BAC Information

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BAC

Clone NameB6Ng01-341M04
Chromosome7 (Build37)
Map Location 91,260,306 - 91,377,519
singlet/doubletdoublet
Overlap gene2210412D01Rik
Upstream geneA530021J07Rik, EG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik
Downstream geneArnt2, LOC100039239, Fah, Zfand6, 2610206C17Rik, EG620480, Olfr291, LOC666276, Olfr290, ENSMUSG00000070600, F830104D24Rik, LOC620641, EG620672, Vmn2r-ps68, EG620697
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341M04.bB6Ng01-341M04.g
ACCGA125052GA125053
length1,1561,092
definitionB6Ng01-341M04.b B6Ng01-341M04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,260,306 - 91,261,472)(91,376,426 - 91,377,519)
sequence
gaattctcatggatcttccaaagactgtgctttaggtctgaaaacacatc
cagggaggagcaaaagggccgtcagcatgtgtcaggctgggtggacaggc
cactgctctgatggggtgatgacccttcaagccatgaataaacacctctt
tccatctgtccttctgcccaagacctgcttgctgctggctctgttttata
gtcgatcctcgtcaggattgtagcgggacgcagatggggctatttgtggg
agtttttctgataaagtaacagctaacatccatcatagcagaacacttta
cacagtccgcatgaagtctcatttaatccttatgaaaaaggacccacgag
gaattgctttctctgtttaatcagggagggaactgaagctcgaagattac
aaaataacaggcaaggggccagggagataataaagaaggctaacatcagt
tacacattccaaaggtctacaagtgactgtcacacagtctttatgcttta
agctgccaactgctaaaaggtaccccagaaaccccatcagccataggacc
tgtgaagatcagagcctctgtggccatgtgcagttttgcaggccaggaat
cgtaccaaaaacttactcttctcctggatttaattttaaattgccttgct
ttataagccttcaattgcactcaattaaaaaatgtatttattcaacagtt
atgacaggcctgagaccacatcccatgctgctatttataggaatctctta
agttgaaagccactgtccggccctatttgcaaaggcagaggataaccaac
actgaagcatgaccaggactcaatcaatctctctctctctctctctctct
ctctctctctctctctctctgtgaacacagaaggaactgtgaaagccgcc
ttccctttgagaaagacacattctgccatttgacagcaaggaacatcata
aaaggaaattgttgccaaatccaattaatgatgaacgcagtatagccatt
aatgcgctcgaaatccttccatcaatatttagggagcaatggcccttttg
tctccaacctaacgaagcagtgacgtcactggctttgacttgatctgtaa
agaatacagtacctggatcaccttcaagctgttggaagccatactgcagg
cagcct
gaattcagtgcctcagtcccacatgaaggtaggaaagaattgcctcaagg
ttatcctcatttacatgtatagcatggcacatgtacttccccatacctca
catgcaaaacatgcacattcgataacatatatttttaatttgaaaagaaa
atcagtcacttaagagatcacaaggtttaggtctttgatctggaatgttt
accaaccccaattgtcagctagggtgagagtggtctatgtattagatgag
agcttcttgacccagtcaaacctggccatcggggactgaaggccaagatg
actgctctggaaacagtgtatgcccggactctgtggcttctttcctccat
ctctgctcctgttctcgggccactcttggccagggttcagagcctggtca
cttccgtttgcgtctgaacttttgcggtataaccccttggagagcttggc
ctgtagagaaggaaggtctgacaatcgcctagagccttgactcacttttg
ccaaagggcaaatgtctgtggaatgatttcctaagggaagtaagaggatt
cagtggaatcatgaggccttgcggacaacagcaactcaaccggaaaccac
tcagatggggagctggaagcaaccaagagtagggatgggcaatagaggag
acctaccaagggtggagcagacaagggtggatagaaagcctgccttcaga
taaaagtaatgcttgtccatctacagcgcatctctcaaattccatcttta
agcaccttgtccagaactatgataaggtaaagtctcgtttagattaaaac
taaagcaagttttagatattttaataatctgctccaagctgttttttttt
tttttttagtctaagaggggaagctttgggttctgctaaatattgttttt
ccaaatcctctgtttgtcttaggaagtcccagggctcttgttctcattta
catgttggcttgcctcagctaggcatcctcagttgaactcctgtccttcc
cagtttatggtgctgcctgggaaggagcccacacctgtggaggtcatagc
agaacctgcctccagagcagaagaaggtccatgcctttgcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_91260306_91261472
seq2: B6Ng01-341M04.b_50_1205

