BAC Information

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BAC

Clone NameB6Ng01-339I07
Chromosome7 (Build37)
Map Location 137,123,720 - 137,275,442
singlet/doubletdoublet
Overlap geneLOC100043150
Upstream geneLOC210714, LOC100043144, Ppapdc1a, Brwd2
Downstream geneFgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339I07.bB6Ng01-339I07.g
ACCGA123496GA123497
length6131,087
definitionB6Ng01-339I07.b B6Ng01-339I07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,123,720 - 137,124,332)(137,274,349 - 137,275,442)
sequence
gaattctgtgcatgttccctacacattgctattaactttccatcccatct
tctgggaagaaattgcagatagataaaagttccctccatggtctactggc
cagtcctggcaagtctcctgtcactaagggggataatcccagaattcttt
accagacactcctgagagtgactgagagggcacgagccaccctggtcagg
taaagtgacccatagtttatagcagttagtttcactggtcaacctggctg
ggccatactacctactcatttggtcaaacatcatagatgtttctaaggag
atatatttttcatgagagtaatactttcatcaatagacttctaatgaaaa
ttattctccacagtgttgatgggcttcatccaaaaaagtcaagacactaa
taataagaagaatgacccctggaagataagaattctgccagcagatggcc
ttatgcttaaagtgaaacatcatcccctgcctggtcctcctgccaaggtc
cagctggcctgtcctccttcaagtttggccttgccagctaccaattcctt
tcaaatctaataattggtcagtcagccaatctcctgtctgtctgtctctc
ctgtccgtgtgtg
gaattctgaccatcaggtctatgaaacaagtcccttaatccactgaatca
tcttgctggccatatttaattttcaaaacagccatcaacagaacaacagc
agaaggcaggcagagtgtgtgtgcatgtaattggagcatttaggaagcta
aggcaggaatattagcctgggctacatagcaagaatctatctgagaagaa
atggggatcaggcaaaagatgtcttagctgtaagacatgccttactgata
atcgagtccttgagttataggtgttagaggctctggccaaggacaagtgt
ggccttatagagaaggtgaagtctaaaccatgggctccagaaccacaatc
tgtttctagaattttccatttaccctaaacagaaacccctgttctcattg
aatggctacttctcatttctgcttctagtctcttgcagaagccattctac
acccagtctctatggatttgcttgtcctgggcatcttaaaagtgctgtca
ctcaatgtctgtcttttacctcttacttcaagtttcctccatgctgtggg
gtgtataagtcccaacctcatacagaaaaggaagcgcccccccccccccc
ccgccatcacaatggaggctctgtgttgtcatgaagaaggcatggactcc
agaaacctgtaggcctcttttcagtgctgggcttaaggttctacagtctg
agaatgctgggctgtttgagcgttacccgtgacaaatgacagaaaaaaaa
aaaaaaaagctgaaatagatatttctgggatagtttgcaattctggtgtt
tccaaaattcatttagccaccaaagaaatatctatcaggccttttagagc
ccaatttcaaactcccactcagagcatggagtattgaggcttgaagatct
acactttgatctgagtaaggtggtttaaattcacgcttgtgatcatagaa
gtgaatctctcactcagtctaatccacagaatgagcttgcttgatgctag
accggtccctctcccctcctcatctgtaaggaagagcacagaccactgca
atttagaacactgcaatatgaacattgccacataaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_137123720_137124332
seq2: B6Ng01-339I07.b_47_659

seq1  GAATTCTGTGCATGTTCCCTACACATTGCTATTAACTTTCCATCCCATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCATGTTCCCTACACATTGCTATTAACTTTCCATCCCATCT  50

seq1  TCTGGGAAGAAATTGCAGATAGATAAAAGTTCCCTCCATGGTCTACTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAAGAAATTGCAGATAGATAAAAGTTCCCTCCATGGTCTACTGGC  100

