BAC Information

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BAC

Clone NameB6Ng01-341E22
Chromosome7 (Build37)
Map Location 74,801,003 - 74,802,006
singlet/doubletsinglet
Overlap geneTtc23
Upstream geneAsb7, Lins2, Lass3, Adamts17, Lysmd4, Mef2a, EG665304, Lrrc28
Downstream geneDmn, LOC665319, LOC100041771, Igf1r, C330024D12Rik, EG434197, LOC100041800, EG384639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341E22.bB6Ng01-341E22.g
ACCGA124725GA124726
length1,0161,176
definitionB6Ng01-341E22.b B6Ng01-341E22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtttgcttgcttgtttcagttagcttctgaagtaacagattt
cctcacaagcattctcatgtttggttgattcccctcacgcccatctccct
cccatctccctcccacaccaggtaccttcccaaccccgtttttcagcttc
tacttttgtatcacatatgttctattaccctcccctcccctccccctcca
aggttcttccccaccccaacataccccagctttgcccacttccttctaga
tacagatatttaacagttcaaagctagcatccaccttcaaggattctaga
ttaccccagatcatataataatttccagttccacccactttcctgaaagt
ttcataattttaattttgttagtgaatggatacaattccaccgtgtacat
gtactgaattttaattatccattcctcttttgatacacatataggctgat
tccctctacaatccttgctattttgaatagagcaacagtaatcgtggata
tccagcctcttctggagtaagatatagagccttttggatatatgcctgcc
taggagttgtgtagctggatcttatggtagctctgtttctagttgtttga
gacttctaatcataatggctcacttttgacaaaaatattttagtagaaaa
atccatgttacatataacctatgaacactctgtgtatgtacttggatgtg
agtatgtgtacgtatttgggattccgtgtagtgagaatttttgttttaga
aaacacaggagaaggaatgggcatttattttcatcccagaggtgaggtct
ggggctgctcggatggtccacggcagctgactctggtttgccctcgtgca
gaggcatgatttttggcagcctgcaggttgtggtttgtgtgacgcttaga
attcttgggggacttttgagagcgtattataaatttctaggggcccaata
tatggggtgtgggttggtccaatgttagttaagtacctgcgcacaaaaag
gaaataaacaagaaaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcaaccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagatttttatttga
aaggacccagatgtagctgtctcttgtgagactatgcccggggcctagca
aacacagaaagtggatgctcacagtcagctaatgggatggatcatagggc
ctccaatggagagctagagaaagtagccaagagctaaagggatctgcacc
ctataggtggaacacattatgaactaacagtacccggagctctgacctct
tagctgcattattatcaaagatgctagtcggcatcaactgaaagagaggc
cattgacctgccaactctatgcctagtacaggtaacaccaggtcaaatgc
ggtaattggtgttgacgacagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_74801003_74802006
seq2: B6Ng01-341E22.b_43_1057

seq1  GAATTCCTGTTTGCTTGCTTGTTTCAGTTAGCTTCTGAAGTAACAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTTGCTTGCTTGTTTCAGTTAGCTTCTGAAGTAACAGATTT  50

seq1  CCTCACAAGCATTCTCATGTTTGGTTGATTCCCCTCACGCCCATCTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAAGCATTCTCATGTTTGGTTGATTCCCCTCACGCCCATCTCCCT  100

seq1  CCCATCTCCCTCCCACACCAGGTACCTTCCCAACCCCGTTTTTCAGCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTCCCTCCCACACCAGGTACCTTCCCAACCCCGTTTTTCAGCTTC  150

seq1  TACTTTTGTATCACATATGTTCTATTACCCTCCCCTCCCCTCCCCCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTGTATCACATATGTTCTATTACCCTCCCCTCCCCTCCCCCTCCA  200

seq1  AGGTTCTTCCCCACCCCAACATACCCCAGCTTTGCCCACTTCCTTCTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTTCCCCACCCCAACATACCCCAGCTTTGCCCACTTCCTTCTAGA  250

