BAC Information

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BAC

Clone NameB6Ng01-341A23
Chromosome7 (Build37)
Map Location 135,546,750 - 135,547,798
singlet/doubletsinglet
Overlap geneRgs10
Upstream geneZfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781
Downstream geneLOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144, Ppapdc1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341A23.bB6Ng01-341A23.g
ACCGA124562GA124563
length1,053451
definitionB6Ng01-341A23.b B6Ng01-341A23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcttcagaaactcctgtagataaaaagggggagagggagtca
tactgtgttcaacactgagacaagatacgtttcctttagaagatgacttg
gcgaaagtggacggaggagcctggattagtcagcccttgaaaaaaaactc
cacccggaaaaacaaagaacgtgtttaatgttgaagcaagtatttcttac
gcatttcaccttaatggttttgacattgcaagacacaataaaaatgaagc
gggaatctacttgcatttctgagctgacaataaattaccaaaaagtaaat
taaagtggaagatatatcagccccttccagacactgtttaaacaaagtgc
attcctccaaagccaggcccccccctttttttttaaacaaaagaaaagaa
aacatattaagtcctgtccaaatcatggtgatggagaccattttaagttg
gaggtgtgctttcctgggactgctggttgaggagtcagcacatggtcagc
tctacagctgcgttcaaacctcactggcatccagacaatgctcacagctc
tacttcccaccctggggtctccatgaggaccggcagcaccttgccctatc
acttaaaaagccaggttgcagggtcagtatggggttcacgtgtgacccgc
catgggcagcaggacttatgctggcaggaaaagccatttcttggtggcat
taactcgttcctgtccatcagctctcctttgggcttccccggcttcactc
tgtcagttaccatccaacctctctcaccagtgatacgttcaaagagactc
tgagaccggaaagaacaaaccttttaccccaaagtcccagatcatccttg
ccagcactgaaacccctccctctaaaccccattttgggtaaggcatcccc
cccatcacccttatctcctctccactactacagggaaaacagagataagc
ctccaatgtcccttagtggggagtccagacgccatgaacagatgaatggt
tcttagtctgtagccaggtatagtcagtataaacactggccctggtcccc
aca
agcttggggctcttcagtcagcacacttgcatgttctgatgtctcaggtc
cccctcttccttttcatcctcatttggcggggcggggcagggtgtgtgtg
tgcgcgcgcgcgtgcgtgaagcacaactccacatagggagggagggagag
ggtgtctatggtcttttccaagctctttcaaatttacaacctgtttttca
ttgttattgcatgcacacatgtatatgcatatacagacgcattgttatat
ataacctgactagtctgtatattaatggataaccaattggtgtgctctcc
cctcccctgctcagcactccttagttgtaggttctaagccttgtgggctt
ctccctagccactttgccatgtttatttagtgttgtctgcgttcagctca
tgtctaggcagtcatgttggtgagaatttacagatatagcttctgacatt
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135546750_135547798
seq2: B6Ng01-341A23.b_46_1098

seq1  GAATTCCTTCTTCAGAAACTCCTGTAGATAAAAAGGGGGAGAGGGAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTTCAGAAACTCCTGTAGATAAAAAGGGGGAGAGGGAGTCA  50

seq1  TACTGTGTTCAACACTGAGACAAGATACGTTTCCTTTAGAAGATGACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGTTCAACACTGAGACAAGATACGTTTCCTTTAGAAGATGACTTG  100

seq1  GCGAAAGTGGACGGAGGAGCCTGGATTAGTCAGCCCTTGAAAAAAAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAAGTGGACGGAGGAGCCTGGATTAGTCAGCCCTTGAAAAAAAACTC  150

seq1  CACCCGGAAAAACAAAGAACGTGTTTAATGTTGAAGCAAGTATTTCTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCGGAAAAACAAAGAACGTGTTTAATGTTGAAGCAAGTATTTCTTAC  200

seq1  GCATTTCACCTTAATGGTTTTGACATTGCAAGACACAATAAAAATGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCACCTTAATGGTTTTGACATTGCAAGACACAATAAAAATGAAGC  250