seq1  CAGTCCTGGCAAGTCTCCTGTCACTAAGGGGGATAATCCCAGAATTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTGGCAAGTCTCCTGTCACTAAGGGGGATAATCCCAGAATTCTTT  150

seq1  ACCAGACACTCCTGAGAGTGACTGAGAGGGCACGAGCCACCCTGGTCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACACTCCTGAGAGTGACTGAGAGGGCACGAGCCACCCTGGTCAGG  200

seq1  TAAAGTGACCCATAGTTTATAGCAGTTAGTTTCACTGGTCAACCTGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGACCCATAGTTTATAGCAGTTAGTTTCACTGGTCAACCTGGCTG  250

seq1  GGCCATACTACCTACTCATTTGGTCAAACATCATAGATGTTTCTAAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATACTACCTACTCATTTGGTCAAACATCATAGATGTTTCTAAGGAG  300

seq1  ATATATTTTTCATGAGAGTAATACTTTCATCAATAGACTTCTAATGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTTCATGAGAGTAATACTTTCATCAATAGACTTCTAATGAAAA  350

seq1  TTATTCTCCACAGTGTTGATGGGCTTCATCCAAAAAAGTCAAGACACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTCCACAGTGTTGATGGGCTTCATCCAAAAAAGTCAAGACACTAA  400

seq1  TAATAAGAAGAATGACCCCTGGAAGATAAGAATTCTGCCAGCAGATGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGAAGAATGACCCCTGGAAGATAAGAATTCTGCCAGCAGATGGCC  450

seq1  TTATGCTTAAAGTGAAACATCATCCCCTGCCTGGTCCTCCTGCCAAGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTTAAAGTGAAACATCATCCCCTGCCTGGTCCTCCTGCCAAGGTC  500

seq1  CAGCTGGCCTGTCCTCCTTCAAGTTTGGCCTTGCCAGCTACCAATTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGCCTGTCCTCCTTCAAGTTTGGCCTTGCCAGCTACCAATTCCTT  550

seq1  TCAAATCTAATAATTGGTCAGTCAGCCAATCTCCTGTCTGTCTGTCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTAATAATTGGTCAGTCAGCCAATCTCCTGTCTGTCTGTCTCTC  600

seq1  CTGTCCGTGTGTG  613
      |||||||||||||
seq2  CTGTCCGTGTGTG  613

seq1: chr7_137274349_137275442
seq2: B6Ng01-339I07.g_64_1150 (reverse)

seq1  TGTTATGT-GCCATGGTCATTATTGCAAGTGTTTCTTAAAATGCAGTTGT  49
      |||||||| || ||| ||| |||||| ||||||   |||| |||||| ||
seq2  TGTTATGTGGCAATGTTCA-TATTGC-AGTGTT--CTAAATTGCAGTGGT  46

seq1  CTGTGCTCTTTCTTTACAGATGAGGAAGGGGAGAGGGA-CGGTCTAGCAT  98
      |||||||| ||| |||||||||||| |||||||||||| |||||||||||
seq2  CTGTGCTC-TTCCTTACAGATGAGG-AGGGGAGAGGGACCGGTCTAGCAT  94

seq1  CCAGCAAGCTCCATCTGTGGATTAGACCCTGAGTGAGAGATTCACTTCTA  148
      | |||||||||  |||||||||||||  ||||||||||||||||||||||
seq2  CAAGCAAGCTCATTCTGTGGATTAGA--CTGAGTGAGAGATTCACTTCTA  142

seq1  TGATCACAAGCGTGAATTTAAACCACCCTTACTCAGATCAAAGTGTAGAT  198
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGATCACAAGCGTGAATTTAAACCA-CCTTACTCAGATCAAAGTGTAGAT  191

seq1  CTTCAAGCCTCAATACTCCATGCTCTGAGTGGGAGTTTGAAATTGGGCTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGCCTCAATACTCCATGCTCTGAGTGGGAGTTTGAAATTGGGCTC  241

