattcctgtacttacaatc
acttataattagtggtcaatattcttgacatgtcccctcatatctatact
catcttgttatttttcaatcttaatgggaagaaaatatttagaaagattt
atttttaaataaaatcaaaatcaatatgatttgggtatttatacatgtca
tgattaggtgtatatatttgagcagattatttagatataaatgcatacat
ctaaatgctttataagatacatgctgtagactaccctcagttcaatgcca
ggtatgtagtaatggcaggtattagtgcaagattaggcttgttcccacac
atgtatctctactactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8829380_8830519
seq2: B6Ng01-337L23.g_65_1181 (reverse)

seq1  AAGTAGTAGGAAGATACATTGGTGGTGGGACAAGCCCTTAATCTCTGCAC  50
      |||||||||  ||||||||  |||  || |||||||  |||||| |||||
seq2  AAGTAGTAG--AGATACAT--GTGTGGGAACAAGCC--TAATCT-TGCAC  43

seq1  TAAATACCTTGCACTACTACATACCTGTGCATTTGAACTGAGGGTAGTCT  100
      | |||||||  || ||||||||||||| ||| ||||||||||||||||||
seq2  T-AATACCTGCCATTACTACATACCTG-GCA-TTGAACTGAGGGTAGTCT  90

seq1  ACAGCATGGTATCTTATAAAGCATTTAGATGTATTGCAATTTTATAATCT  150
      ||||||| ||||||||||||||||||||||||| ||||  ||||| ||||
seq2  ACAGCAT-GTATCTTATAAAGCATTTAGATGTA-TGCA--TTTAT-ATCT  135

seq1  AAATAATCCTTGCTCAAATATATACAACCTTAATCATTGACATGTATAAA  200
      ||||||||  ||||||||||||||||  | |||||| |||||||||||||
seq2  AAATAATC--TGCTCAAATATATACA--CCTAATCA-TGACATGTATAAA  180

seq1  TTACCAAATTCATATTTGATTTTTGATTTTATTTAAAAATAAATCTTTCT  250
       |||| || ||||| |||| ||||||||||||||||||||||||||||||
seq2  -TACCCAAATCATA-TTGA-TTTTGATTTTATTTAAAAATAAATCTTTCT  227

seq1  AAATATTTTCTTTCCATTAAGATTGAAAAATAACAAGATGAGTATAGATA  300
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTCTTCCCATTAAGATTGAAAAATAACAAGATGAGTATAGATA  277

seq1  TGAGGGGACATGTCAAGAATATTGACCACTAATTATAAGTGATTGTAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGACATGTCAAGAATATTGACCACTAATTATAAGTGATTGTAAGT  327

seq1  ACAGGAATCAAGTGTTGCTGGAGAAAGACCATTAGGCATTGATAAATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAATCAAGTGTTGCTGGAGAAAGACCATTAGGCATTGATAAATCAT  377

seq1  GTTTTTACTTCCTAAACAAATTCAGTTAATTTCACAAGAAAATGTGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTACTTCCTAAACAAATTCAGTTAATTTCACAAGAAAATGTGAACT  427

seq1  CAGTGGCTCAAATAACAAGTTTTTTATATTGCTCAATAATTTCAAAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCTCAAATAACAAGTTTTTTATATTGCTCAATAATTTCAAAATGA  477

seq1  AGACATGATCAAAATTACTGTTTTGTCAATATCTGTGGTTTTCTCTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGATCAAAATTACTGTTTTGTCAATATCTGTGGTTTTCTCTTTGC  527

seq1  CTTCTGATCAAGCGCTCAAAAACAAAAATGGAAATTATCTCTGTGGATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATCAAGCGCTCAAAAACAAAAATGGAAATTATCTCTGTGGATGA  577

seq1  GGTCAATACCATCTCTTATTTATGGGACCAACAACATCATGAACTTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAATACCATCTCTTATTTATGGGACCAACAACATCATGAACTTTTAA  627

seq1  AGTGCTTTCTATATTCTAGGTTCTTCTGTCAATCCAATCTCACAACAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTCTATATTCTAGGTTCTTCTGTCAATCCAATCTCACAACAAAG  677

seq1  TCATTTGTTCCAGTCTTTAGATGTCAGATGCAGAAATTTCCAGTATAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTTCCAGTCTTTAGATGTCAGATGCAGAAATTTCCAGTATAGCA  727

seq1  TAGAACTTCCATTGAGTACTAATATTCATGTATAATCATCTGTCCATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTTCCATTGAGTACTAATATTCATGTATAATCATCTGTCCATAAT  777

seq1  AAACACTGTACTCTTTTACAGAAAAACAACTAAAAACCACAAATATGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGTACTCTTTTACAGAAAAACAACTAAAAACCACAAATATGCTT  827

seq1  TGGCATTGGTCTTTTCAATGGATGAAATCAACAGGAATCCTGATCTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGGTCTTTTCAATGGATGAAATCAACAGGAATCCTGATCTTTTA  877

seq1  CCAAATATGTCTTTGATCATAAGATACACTTTGGGCCGTTGTGATGGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATATGTCTTTGATCATAAGATACACTTTGGGCCGTTGTGATGGGAA  927

seq1  AACTGTAATACCTACAAAATAGTTATTACATAAAAAAAAAAAAAACAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAATACCTACAAAATAGTTATTACATAAAAAAAAAAAAAACAAAG  977

seq1  CCCTATCCCAAACTATTTCTGTAATGAAGAGAGTATGTGTTCGTTTCTGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATCCCAAACTATTTCTGTAATGAAGAGAGTATGTGTTCGTTTCTGC  1027

seq1  TTACAGGACCCAATTGGGAGGTATCTTTAAATTTCTGGATGTACCTGGAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGACCCAATTGGGAGGTATCTTTAAATTTCTGGATGTACCTGGAC  1077

seq1  AGCTTCTTATCTCCACGTGTGAGTCATCGTCCAGGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTTATCTCCACGTGTGAGTCATCGTCCAGGAATTC  1117