BAC Information

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BAC

Clone NameB6Ng01-339J07
Chromosome7 (Build37)
Map Location 9,271,539 - 9,272,058
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781
Downstream geneLOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339J07.bB6Ng01-339J07.g
ACCGA123539GA123540
length954184
definitionB6Ng01-339J07.b B6Ng01-339J07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcacgaatttattttttttttttacttttttattatttttaat
actttttattaggtattttcctcatttacatttccaatgctatcacaaac
gtcccccataccctccctcccactcccctacccacccactcccacttttt
gaccctggcgttcccctgtactggggcatataatgtttgcaagtccaatg
ggcctctctttccagtgatggccgaatatgccatctattgatacatatgc
agctagagtcaagagctccaaggcactggttagttcataatgttgttcta
cctatagggatgcagatccatttagctccttgggtactttctctagctcc
tccattggggaccctgtgatccatccaatagctgactgtgagaacccact
tctgtttttgctaggccccggcatagtctcacaagagacagctatatctg
ggtcctttcagcaaaatcttgctagtatatgacatggtgtcagcgtttgg
aaattgattatgagatgaaaccctggatatggcatgctctagatattcca
tccttttgacacagatccaaactttgtctctgtatctccttccttggtgt
tttgttcccaattctaaggaggggcaaagtgtccacactttggtcttcgt
ctttcttgagtttcatgcatttaggaaattgtattatatatcttgggtat
tctaagtttctgggataatatccacttagagtgagtacatattgtgtgag
ttcctttgtgtttgggttacctcactcaggacggtaccctccaggtccat
ccatctgcctagaaatttcataaattcattctttttaaaagctgagtagt
actccattgtgtaaatttaccacattttctgtatccattcctctgttgag
gggcatctgggttctttccacttctggctattataaataagctgctatga
acat
ggacatgggtcctcactcccccctcttttcccaggcccccttttagttcc
tataaggtggtgtgggggatgggggttcaacgtgaagagtttgggttggg
gagaaggtgtgggatgggaaattcagtcggtgtttgggtttatgtgtctg
ttaaagaattttttagttatatttcttactcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9271539_9272058
seq2: B6Ng01-339J07.b_45_567

seq1  GAATTCTTCACGAATTTA---TTTTTTTTTACTTTTTTATTATTTTTAAT  47
      ||||||||||||||||||   |||||||||||||||||||||||||||||
seq2  GAATTCTTCACGAATTTATTTTTTTTTTTTACTTTTTTATTATTTTTAAT  50

seq1  ACTTTTTATTAGGTATTTTCCTCATTTACATTTCCAATGCTATCACAAAC  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTATTAGGTATTTTCCTCATTTACATTTCCAATGCTATCACAAAC  100

seq1  GTCCCCCATACCCTCCCTCCCACTCCCCTACCCACCCACTCCCACTTTTT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCCATACCCTCCCTCCCACTCCCCTACCCACCCACTCCCACTTTTT  150

seq1  GACCCTGGCGTTCCCCTGTACTGGGGCATATAATGTTTGCAAGTCCAATG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGGCGTTCCCCTGTACTGGGGCATATAATGTTTGCAAGTCCAATG  200

seq1  GGCCTCTCTTTCCAGTGATGGCCGAATATGCCATCTATTGATACATATGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTCTTTCCAGTGATGGCCGAATATGCCATCTATTGATACATATGC  250

seq1  AGCTAGAGTCAAGAGCTCCAAGGCACTGGTTAGTTCATAATGTTGTTCTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGTCAAGAGCTCCAAGGCACTGGTTAGTTCATAATGTTGTTCTA  300

seq1  CCTATAGGGATGCAGATCCATTTAGCTCCTTGGGTACTTTCTCTAGCTCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGGGATGCAGATCCATTTAGCTCCTTGGGTACTTTCTCTAGCTCC  350

seq1  TCCATTGGGGACCCTGTGATCCATCCAATAGCTGACTGTGAGAACCCACT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGGGACCCTGTGATCCATCCAATAGCTGACTGTGAGAACCCACT  400

seq1  TCTGTTTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTATATCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTATATCTG  450

seq1  GGTCCTTTCAGCAAAATCTTGCTAGTATATGACATGGTGTCAGCGTTTGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTTCAGCAAAATCTTGCTAGTATATGACATGGTGTCAGCGTTTGG  500

seq1  AAATTGATTATGAGATGAAACCC  520
      |||||||||||||||||||||||
seq2  AAATTGATTATGAGATGAAACCC  523