seq1  TAAAAGGCCTGATAGATATTTCTTTGGTGGCTAAATGAATTTTGGAAACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGCCTGATAGATATTTCTTTGGTGGCTAAATGAATTTTGGAAACA  291

seq1  CCAGAATTGCAAACTATCCCAGAAATATCTATTTCAGCTTTTTTTTTTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATTGCAAACTATCCCAGAAATATCTATTTCAGCTTTTTTTTTTTT  341

seq1  TTTTCTGTCATTTGTCACGGGTAACGCTCAAACAGCCCAGCATTCTCAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTCATTTGTCACGGGTAACGCTCAAACAGCCCAGCATTCTCAGA  391

seq1  CTGTAGAACCTTAAGCCCAGCACTGAAAAGAGGCCTACAGGTTTCTGGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAACCTTAAGCCCAGCACTGAAAAGAGGCCTACAGGTTTCTGGAG  441

seq1  TCCATGCCTTCTTCATGACAACACAGAGCCTCCATTGTGATGGCGGGGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCCTTCTTCATGACAACACAGAGCCTCCATTGTGATGGCGGGGGG  491

seq1  GGGGGGGGGGCGCTTCCTTTTCTGTATGAGGTTGGGACTTATACACCCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGGCGCTTCCTTTTCTGTATGAGGTTGGGACTTATACACCCCA  541

seq1  CAGCATGGAGGAAACTTGAAGTAAGAGGTAAAAGACAGACATTGAGTGAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGAGGAAACTTGAAGTAAGAGGTAAAAGACAGACATTGAGTGAC  591

seq1  AGCACTTTTAAGATGCCCAGGACAAGCAAATCCATAGAGACTGGGTGTAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTTTAAGATGCCCAGGACAAGCAAATCCATAGAGACTGGGTGTAG  641

seq1  AATGGCTTCTGCAAGAGACTAGAAGCAGAAATGAGAAGTAGCCATTCAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTCTGCAAGAGACTAGAAGCAGAAATGAGAAGTAGCCATTCAAT  691

seq1  GAGAACAGGGGTTTCTGTTTAGGGTAAATGGAAAATTCTAGAAACAGATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGGGGTTTCTGTTTAGGGTAAATGGAAAATTCTAGAAACAGATT  741

seq1  GTGGTTCTGGAGCCCATGGTTTAGACTTCACCTTCTCTATAAGGCCACAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCTGGAGCCCATGGTTTAGACTTCACCTTCTCTATAAGGCCACAC  791

seq1  TTGTCCTTGGCCAGAGCCTCTAACACCTATAACTCAAGGACTCGATTATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTTGGCCAGAGCCTCTAACACCTATAACTCAAGGACTCGATTATC  841

seq1  AGTAAGGCATGTCTTACAGCTAAGACATCTTTTGCCTGATCCCCATTTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGCATGTCTTACAGCTAAGACATCTTTTGCCTGATCCCCATTTCT  891

seq1  TCTCAGATAGATTCTTGCTATGTAGCCCAGGCTAATATTCCTGCCTTAGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGATAGATTCTTGCTATGTAGCCCAGGCTAATATTCCTGCCTTAGC  941

seq1  TTCCTAAATGCTCCAATTACATGCACACACACTCTGCCTGCCTTCTGCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAATGCTCCAATTACATGCACACACACTCTGCCTGCCTTCTGCTG  991

seq1  TTGTTCTGTTGATGGCTGTTTTGAAAATTAAATATGGCCAGCAAGATGAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGTTGATGGCTGTTTTGAAAATTAAATATGGCCAGCAAGATGAT  1041

seq1  TCAGTGGATTAAGGGACTTGTTTCATAGACCTGATGGTCAGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGATTAAGGGACTTGTTTCATAGACCTGATGGTCAGAATTC  1087