BAC Information

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BAC

Clone NameB6Ng01-339G15
Chromosome7 (Build37)
Map Location 141,911,207 - 141,985,675
singlet/doubletdoublet
Overlap geneDock1
Upstream geneBccip, Dhx32, LOC100043695, Fank1, Adam12, A130023I24Rik, 4933400E14Rik, LOC100043248, LOC100043699, LOC668750
Downstream geneB830028B13Rik, EG668693, LOC100043254, Foxi2, Clrn3, Ptpre, Mki67
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339G15.bB6Ng01-339G15.g
ACCGA123416GA123417
length1,1481,131
definitionB6Ng01-339G15.b B6Ng01-339G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,984,504 - 141,985,675)(141,911,207 - 141,912,349)
sequence
gaattcattaacaatgtattgtgacaggctctttgtgtatgatctacatt
ctattttgtgacccaaggaaaaagagcacaaagacagatcagcataactt
agccatgatcaataactaattattcacaaagctaacaccagatgacaagc
agaaactacagcaccctaaagggagtcacggcgccaagcaatggctagac
agaggccagcattcagcaggtctgctgcaggatgtgtctgctttgggctt
tctacttaatgtggtccacccacacaaaaggcagaaaaacaacagcagag
gatcctctaactgcctggagctttcactgggttcaccatgaaccaaattt
gtttgggccagagctgctattctcattccaagacaaaaaagagcttccta
agtagaacaaagagtatggaatgggactgtaccacagaaaggcagggacg
gagcacgctaagcatcaatatccctatctcccaagtttcatctctttgtt
cttcggaagaataattactcgcaattatccccaaatttaacacagcaact
acattatacttgaaaacacagcagaccattttgaaaggagaaaaagaata
gacctcaaaagtttgttccaactggaaaaaaaaaagagagagagagacag
ttgtcaatcccagctgtgaacacaactgctcctctcccaagtcaatgaac
acactgtaggtaaaagctccgctttgcttctctccccatctctgaaaata
ttctgcttaaagcctctgttagtcaaatattccagacctcggcaaggaaa
ccaggctgctgctgcctcttcaagtaacccattcaaaacaggaatgggct
aagactccaatcaagcccttgaaatcaagataaatgccatggaatgacaa
tgtcataggatattataggcggggaaatgaaacttttggcagagcagctc
gggctggaggcatgagtgttttcagcccctgcatcacagatactaaaaca
cctcacagttttcagctctgatataagagagtattttctcatatctacca
atatggcctaccagtgcacttacactctgaagcacgatgtccatcattct
tcaagatctgtagcagctaaatccagatgcgaaggtattgacaaggac
gaattcacactgactcggaactggtgatcctccaaccgtagagtcctgac
tagctgagattaaaggagtgaccagtcaggcccagttactgtttccatct
gttaagtgggtcaatgggctgaactagatttttcccatgtgagagtagtg
aagtagactcccccacagtgggacttcatgtcatcaggtgctgattctgc
ccccctcaagaagtgacatagctttgtaagtgtggtgatgaatgttgatt
tgataatcctggtttttgttaatgagattttcttagtaaggaatgagaaa
tcacaagtggagtcttttggacttgggtggcccttaggatggcacagtgt
tggtacaacctgtttgtttgtcatgttcaaagctgggtattgtgattttt
ctggtataaacccagatagagagaaatggaaaacatttctctactcacgg
tattaggcagttttaaaaaaaaagaggtaaattagtctgaccacaaaaag
ctgtagctcacaatgcttggttcatggaatgtgcatagtgcctgtcagtc
aactccatcagcatcatcatcatcatcaccattgccatcaccagcagtga
cagtacttgtggtggctcaatattatgtcatcatcaccagcagcatcaac
tctaggaccccccaccctcagtcttaccgacaacattggtgcctggaaga
tcccttcttcctcttgggcttctgagtcaccattcctcctgatataactc
acagctgtttccaagatgatcaggaacctgagccgaggtcatggctttgc
tttcctcatctctgataaacttcgctatctgagagacaggccagagtgct
aacttcatattttgggaagaagatccatacttagtctgggctgttgccag
ttcttaagaatgagtagttataagaaaactcatcactcagaggggagagc
tctatgactggcttgtctcctccatatcatagaggccatgtcacactcta
cactggactccacttcaggaagagagttatgtccctgtgcatggtgcttg
tgatgtcacccatagcctggcagttaaaaaacggtgactggggtcttgaa
agatgctcatgagactagtcttgtggtacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_141984504_141985675
seq2: B6Ng01-339G15.b_46_1193 (reverse)

