BAC Information

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BAC

Clone NameB6Ng01-341G04
Chromosome7 (Build37)
Map Location 108,821,946 - 108,822,978
singlet/doubletsinglet
Overlap geneClpb
Upstream geneB930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a, EG630138, Art2b
Downstream genePhox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341G04.bB6Ng01-341G04.g
ACCGA124782GA124783
length1,029696
definitionB6Ng01-341G04.b B6Ng01-341G04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaagcaggcagtcctgagcccgttccagtgtcccactgctgc
atagaaaggctgagttcttctgcctttcctttcccttctctgtgcagcag
ccatttccttcctttgccttgaagtgcttcaactttgcaaactcacaagc
tcacagctctcactcgagctgggaggctggcccctgccctgcttggcagc
cgtgagagcaggtgattccccttcttagcccagtctggcttatgcactga
gccactcatccaagaccaaggggtactggacagactgcagcacatatgtc
tgggctcaggcagagccatgtggggcctattaggctggggactcaggaca
ggactgggagatttttggccctccactgtagatcacatttccttcagatc
acactgctgatagacagcatcctgcctgctctttcccttcactggactga
gaactgggcctctgttactgctacccaacttggtcctttctcagtccaga
caggtacctttaatggctgggagacctttttttgcacagatcatgtgtcc
atttgacaaacatttactgagtacttgccatttgctgggttacttcttgg
cacaggggacacctgagctatcatgaccctttcctttgatgaagaagata
tggagctggagatggttgttatccagttgtaatcccaggactctaaagga
gggaggttggtgaatttgaggccaacctgggctacggtggtttgaccctg
tattgggcaggagaagctggactctagagagcaagaatgggtgctatgaa
atgatgctggatagctgtaaggaaggaccatccacactggatctgtagct
gtttaaagccagtgtatatataaaaggcaaaatgttagcagatagatttg
taggtaattaaaaaaaaaaaaaaagattagctgcttagtgaaaacatgtc
agcagctgctaatagtagtataggaagacagcctgaacatagctatacct
tgtatacagttcattgtggaccgctgtct
gaattcctctttcctcatgtttgccagcacagtgggaccacaaccctcgg
gtccgtccctttcccaggctaattattctttgcttgactcatgcctcggt
ttctgtaagtattctatgtcaggagttttggagttgtgtgtgtgtgtgtg
tgtgtgtgtgtgcatgtgtgcacgcatgtgtgtgtgtgtttccaagccat
tttcccttgctttgggtatgttgtgttaaaatatgcataaacacaaattt
taccattatagctattttaattgtatatttcagtgttgctagttctcatc
atgttggacaatacagcatcactgtcttgtttatatttatttccataatt
cttgatcttgtataacccaaactccatacatgaagaaataactctctaac
caccttccctaccttctggtagctacccttctgatatctatctatctatc
tatctatctatctatctatctatctatctatctacctatgtagttttttg
agatagggtctcctgtatcccaggtggccttgatccccctgtgtagctaa
gcatgatcttgaatacctaaattctcctgacccttgctctgaccagctgc
atgcactaacactcagtttttatgagaggttctgggatctaatccaggac
tatatgtacactaggtgagcacttttatcactgagctaaataccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_108821946_108822978
seq2: B6Ng01-341G04.b_46_1074

seq1  GAATTCAACAAGCAGGCAGTCCTGAGCCCGTTCCAGTGTCCCACTGCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAAGCAGGCAGTCCTGAGCCCGTTCCAGTGTCCCACTGCTGC  50

seq1  ATAGAAAGGCTGAGTTCTTCTGCCTTTCCTTTCCCTTCTCTGTGCAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGGCTGAGTTCTTCTGCCTTTCCTTTCCCTTCTCTGTGCAGCAG  100

seq1  CCATTTCCTTCCTTTGCCTTGAAGTGCTTCAACTTTGCAAACTCACAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCTTCCTTTGCCTTGAAGTGCTTCAACTTTGCAAACTCACAAGC  150

seq1  TCACAGCTCTCACTCGAGCTGGGAGGCTGGCCCCTGCCCTGCTTGGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCTCTCACTCGAGCTGGGAGGCTGGCCCCTGCCCTGCTTGGCAGC  200