seq1  GAATTCTCATGGATCTTCCAAAGACTGTGCTTTAGGTCTGAAAACACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGGATCTTCCAAAGACTGTGCTTTAGGTCTGAAAACACATC  50

seq1  CAGGGAGGAGCAAAAGGGCCGTCAGCATGTGTCAGGCTGGGTGGACAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGAGCAAAAGGGCCGTCAGCATGTGTCAGGCTGGGTGGACAGGC  100

seq1  CACTGCTCTGATGGGGTGATGACCCTTCAAGCCATGAATAAACACCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTCTGATGGGGTGATGACCCTTCAAGCCATGAATAAACACCTCTT  150

seq1  TCCATCTGTCCTTCTGCCCAAGACCTGCTTGCTGCTGGCTCTGTTTTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGTCCTTCTGCCCAAGACCTGCTTGCTGCTGGCTCTGTTTTATA  200

seq1  GTCGATCCTCGTCAGGATTGTAGCGGGACGCAGATGGGGCTATTTGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGATCCTCGTCAGGATTGTAGCGGGACGCAGATGGGGCTATTTGTGGG  250

seq1  AGTTTTTCTGATAAAGTAACAGCTAACATCCATCATAGCAGAACACTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCTGATAAAGTAACAGCTAACATCCATCATAGCAGAACACTTTA  300

seq1  CACAGTCCGCATGAAGTCTCATTTAATCCTTATGAAAAAGGACCCACGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCCGCATGAAGTCTCATTTAATCCTTATGAAAAAGGACCCACGAG  350

seq1  GAATTGCTTTCTCTGTTTAATCAGGGAGGGAACTGAAGCTCGAAGATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCTTTCTCTGTTTAATCAGGGAGGGAACTGAAGCTCGAAGATTAC  400

seq1  AAAATAACAGGCAAGGGGCCAGGGAGATAATAAAGAAGGCTAACATCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACAGGCAAGGGGCCAGGGAGATAATAAAGAAGGCTAACATCAGT  450

seq1  TACACATTCCAAAGGTCTACAAGTGACTGTCACACAGTCTTTATGCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTCCAAAGGTCTACAAGTGACTGTCACACAGTCTTTATGCTTTA  500

seq1  AGCTGCCAACTGCTAAAAGGTACCCCAGAAACCCCATCAGCCATAGGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCAACTGCTAAAAGGTACCCCAGAAACCCCATCAGCCATAGGACC  550

seq1  TGTGAAGATCAGAGCCTCTGTGGCCATGTGCAGTTTTGCAGGCCAGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGATCAGAGCCTCTGTGGCCATGTGCAGTTTTGCAGGCCAGGAAT  600

seq1  CGTACCAAAAACTTACTCTTCTCCTGGATTTAATTTTAAATTGCCTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACCAAAAACTTACTCTTCTCCTGGATTTAATTTTAAATTGCCTTGCT  650

seq1  TTATAAGCCTTCAATTGCACTCAATTAAAAAATGTATTTATTCAACAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGCCTTCAATTGCACTCAATTAAAAAATGTATTTATTCAACAGTT  700

seq1  ATGACAGGCCTGAGACCACATCCCATGCTGCTATTTATAGGAATCTCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGGCCTGAGACCACATCCCATGCTGCTATTTATAGGAATCTCTTA  750