seq1  TACAGATATTTAACAGTTCAAAGCTAGCATCCACCTTCAAGGATTCTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATATTTAACAGTTCAAAGCTAGCATCCACCTTCAAGGATTCTAGA  300

seq1  TTACCCCAGATCATATAATAATTTCCAGTTCCACCCACTTTCCTGAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCCAGATCATATAATAATTTCCAGTTCCACCCACTTTCCTGAAAGT  350

seq1  TTCATAATTTTAATTTTGTTAGTGAATGGATACAATTCCACCGTGTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAATTTTAATTTTGTTAGTGAATGGATACAATTCCACCGTGTACAT  400

seq1  GTACTGAATTTTAATTATCCATTCCTCTTTTGATACACATATAGGCTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAATTTTAATTATCCATTCCTCTTTTGATACACATATAGGCTGAT  450

seq1  TCCCTCTACAATCCTTGCTATTTTGAATAGAGCAACAGTAATCGTGGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTACAATCCTTGCTATTTTGAATAGAGCAACAGTAATCGTGGATA  500

seq1  TCCAGCCTCTTCTGGAGTAAGATATAGAGCCTTTTGGATATATGCCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCTCTTCTGGAGTAAGATATAGAGCCTTTTGGATATATGCCTGCC  550

seq1  TAGGAGTTGTGTAGCTGGATCTTATGGTAGCTCTGTTTCTAGTTGTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTTGTGTAGCTGGATCTTATGGTAGCTCTGTTTCTAGTTGTTTGA  600

seq1  GACTTCTAATCATAATGGCTCACTTTTGACAAAAATATTTTAGTAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTAATCATAATGGCTCACTTTTGACAAAAATATTTTAGTAGAAAA  650

seq1  ATCCATGTTACATATAACCTATGAACACTCTGTGTATGTACTTGGATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGTTACATATAACCTATGAACACTCTGTGTATGTACTTGGATGTG  700

seq1  AGTATGTGTACGTATTTGGGATTCCGTGTAGTGAGAATTTTTG-TTTAGA  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGTATGTGTACGTATTTGGGATTCCGTGTAGTGAGAATTTTTGTTTTAGA  750

seq1  AAACACAGGAGAAGGAATGGGCATTTATTTTCATCCCAGAGGTGAGGTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGGAGAAGGAATGGGCATTTATTTTCATCCCAGAGGTGAGGTCT  800

seq1  GGGGCTGCTCGGATGGTCCACGGCAGCTGACTCTGGTTTG-CCTCGTGCA  848
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGGGCTGCTCGGATGGTCCACGGCAGCTGACTCTGGTTTGCCCTCGTGCA  850

seq1  GAGGCATGA-TTTTGCCAG-CTGCAGGTTGTGG-TTGTGTGACGCTTAGA  895
      ||||||||| ||||| ||| ||||||||||||| ||||||||||||||||
seq2  GAGGCATGATTTTTGGCAGCCTGCAGGTTGTGGTTTGTGTGACGCTTAGA  900

seq1  ATTCT--GGGGACTTTTGAGAGCGTA-TATAAA-TTCTAGGGCCCCAATA  941
      |||||  ||||||||||||||||||| |||||| |||||||| |||||||
seq2  ATTCTTGGGGGACTTTTGAGAGCGTATTATAAATTTCTAGGGGCCCAATA  950

seq1  TATGGGGTGTTGGTTGGTCC-ATGTTAGTTAAGTAGCTGCGCACAAAAAG  990
      |||||||||| ||||||||| |||||||||||||| ||||||||||||||
seq2  TATGGGGTGTGGGTTGGTCCAATGTTAGTTAAGTACCTGCGCACAAAAAG  1000

seq1  GAAAT-AAGAAGAAA  1004
      ||||| || ||||||
seq2  GAAATAAACAAGAAA  1015