BAC Information

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BAC

Clone NameB6Ng01-340C04
Chromosome7 (Build37)
Map Location 92,200,621 - 92,201,702
singlet/doubletsinglet
Overlap geneLOC620641
Upstream gene9930013L23Rik, 2210412D01Rik, Arnt2, LOC100039239, Fah, Zfand6, 2610206C17Rik, EG620480, Olfr291, LOC666276, Olfr290, ENSMUSG00000070600, F830104D24Rik
Downstream geneEG620672, Vmn2r-ps68, EG620697, Vmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928, EG546980, LOC666382, LOC637652, LOC637667
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340C04.bB6Ng01-340C04.g
ACCGA123931GA123932
length1,2321,107
definitionB6Ng01-340C04.b B6Ng01-340C04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttccacctccttagttagagtcacgccaagatatttatattat
ttgtgactattgagaaggtgttgtttccctaatttctttctcagcctgtt
tattctttgtatagagaaggccattgacttgtttgagtttattttatatc
agctacttcaccgaagctgtttatcagttaggagttctcctggtagaatt
ttaggtcacttatattatactattcatatcatctgcaaatgtaattttgg
actcctcttctccaattgaatcctgaattccgtttgtgtgccatgtcctg
gccaatacatctcaagcacacaatagttgcag
gaattccccatggtgcttggtgcaacttgtcccaaaaccgggaaccgtat
tgtctcaatctgagaacttaaattgtcccacttacctgggaaccttacca
gctagctgccctgactgtgatgagttctgaacgtctcccagtatgggcca
ccatttgtcgcctcctattccgaccagcagaaaagagagacaacactatg
ttcttctcaaagcagtttattcaggaacctttcaatatcatgcatgaatc
tctctccagaaatcagtctctcaaggaaaaaacaacaacagccaacccac
ccccaatcgcaatcccttatatatcctctcaaccatgccccatcagccca
gtccaggtaacagcagtccattggccagaatcatcactcgtcatatggtc
ggatcttgtatcatggtgcacctgcgcagttctcaagatgatcgtggctt
attttcaggtgtgtgaggaagtcaggcacaagtcataagacttagctaca
gtcccggacaccatcttgggactgctaccacacccgctcctcacacacat
atttgtttcatgtataatttttctcataaaattcttaaatagcaataaga
aaatgatttgtcttttatgttattcaaaagttcctaatcagtttactaaa
tagatcctaaagaatatcaagtacttttccattaattttacttactaata
ctttgtattcctttgtctgtaataaaataacaatactggcagaaaaaaac
atagagaatgcgttgttactctccaatcctaaaaatcagaagattaggtt
ttaaagcaccaagtccagaatgaaaattgtattagtaagcaaagtagaac
taactttacatcgacatgaaattcatttttgagtttagttctgaatattt
ctcataagctagattttttgaaaagggtaatttagacattctaaatgtat
actttctatctaatctggagcctagttgagctaaatgacaatgtgtttta
gatgttctctattctgaagacattacattgtagttctgctgagactagtc
acatgacaaaattgaacagatacaagtatgacattttcttattcatgaat
tttcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_92200621_92201702
seq2: B6Ng01-340C04.g_112_1173

seq1  CGTATTGTCTCAATCTGAGAACTTAAATTGTCCCACTTACCTGGGAACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATTGTCTCAATCTGAGAACTTAAATTGTCCCACTTACCTGGGAACCT  50

seq1  TACCAGCTAGCTGCCCTGACTGTGATGAGTTCTGAACGTCTCCCAGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCTAGCTGCCCTGACTGTGATGAGTTCTGAACGTCTCCCAGTATG  100

seq1  GGCCACCATTTGTCGCCTCCTATTCCGACCAGCAGAAAAGAGAGACAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCATTTGTCGCCTCCTATTCCGACCAGCAGAAAAGAGAGACAACA  150

seq1  CTATGTTCTTCTCAAAGCAGTTTATTCAGGAACCTTTCAATATCATGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTCTTCTCAAAGCAGTTTATTCAGGAACCTTTCAATATCATGCAT  200