seq1  CGTGAGAGCAGGTGATTCCCCTTCTTAGCCCAGTCTGGCTTATGCACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAGAGCAGGTGATTCCCCTTCTTAGCCCAGTCTGGCTTATGCACTGA  250

seq1  GCCACTCATCCAAGACCAAGGGGTACTGGACAGACTGCAGCACATATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTCATCCAAGACCAAGGGGTACTGGACAGACTGCAGCACATATGTC  300

seq1  TGGGCTCAGGCAGAGCCATGTGGGGCCTATTAGGCTGGGGACTCAGGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCAGGCAGAGCCATGTGGGGCCTATTAGGCTGGGGACTCAGGACA  350

seq1  GGACTGGGAGATTTTTGGCCCTCCACTGTAGATCACATTTCCTTCAGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGGGAGATTTTTGGCCCTCCACTGTAGATCACATTTCCTTCAGATC  400

seq1  ACACTGCTGATAGACAGCATCCTGCCTGCTCTTTCCCTTCACTGGACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCTGATAGACAGCATCCTGCCTGCTCTTTCCCTTCACTGGACTGA  450

seq1  GAACTGGGCCTCTGTTACTGCTACCCAACTTGGTCCTTTCTCAGTCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGGCCTCTGTTACTGCTACCCAACTTGGTCCTTTCTCAGTCCAGA  500

seq1  CAGGTACCTTTAATGGCTGGGAGACCTTTTTTTGCACAGATCATGTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACCTTTAATGGCTGGGAGACCTTTTTTTGCACAGATCATGTGTCC  550

seq1  ATTTGACAAACATTTACTGAGTACTTGCCATTTGCTGGGTTACTTCTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACAAACATTTACTGAGTACTTGCCATTTGCTGGGTTACTTCTTGG  600

seq1  CACAGGGGACACCTGAGCTATCATGACCCTTTCCTTTGATGAAGAAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGGACACCTGAGCTATCATGACCCTTTCCTTTGATGAAGAAGATA  650

seq1  TGGAGCTGGAGATGGTTGTTATCCAGTTGTAATCCCAGGACTCTAAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTGGAGATGGTTGTTATCCAGTTGTAATCCCAGGACTCTAAAGGA  700

seq1  GGGAGGTTGGTGAATTTGAGGCCAACCTGGGCTACGGTGGTTTGACCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTTGGTGAATTTGAGGCCAACCTGGGCTACGGTGGTTTGACCCTG  750

seq1  TATTGGGCAGGAGAAGCTGGACTCTAGAGAGCAAGAATGGGTGCTATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGCAGGAGAAGCTGGACTCTAGAGAGCAAGAATGGGTGCTATGAA  800

seq1  ATGATGCTGGATAGCTGTAAGGAAGGACCATCCACACTGGATCTGTAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCTGGATAGCTGTAAGGAAGGACCATCCACACTGGATCTGTAGCT  850

seq1  GTTTAAAGCCAGTGTATATATAAAAGGCAAAAATGTTAGCAGATAGATTT  900
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTTTAAAGCCAGTGTATATATAAAAGGC-AAAATGTTAGCAGATAGATTT  899

seq1  GTAGGTAATTAAAAAAAAAAAAAAAGATTAGCTGCTTAGTGGAAAACATG  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTAGGTAATTAAAAAAAAAAAAAAAGATTAGCTGCTTAGT-GAAAACATG  948

seq1  TCAGCCAGCTGCT-ATAGTAGTATAGGAAGACAGCCTGAAACATAGCTAT  999
      |||| |||||||| |||||||||||||||||||||||| |||||||||||
seq2  TCAG-CAGCTGCTAATAGTAGTATAGGAAGACAGCCTG-AACATAGCTAT  996

seq1  AACTTGTATACAG-TCATTGGTGGAACGCTTGTCT  1033
      | ||||||||||| ||||| ||||| ||| |||||
seq2  ACCTTGTATACAGTTCATT-GTGGACCGC-TGTCT  1029