seq1  GTCCTTGTCAAACCCTTCTGCATTTGTGGGTTTTAGCTGCCTACCAGGAT  50
      |||||||||||  ||||| |||| |   || |||||||| ||||   |||
seq2  GTCCTTGTCAATACCTTC-GCATCT---GGATTTAGCTG-CTAC--AGAT  43

seq1  CTTTGAGGGATGAAAGAACATATGTGCCTTTCAGAGTGTAAAGTGCACTT  100
      | |||| | ||| | | ||||  ||||  |||||||||| ||||||||| 
seq2  C-TTGAAGAATG-ATGGACAT-CGTGC--TTCAGAGTGT-AAGTGCACTG  87

seq1  GTA-GCCATATTGTGTAGATATGAGGAAATACCTCTTCTTTATATCAGAG  149
      ||| ||||||||| ||||||||||| ||||| ||||   |||||||||| 
seq2  GTAGGCCATATTG-GTAGATATGAGAAAATA-CTCT--CTTATATCAGA-  132

seq1  GCTGAAAACTGTGAGGTGTTTTAGTATCTTGTGGATTCCAGGGGCTGAAA  199
      |||||||||||||||||||||||||||| ||||   | ||||||||||||
seq2  GCTGAAAACTGTGAGGTGTTTTAGTATC-TGTG--ATGCAGGGGCTGAAA  179

seq1  ACACTCATGCCCTTCCAGCCCGAGCTGCTTCTGCCAAAAGTTTCATTTCC  249
      |||||||||||  ||||||||||||||| |||||||||||||||||||||
seq2  ACACTCATGCC--TCCAGCCCGAGCTGC-TCTGCCAAAAGTTTCATTTCC  226

seq1  CCGCCTATAATATCCTATGACATTGTCATTCCATGGCATTTATCTTTGAT  299
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCGCCTATAATATCCTATGACATTGTCATTCCATGGCATTTATC-TTGAT  275

seq1  TTCAAGGGCTTGATTGGAGTCTTAGCCCATTCCTGTTTTGAATGGGTTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGGCTTGATTGGAGTCTTAGCCCATTCCTGTTTTGAATGGGTTAC  325

seq1  TTGAAGAGGCAGCAGCAGCCTGGTTTCCTTGCCGAGGTCTGGAATATTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAGGCAGCAGCAGCCTGGTTTCCTTGCCGAGGTCTGGAATATTTG  375

seq1  ACTAACAGAGGCTTTAAGCAGAATATTTTCAGAGATGGGGAGAGAAGCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAGAGGCTTTAAGCAGAATATTTTCAGAGATGGGGAGAGAAGCAA  425

seq1  AGCGGAGCTTTTACCTACAGTGTGTTCATTGACTTGGGAGAGGAGCAGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGAGCTTTTACCTACAGTGTGTTCATTGACTTGGGAGAGGAGCAGTT  475

seq1  GTGTTCACAGCTGGGATTGACAACTGTCTCTCTCTCTCTTTTTTTTTTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCACAGCTGGGATTGACAACTGTCTCTCTCTCTCTTTTTTTTTTCC  525

seq1  AGTTGGAACAAACTTTTGAGGTCTATTCTTTTTCTCCTTTCAAAATGGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGAACAAACTTTTGAGGTCTATTCTTTTTCTCCTTTCAAAATGGTC  575

seq1  TGCTGTGTTTTCAAGTATAATGTAGTTGCTGTGTTAAATTTGGGGATAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTTTTCAAGTATAATGTAGTTGCTGTGTTAAATTTGGGGATAAT  625