seq1  GAATCTCTCTCCAGAAATCAGTCTCTCAAGGAAAAAACAACAACAGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCTCTCCAGAAATCAGTCTCTCAAGGAAAAAACAACAACAGCCAA  250

seq1  CCCACCCCCAATCGCAATCCCTTATATATCCTCTCAACCATGCCCCATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCAATCGCAATCCCTTATATATCCTCTCAACCATGCCCCATCA  300

seq1  GCCCAGTCCAGGTAACAGCAGTCCATTGGCCAGAATCATCACTCGTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTCCAGGTAACAGCAGTCCATTGGCCAGAATCATCACTCGTCATA  350

seq1  TGGTCGGATCTTGTATCATGGTGCACCTGCGCAGTTCTCAAGATGATCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCGGATCTTGTATCATGGTGCACCTGCGCAGTTCTCAAGATGATCGT  400

seq1  GGCTTATTTTCAGGTGTGTGAGGAAGTCAGGCACAAGTCATAAGACTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATTTTCAGGTGTGTGAGGAAGTCAGGCACAAGTCATAAGACTTAG  450

seq1  CTACAGTCCCGGACACCATCTTGGGACTGCTACCACACCCGCTCCTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTCCCGGACACCATCTTGGGACTGCTACCACACCCGCTCCTCACA  500

seq1  CACATATTTGTTTCATGTATAATTTTTCTCATAAAATTCTTAAATAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATTTGTTTCATGTATAATTTTTCTCATAAAATTCTTAAATAGCAA  550

seq1  TAAGAAAATGATTTGTCTTTTATGTTATTCAAAAGTTCCTAATCAGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAATGATTTGTCTTTTATGTTATTCAAAAGTTCCTAATCAGTTTA  600

seq1  CTAAATAGATCCTAAAGAATATCAAGTACTTTTCCATTAATTTTACTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAGATCCTAAAGAATATCAAGTACTTTTCCATTAATTTTACTTAC  650

seq1  TAATACTTTGTATTCCTTTGTCTGTAATAAAATAACAATACTGGCAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTTGTATTCCTTTGTCTGTAATAAAATAACAATACTGGCAGAAA  700

seq1  AAAACATAGAGAATGCGTTGTTACTCTCCAATCCTAAAAATCAGAAGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATAGAGAATGCGTTGTTACTCTCCAATCCTAAAAATCAGAAGATT  750

seq1  AGGTTTTAAAGCACCAAGTCCAGAATGAAAATTGTATTAGTAAGCAAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTAAAGCACCAAGTCCAGAATGAAAATTGTATTAGTAAGCAAAGT  800

seq1  AGAACTAACTTTACATCGACATGAAATTCATTTTTGAGTTTAGTTCTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAACTTTACATCGACATGAAATTCATTTTTGAGTTTAGTTCTGAA  850

seq1  TATTTCTCATAAAGCTAGATTTTTTGAAAAGGGTAATTTAGAACATTCTA  900
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  TATTTCTCAT-AAGCTAGATTTTTTGAAAAGGGTAATTTAG-ACATTCTA  898

seq1  AATGTAATACTTTCTATTCTAATCTGGAAGCCTAGTTGAAGCTAAAATGA  950
      ||||| |||||||||| |||||||||| |||||||||| |||| ||||||
seq2  AATGT-ATACTTTCTA-TCTAATCTGG-AGCCTAGTTG-AGCT-AAATGA  943

seq1  CAAATGTGTTTTAGATGTTCTCTATTCTGAAGACATTACAATTTGTAAGT  1000
      | ||||||||||||||||||||||||||||||||||||||  |||| |||
seq2  C-AATGTGTTTTAGATGTTCTCTATTCTGAAGACATTACA--TTGT-AGT  989

seq1  TCTGCTGGAGACCTAGTCAACATGAACCAAAATTTGAAACAGGATACAAA  1050
      |||||| |||| |||||| ||||||  |||||||   |||| ||||| ||
seq2  TCTGCT-GAGA-CTAGTC-ACATGA--CAAAATT--GAACA-GATAC-AA  1030

seq1  GTATGACATTTTCTATATCATGGATTTTCAAA  1082
      ||||||||||||||   ||||| |||||||||
seq2  GTATGACATTTTCTTATTCATGAATTTTCAAA  1062