seq1  GGGAATCTACTTGCATTTCTGAGCTGACAATAAATTACCAAAAAGTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATCTACTTGCATTTCTGAGCTGACAATAAATTACCAAAAAGTAAAT  300

seq1  TAAAGTGGAAGATATATCAGCCCCTTCCAGACACTGTTTAAACAAAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGGAAGATATATCAGCCCCTTCCAGACACTGTTTAAACAAAGTGC  350

seq1  ATTCCTCCAAAGCCAGGCCCCCCCCTTTTTTTTTAAACAAAAGAAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCCAAAGCCAGGCCCCCCCCTTTTTTTTTAAACAAAAGAAAAGAA  400

seq1  AACATATTAAGTCCTGTCCAAATCATGGTGATGGAGACCATTTTAAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTAAGTCCTGTCCAAATCATGGTGATGGAGACCATTTTAAGTTG  450

seq1  GAGGTGTGCTTTCCTGGGACTGCTGGTTGAGGAGTCAGCACATGGTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTGCTTTCCTGGGACTGCTGGTTGAGGAGTCAGCACATGGTCAGC  500

seq1  TCTACAGCTGCGTTCAAACCTCACTGGCATCCAGACAATGCTCACAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGCTGCGTTCAAACCTCACTGGCATCCAGACAATGCTCACAGCTC  550

seq1  TACTTCCCACCCTGGGGTCTCCATGAGGACCGGCAGCACCTTGCCCTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCCACCCTGGGGTCTCCATGAGGACCGGCAGCACCTTGCCCTATC  600

seq1  ACTTAAAAAGCCAGGTTGCAGGGTCAGTATGGGGTTCACGTGTGACCCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAAAGCCAGGTTGCAGGGTCAGTATGGGGTTCACGTGTGACCCGC  650

seq1  CATGGGCAGCAGGACTTATGCTGGCAGGAAAAGCCATTTCTTGGTGGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCAGCAGGACTTATGCTGGCAGGAAAAGCCATTTCTTGGTGGCAT  700

seq1  TAACTCGTTCCTGTCCATCAGCTCTCCTTTGGGCTTCCCCGGCTTCACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCGTTCCTGTCCATCAGCTCTCCTTTGGGCTTCCCCGGCTTCACTC  750

seq1  TGTCAGTTACCATCCAACCTCTCTCACCAGTGATACGTTCAAAGAGACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTTACCATCCAACCTCTCTCACCAGTGATACGTTCAAAGAGACTC  800

seq1  TGAGACCGGAAAGAACAAACC-TTTACCCCAAAGTCCCAGATCATCCTTG  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGAGACCGGAAAGAACAAACCTTTTACCCCAAAGTCCCAGATCATCCTTG  850

seq1  CCAGCACTGAAACCCCTCCCTCTAAACCCCATTTT-GGTAAGGCATCCCC  898
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCAGCACTGAAACCCCTCCCTCTAAACCCCATTTTGGGTAAGGCATCCCC  900

seq1  CCCATCACCCTTATCTCCTCTCCACTAACTACAGGGAAAACAGAGATAAG  948
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCCATCACCCTTATCTCCTCTCCACT-ACTACAGGGAAAACAGAGATAAG  949

seq1  -CTCC-ATGTCCCTTAGT-GGGAGTCCAAGACGGCCATG-ACAGATGAAT  994
       |||| |||||||||||| |||||||| |||| |||||| ||||||||||
seq2  CCTCCAATGTCCCTTAGTGGGGAGTCC-AGAC-GCCATGAACAGATGAAT  997

seq1  GGTTCTTAGTCTGTAGCCAGG-ATAGTCAGTATTAAACACT-GCCCTGGT  1042
      ||||||||||||||||||||| |||||||||| |||||||| ||||||||
seq2  GGTTCTTAGTCTGTAGCCAGGTATAGTCAGTA-TAAACACTGGCCCTGGT  1046

seq1  CCCCACA  1049
      |||||||
seq2  CCCCACA  1053