seq1  TGCGAGTAATTATTCTTCCGAAGAACAAAGAGATGAAACTTGGGAGATAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGTAATTATTCTTCCGAAGAACAAAGAGATGAAACTTGGGAGATAG  675

seq1  GGATATTGATGCTTAGCGTGCTCCGTCCCTGCCTTTCTGTGGTACAGTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTGATGCTTAGCGTGCTCCGTCCCTGCCTTTCTGTGGTACAGTCC  725

seq1  CATTCCATACTCTTTGTTCTACTTAGGAAGCTCTTTTTTGTCTTGGAATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCATACTCTTTGTTCTACTTAGGAAGCTCTTTTTTGTCTTGGAATG  775

seq1  AGAATAGCAGCTCTGGCCCAAACAAATTTGGTTCATGGTGAACCCAGTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGCAGCTCTGGCCCAAACAAATTTGGTTCATGGTGAACCCAGTGA  825

seq1  AAGCTCCAGGCAGTTAGAGGATCCTCTGCTGTTGTTTTTCTGCCTTTTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCAGGCAGTTAGAGGATCCTCTGCTGTTGTTTTTCTGCCTTTTGT  875

seq1  GTGGGTGGACCACATTAAGTAGAAAGCCCAAAGCAGACACATCCTGCAGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGACCACATTAAGTAGAAAGCCCAAAGCAGACACATCCTGCAGC  925

seq1  AGACCTGCTGAATGCTGGCCTCTGTCTAGCCATTGCTTGGCGCCGTGACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGCTGAATGCTGGCCTCTGTCTAGCCATTGCTTGGCGCCGTGACT  975

seq1  CCCTTTAGGGTGCTGTAGTTTCTGCTTGTCATCTGGTGTTAGCTTTGTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTAGGGTGCTGTAGTTTCTGCTTGTCATCTGGTGTTAGCTTTGTGA  1025

seq1  ATAATTAGTTATTGATCATGGCTAAGTTATGCTGATCTGTCTTTGTGCTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAGTTATTGATCATGGCTAAGTTATGCTGATCTGTCTTTGTGCTC  1075

seq1  TTTTTCCTTGGGTCACAAAATAGAATGTAGATCATACACAAAGAGCCTGT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTTGGGTCACAAAATAGAATGTAGATCATACACAAAGAGCCTGT  1125

seq1  CACAATACATTGTTAATGAATTC  1172
      |||||||||||||||||||||||
seq2  CACAATACATTGTTAATGAATTC  1148

seq1: chr7_141911207_141912349
seq2: B6Ng01-339G15.g_64_1194

seq1  GAATTCACACTGACTCGGAACTGGTGATCCTCCAACCGTAGAGTCCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTGACTCGGAACTGGTGATCCTCCAACCGTAGAGTCCTGAC  50

seq1  TAGCTGAGATTAAAGGAGTGACCAGTCAGGCCCAGTTACTGTTTCCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAGATTAAAGGAGTGACCAGTCAGGCCCAGTTACTGTTTCCATCT  100

seq1  GTTAAGTGGGTCAATGGGCTGAACTAGATTTTTCCCATGTGAGAGTAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTGGGTCAATGGGCTGAACTAGATTTTTCCCATGTGAGAGTAGTG  150

seq1  AAGTAGACTCCCCCACAGTGGGACTTCATGTCATCAGGTGCTGATTCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGACTCCCCCACAGTGGGACTTCATGTCATCAGGTGCTGATTCTGC  200

seq1  CCCCCTCAAGAAGTGACATAGCTTTGTAAGTGTGGTGATGAATGTTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCAAGAAGTGACATAGCTTTGTAAGTGTGGTGATGAATGTTGATT  250

seq1  TGATAATCCTGGTTTTTGTTAATGAGATTTTCTTAGTAAGGAATGAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATCCTGGTTTTTGTTAATGAGATTTTCTTAGTAAGGAATGAGAAA  300

seq1  TCACAAGTGGAGTCTTTTGGACTTGGGTGGCCCTTAGGATGGCACAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGTGGAGTCTTTTGGACTTGGGTGGCCCTTAGGATGGCACAGTGT  350

