BAC Information

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BAC

Clone NameB6Ng01-339I04
Chromosome7 (Build37)
Map Location 20,962,705 - 20,963,825
singlet/doubletsinglet
Overlap genenone
Upstream genePpp1r13l, Ercc2, Klc3, Ckm, Mark4, 4933417E01Rik, Bloc1s3, Trappc6a, Nkpd1, BC024868, Gemin7, Zfp296, Sfrs16, Relb, Clptm1, Apoc2, Apoc4, Apoc1, Apoe, Tomm40, Pvrl2, Bcam, Cblc, Bcl3, Ceacam16, Ceacam19, Pvr, 2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523, EG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949
Downstream geneLOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339I04.bB6Ng01-339I04.g
ACCGA123490GA123491
length1,1811,129
definitionB6Ng01-339I04.b B6Ng01-339I04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccactttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaagtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttaaaggtttttccagag
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttca
tccacttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
cctacttgtctgtctctatacgagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttagatcagggatggtgattccaccagtggttcttt
tatccttgagaagagtttttgctatcctaggtttttttgttattccagat
gaatttgcaaattgctccttctaattcattgaagaattgtgttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttatttcttcagagacttgaagtttttatcat
acagatctttcacttccttagttagagtcacgccgaaatattttatatat
ttgtgactaatgaaaagggtgtgtttccctaattttctttctcagcctgt
ttattcttgtgtagagaaaaggccactgacttggtttgagattatttttt
attccagcctactttcaccgagctgttatcaggttagaaatcttggtgaa
attttgggtccacttaattatctatctaatcactctgcaaaaagtgatta
tttgagatttcgctcattatccgcagatgtg
gaattcttatcacaggtctaatattctttggtactatcttgagaatctca
tttgtaataactcatacaaggaaagatatggattgagctatcattaagga
ataaatagctccaactcatttctgctctaggtataataaaaaactaggga
cttagttttgattttcaatgatgaaaagtaaaaattctgattataaatct
aagaattgtatgttctaaacatttattgatatttaagcctgcagcaatat
agtctcaggcacaatgaacttatactttcatgtgggagaattaagatacc
actgtacaatattttcacaaatgaaaataccagcatttagaatgggatat
atgtggaaataggaccaaaagaaagaataacgtatctttaattgctcaga
taccttatgtttgtctaggacaagcacatatccatgatttcatctgtaac
atttatatcggctaattgtcatttacacatatttattagcctaatacata
attatattggaataaccttcctagtcaggaatttgttagagtcatggcat
gttgaaaaaaatgagaagataaaatacagtctttaaagaatgaaaaggtg
ataatggaagatgaagagttagatttgggtgtgtgtagaaggaaaagtcg
acgaggaaatatggagaggaatagctaacattaggttttttgtttttgca
aatatgtacagaaacattgtactctggggcttcctgtaatatgttcacac
acatagttcaaaagagttttaaaaaccagcactatattagttggaccgtt
tcccacatagatacctcaccttggattatgtaaagttctttttcttttat
ttttttgtaattttttcaggtagtaataagttcttgttgggatattttct
tcattttcatttcaaatataccccccccccccggaaaccctctatacaat
cccttctccccctgcttctatgaaggtgttcctctacacacctaccagta
ccacctctcttgccctcagttcacccttacactgggggcatctattgagc
ctccataggaccaagaccactcggcccactgatgcatgaacatgacattc
ctctgccaactttctgccggctgagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_20962705_20963825
seq2: B6Ng01-339I04.g_64_1192

seq1  GAATTCTTATCACAGGTCTAATATTCTTTGGTACTATCTTGAGAATCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCACAGGTCTAATATTCTTTGGTACTATCTTGAGAATCTCA  50

seq1  TTTGTAATAACTCATACAAGGAAAGATATGGATTGAGCTATCATTAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAATAACTCATACAAGGAAAGATATGGATTGAGCTATCATTAAGGA  100

seq1  ATAAATAGCTCCAACTCATTTCTGCTCTAGGTATAATAAAAAACTAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAGCTCCAACTCATTTCTGCTCTAGGTATAATAAAAAACTAGGGA  150

seq1  CTTAGTTTTGATTTTCAATGATGAAAAGTAAAAATTCTGATTATAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTTTGATTTTCAATGATGAAAAGTAAAAATTCTGATTATAAATCT  200