seq1  AGTTGAAAGCCACTGTCCGGCCCTATTTGCAAAGGCAGAGGATAACCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAAGCCACTGTCCGGCCCTATTTGCAAAGGCAGAGGATAACCAAC  800

seq1  ACTGAAGCATGACCAGGACTCAATCAATCTCTCTCTCTCTCTCTCTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGCATGACCAGGACTCAATCAATCTCTCTCTCTCTCTCTCTCTCT  850

seq1  CTCTCTCTCTCTCTCTCTCTCTCTAACACAGGAAGGAACCGTGAAAGCCG  900
      |||||||||||||||||||| |  |||||| |||||||| ||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTGT-GAACACA-GAAGGAACTGTGAAAGCCG  898

seq1  CCTTCCCTTTGAGAAAGACAACATTCTGCCATTTGACAGCAAGGAACATC  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTTCCCTTTGAGAAAGAC-ACATTCTGCCATTTGACAGCAAGGAACATC  947

seq1  ATAAAAGGAAA-TGTTGCCAAATCCAATTAATGATGAAGGCCAGTATAGC  999
      ||||||||||| |||||||||||||||||||||||||| | |||||||||
seq2  ATAAAAGGAAATTGTTGCCAAATCCAATTAATGATGAACG-CAGTATAGC  996

seq1  CATTAATG-GCTTGAAATCTATTCCATCAATAATTTAGGGAGCAATGGCC  1048
      |||||||| ||| ||||||  |||||||||| ||||||||||||||||||
seq2  CATTAATGCGCTCGAAATC-CTTCCATCAAT-ATTTAGGGAGCAATGGCC  1044

seq1  CTTTTGTCTCCAACCTTACGAAGCCAGTGACGTCACTGCTTTTGGCCTGA  1098
      |||||||||||||||| |||||| ||||||||||||||  |||| | |||
seq2  CTTTTGTCTCCAACCTAACGAAG-CAGTGACGTCACTGGCTTTGACTTGA  1093

seq1  TCTGTAAAGAATACAGTAACTGGATCAACTTTTCAAAGCTGTTGGGAAGG  1148
      |||||||||||||||||| |||||||| |||    |||||||| ||||| 
seq2  TCTGTAAAGAATACAGTACCTGGATCACCTT---CAAGCTGTT-GGAAGC  1139

seq1  CTAACTGCAGGGCCAGCCT  1167
      |  ||||||||  ||||||
seq2  CATACTGCAGG--CAGCCT  1156

seq1: chr7_91376426_91377519
seq2: B6Ng01-341M04.g_67_1158 (reverse)

seq1  GTGCAAAGGCATTGACCTCCTTCTGCTCTGGA-GCAGGTTCCTGCTATTG  49
      |||||||||||| ||||| ||||||||||||| ||||||| |||||| ||
seq2  GTGCAAAGGCATGGACCTTCTTCTGCTCTGGAGGCAGGTT-CTGCTA-TG  48

seq1  ACCCTCCAACAGTGTGGGCTTCCTTTTCCCAGGCAGCA-CATAAACTGGG  98
      | ||||||   ||||||||| |   ||||||||||||| |||||||||||
seq2  A-CCTCCACAGGTGTGGGCTCC---TTCCCAGGCAGCACCATAAACTGGG  94

seq1  AAGGACA-GAGTTCAACTGA-GATGCCTAGCTGA-GCAAGCCAACATGTA  145
      ||||||| |||||||||||| ||||||||||||| |||||||||||||||
seq2  AAGGACAGGAGTTCAACTGAGGATGCCTAGCTGAGGCAAGCCAACATGTA  144

seq1  AATGAGAACAAGAGCCCTGGGACTTTCCTAAGACAAACAGAGGATTTGGA  195
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AATGAGAACAAGAGCCCTGGGAC-TTCCTAAGACAAACAGAGGATTTGGA  193

seq1  AAAACAATATTTAGCAGAACCCAAAGCTTCCCCTCCTAGACT-AAAAAAA  244
      ||||||||||||||||||||||||||||||||||| |||||| |||||||
seq2  AAAACAATATTTAGCAGAACCCAAAGCTTCCCCTCTTAGACTAAAAAAAA  243