seq1  TGGTACAACCTGTTTGTTTGTCATGTTCAAAGCTGGGTATTGTGATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACAACCTGTTTGTTTGTCATGTTCAAAGCTGGGTATTGTGATTTTT  400

seq1  CTGGTATAAACCCAGATAGAGAGAAATGGAAAACATTTCTCTACTCACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATAAACCCAGATAGAGAGAAATGGAAAACATTTCTCTACTCACGG  450

seq1  TATTAGGCAGTTTTAAAAAAAAAGAGGTAAATTAGTCTGACCACAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGCAGTTTTAAAAAAAAAGAGGTAAATTAGTCTGACCACAAAAAG  500

seq1  CTGTAGCTCACAATGCTTGGTTCATGGAATGTGCATAGTGCCTGTCAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCTCACAATGCTTGGTTCATGGAATGTGCATAGTGCCTGTCAGTC  550

seq1  AACTCCATCAGCATCATCATCATCATCACCATTGCCATCACCAGCAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCATCAGCATCATCATCATCATCACCATTGCCATCACCAGCAGTGA  600

seq1  CAGTACTTGTGGTGGCTCAATATTATGTCATCATCACCAGCAGCATCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTTGTGGTGGCTCAATATTATGTCATCATCACCAGCAGCATCAAC  650

seq1  TCTAGGACCCCCCACCCTCAGTCTTACCGACAACATTGGTGCCTGGAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGACCCCCCACCCTCAGTCTTACCGACAACATTGGTGCCTGGAAGA  700

seq1  TCCCTTCTTCCTCTTGGGCTTCTGAGTCACCATTCCTCCTGATATAACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTTCCTCTTGGGCTTCTGAGTCACCATTCCTCCTGATATAACTC  750

seq1  ACAGCTGTTTCCAAGATGATCAGGAACCTGAGCCGAGGTCATGGCTTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTTTCCAAGATGATCAGGAACCTGAGCCGAGGTCATGGCTTTGC  800

seq1  TTTCCTCATCTCTGATAAACTTCGCTATCTGAGAGACAGGCCAGAGTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCATCTCTGATAAACTTCGCTATCTGAGAGACAGGCCAGAGTGCT  850

seq1  AACTTCATATTTTGGGAAGAAGATCCATACTTAGTCTGGGCTGTTGCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCATATTTTGGGAAGAAGATCCATACTTAGTCTGGGCTGTTGCCAG  900

seq1  TTCTTAAGAAATGAGTAGTTATAAGAAAACTCACCACTCAGA-GGGAGAG  949
      |||||||| |||||||||||||||||||||||| |||||||| |||||||
seq2  TTCTTAAG-AATGAGTAGTTATAAGAAAACTCATCACTCAGAGGGGAGAG  949

seq1  CTCTATGACTGGCTTGTCTCCTCCATTATCATAGAGGCCATGTCACACTT  999
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  CTCTATGACTGGCTTGTCTCCTCCA-TATCATAGAGGCCATGTCACAC-T  997

seq1  CTACACTGGACTCCACTTTCCAGGAAAGAGAAGTTTATGTCCCTGTGCAT  1049
      ||||||||||||||||||  |||| ||||||   ||||||||||||||| 
seq2  CTACACTGGACTCCACTT--CAGG-AAGAGA--GTTATGTCCCTGTGCA-  1041

seq1  TGGTGCTTGGTGATGTCACCCATAGCTGGGCCAGTAAAAAAAAGGTGAC-  1098
      |||||||| |||||||||||||||||  || |||| |||||| |||||| 
seq2  TGGTGCTT-GTGATGTCACCCATAGCCTGG-CAGTTAAAAAACGGTGACT  1089

seq1  GGGGGCCTGAGAGATGGCTCAGTGAGTATAGTGCTTGTGGTACAA  1143
      |||| | ||| |||| ||||| ||||  |||| ||||||||||||
seq2  GGGGTCTTGAAAGAT-GCTCA-TGAGACTAGT-CTTGTGGTACAA  1131