seq1  AAGAATTGTATGTTCTAAACATTTATTGATATTTAAGCCTGCAGCAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGTATGTTCTAAACATTTATTGATATTTAAGCCTGCAGCAATAT  250

seq1  AGTCTCAGGCACAATGAACTTATACTTTCATGTGGGAGAATTAAGATACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAGGCACAATGAACTTATACTTTCATGTGGGAGAATTAAGATACC  300

seq1  ACTGTACAATATTTTCACAAATGAAAATACCAGCATTTAGAATGGGATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACAATATTTTCACAAATGAAAATACCAGCATTTAGAATGGGATAT  350

seq1  ATGTGGAAATAGGACCAAAAGAAAGAATAACGTATCTTTAATTGCTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAAATAGGACCAAAAGAAAGAATAACGTATCTTTAATTGCTCAGA  400

seq1  TACCTTATGTTTGTCTAGGACAAGCACATATCCATGATTTCATCTGTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTATGTTTGTCTAGGACAAGCACATATCCATGATTTCATCTGTAAC  450

seq1  ATTTATATCGGCTAATTGTCATTTACACATATTTATTAGCCTAATACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATCGGCTAATTGTCATTTACACATATTTATTAGCCTAATACATA  500

seq1  ATTATATTGGAATAACCTTCCTAGTCAGGAATTTGTTAGAGTCATGGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTGGAATAACCTTCCTAGTCAGGAATTTGTTAGAGTCATGGCAT  550

seq1  GTTGAAAAAAATGAGAAGATAAAATACAGTCTTTAAAGAATGAAAAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAAAAATGAGAAGATAAAATACAGTCTTTAAAGAATGAAAAGGTG  600

seq1  ATAATGGAAGATGAAGAGTTAGATTTGGGTGTGTGTAGAAGGAAAAGTCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGAAGATGAAGAGTTAGATTTGGGTGTGTGTAGAAGGAAAAGTCG  650

seq1  ACGAGGAAATATGGAGAGGAATAGCTAACATTAGGTTTTTTGTTTTTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGGAAATATGGAGAGGAATAGCTAACATTAGGTTTTTTGTTTTTGCA  700

seq1  AATATGTACAGAAACATTGTACTCTGGGGCTTCCTGTAATATGTTCACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTACAGAAACATTGTACTCTGGGGCTTCCTGTAATATGTTCACAC  750

seq1  ACATAGTTCAAAAGAGTTTTAAAAACCAGCACTATATTAGTTGGACCGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTTCAAAAGAGTTTTAAAAACCAGCACTATATTAGTTGGACCGTT  800

seq1  TCCCACATAGATACCTCACCTTGGATTATGTAAAGTTC-TTTTCTTTTAT  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCCCACATAGATACCTCACCTTGGATTATGTAAAGTTCTTTTTCTTTTAT  850

seq1  TTTTTTGTAATTTTTTCAGGTAGTAATAAGTTCTTGTT-GGATATTTTCT  898
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTTTTGTAATTTTTTCAGGTAGTAATAAGTTCTTGTTGGGATATTTTCT  900

seq1  TCATTTTCATTTCAAATAT-TACCCCCCCCCCGGAAACCCTCTATACAAT  947
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  TCATTTTCATTTCAAATATACCCCCCCCCCCCGGAAACCCTCTATACAAT  950

seq1  CCCTTCTCCCCCTGCTTCTATGAAGGTGTTCCTCTACACACCTACCCAGT  997
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCCTTCTCCCCCTGCTTCTATGAAGGTGTTCCTCTACACACCTA-CCAGT  999

seq1  ACCACCTCTC-TGCCCTCAGTTCACC--TACACT-GGGGCATCTATTGAG  1043
      |||||||||| |||||||||||||||  |||||| |||||||||||||||
seq2  ACCACCTCTCTTGCCCTCAGTTCACCCTTACACTGGGGGCATCTATTGAG  1049

seq1  CCTTCATAGGACCAAGAACCACTCCGCCCACTGATGCATGACAAGGACA-  1092
      ||| |||||||||||| ||||||| ||||||||||||||||  | |||| 
seq2  CCTCCATAGGACCAAG-ACCACTCGGCCCACTGATGCATGAACATGACAT  1098

seq1  TCCTCTG-CAAC-TTCTGCTGCTGGAGCTTC  1121
      ||||||| |||| |||||| |   |||||||
seq2  TCCTCTGCCAACTTTCTGCCGGCTGAGCTTC  1129