seq1  AAAAAAAACAGCTTGGAGCAGATTATTTAAAATATCTAAAACTTGCTTTA  294
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAAAAAAACAGCTTGGAGCAGATTA-TTAAAATATCTAAAACTTGCTTTA  292

seq1  GTTTTAATCTAAACGAGACTTTACCTTATCATAGTTCTGGACAAGGTGCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATCTAAACGAGACTTTACCTTATCATAGTTCTGGACAAGGTGCT  342

seq1  TAAAGATGGAATTTGAGAGATGCGCTGTAGATGGACAAGCATTACTTTTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATGGAATTTGAGAGATGCGCTGTAGATGGACAAGCATTACTTTTA  392

seq1  TCTGAAGGCAGGCTTTCTATCCACCCTTGTCTGCTCCACCCTTGGTAGGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGGCAGGCTTTCTATCCACCCTTGTCTGCTCCACCCTTGGTAGGT  442

seq1  CTCCTCTATTGCCCATCCCTACTCTTGGTTGCTTCCAGCTCCCCATCTGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTATTGCCCATCCCTACTCTTGGTTGCTTCCAGCTCCCCATCTGA  492

seq1  GTGGTTTCCGGTTGAGTTGCTGTTGTCCGCAAGGCCTCATGATTCCACTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTCCGGTTGAGTTGCTGTTGTCCGCAAGGCCTCATGATTCCACTG  542

seq1  AATCCTCTTACTTCCCTTAGGAAATCATTCCACAGACATTTGCCCTTTGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTTACTTCCCTTAGGAAATCATTCCACAGACATTTGCCCTTTGG  592

seq1  CAAAAGTGAGTCAAGGCTCTAGGCGATTGTCAGACCTTCCTTCTCTACAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTGAGTCAAGGCTCTAGGCGATTGTCAGACCTTCCTTCTCTACAG  642

seq1  GCCAAGCTCTCCAAGGGGTTATACCGCAAAAGTTCAGACGCAAACGGAAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCTCTCCAAGGGGTTATACCGCAAAAGTTCAGACGCAAACGGAAG  692

seq1  TGACCAGGCTCTGAACCCTGGCCAAGAGTGGCCCGAGAACAGGAGCAGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGGCTCTGAACCCTGGCCAAGAGTGGCCCGAGAACAGGAGCAGAG  742

seq1  ATGGAGGAAAGAAGCCACAGAGTCCGGGCATACACTGTTTCCAGAGCAGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGAAAGAAGCCACAGAGTCCGGGCATACACTGTTTCCAGAGCAGT  792

seq1  CATCTTGGCCTTCAGTCCCCGATGGCCAGGTTTGACTGGGTCAAGAAGCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGGCCTTCAGTCCCCGATGGCCAGGTTTGACTGGGTCAAGAAGCT  842

seq1  CTCATCTAATACATAGACCACTCTCACCCTAGCTGACAATTGGGGTTGGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTAATACATAGACCACTCTCACCCTAGCTGACAATTGGGGTTGGT  892

seq1  AAACATTCCAGATCAAAGACCTAAACCTTGTGATCTCTTAAGTGACTGAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCCAGATCAAAGACCTAAACCTTGTGATCTCTTAAGTGACTGAT  942

seq1  TTTCTTTTCAAATTAAAAATATATGTTATCGAATGTGCATGTTTTGCATG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCAAATTAAAAATATATGTTATCGAATGTGCATGTTTTGCATG  992

seq1  TGAGGTATGGGGAAGTACATGTGCCATGCTATACATGTAAATGAGGATAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTATGGGGAAGTACATGTGCCATGCTATACATGTAAATGAGGATAA  1042

seq1  CCTTGAGGCAATTCTTTCCTACCTTCATGTGGGACTGAGGCACTGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGGCAATTCTTTCCTACCTTCATGTGGGACTGAGGCACTGAATTC  1092