BAC Information

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BAC

Clone NameB6Ng01-342J07
Chromosome7 (Build37)
Map Location 94,684,057 - 94,836,503
singlet/doubletdoublet
Overlap geneGrm5
Upstream geneOlfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342J07.bB6Ng01-342J07.g
ACCGA125622GA125623
length1,1151,180
definitionB6Ng01-342J07.b B6Ng01-342J07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,684,057 - 94,685,160)(94,835,327 - 94,836,503)
sequence
gaattcctgacctttccaagacttttatcatgaatgagtgttggattttg
tgaaatgctttctctgcatctaatgagatgatcatgtggtttttgtcttt
gagtctgcttatatagtggattacgttgatggatttctgtatattaaacc
atccctgcatccctggaatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattctcttaacgagaattttttttgagtatttttg
catcgatattcataagggaaattggtctgaagttctctatctttgttgtg
tctttctctggtttaggtatcagagtaattgtagcttcatagaatgaatt
gggtagcataccttctctttctattttgtggaatattttgtgaagaacta
gaacagattgaaaactgttattttaatgtattctatgatataaaaacaaa
acaaaaaggatgcttaagtatcttacacaattcctgaaaggacaatttgt
ttagagagatgcttgcattttagatattgcattccctacatgagtattca
cattctagatttaaagttgaaagaccataattccacacgtgctcctcaca
gtattcttttcaacataaaaacaatgatttttttttcttattattattac
aatttttttttctagacagtgtttctctgtgtatctctggctgtcctgga
actcactctgtaaaccatgctggcctcaaactcagaaatccacctgcttc
tgcctcctaagtgctggaattaaaggtgtgtgccaccactgccaggctta
ttttttttaaaactcatttttaaaagtgtatctttacattcaaagatacc
tatctggatagtcataatttcagagtttctaaatgattgtgacaaacaaa
attataataccatttatttttacccctagtattgttgccatttattattt
attatgagtggatttagtatctagcttccaataagaagatgaagttatac
ttaaagttccatatatatatacttatttatagtctagataaaaaattaga
tccattattctgggaatggagcataacttttactttttctaattttaaga
aggtaaatacacatt
gaattcctgaaacagcacttatataaaagtatttaaatggatacacagac
aatcttggggtaagagttagtccatggaggctaatctgaagcaaataata
ggattagatgatcccacttgaaaatcatggggatgactgattacagcaaa
gatcagcaaagactgatgaaaaacctagtgttaacttcattatcgagtaa
attcccgttagatacatattatttattagctaataaatagcatacttatt
gctttcttatgagaaaaaattgacttgttatcaatcagatgctaaatgtt
aaaattcataatggtactagtgaatctcctgtatcttatgatgcaatgct
cttaagagagcacagcatcacctctttggctctgcaagtcttagttacaa
cgtgtgtaaaatgtggttaacattgtgacaatgtacgttggttctggtaa
gaatgaaatgtggtaagcagagcatgcctcactttcatttgaagaatatt
acatttagtcatcagacattattttgcataaatactcacactgaaactag
cacagagctgtttgtgaaattgcttatttgttgtgttggttccacctatt
tgagtagttaatttggtaaatttaatgatgctttaagtgaaatgattcta
gttaatgattattgatttgaacctcaagaagagggaaacaaaattgattc
tcaggcaattacaacctaaaatacatatattgagtggatgcaaatgtgga
ctgattaaagataatgactaattaaaaacgatataaaattagacccaggt
tggggagagacaaattattgctgtgagagtaattaaagcaaaaatggaga
tgactgaccaaagagtaaatgggtttgcctgtcagatgttttctttcact
actggagggaaatgtccatgatagtattatatgaccctgaagctggatgc
tgttgtgattttcttcctttgagaaagaagttacaatagatttccagtgt
tcgtaatgtttgatatatatttcatacatctacaattcttcttcctattt
atgctatttttctgtggtatcatattatttaaatataaaattattttcct
caatatgagctattgacaatgttttctattcaagagagatttgtctttca
ggtttgtttattgagagttagagttataat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94684057_94685160
seq2: B6Ng01-342J07.b_48_1162

seq1  GAATTCCTGACCTTTCCAAGACTTTTATCATGAATGAGTGTTGGATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACCTTTCCAAGACTTTTATCATGAATGAGTGTTGGATTTTG  50

seq1  TGAAATGCTTTCTCTGCATCTAATGAGATGATCATGTGGTTTTTGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCTTTCTCTGCATCTAATGAGATGATCATGTGGTTTTTGTCTTT  100

seq1  GAGTCTGCTTATATAGTGGATTACGTTGATGGATTTCTGTATATTAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGCTTATATAGTGGATTACGTTGATGGATTTCTGTATATTAAACC  150

seq1  ATCCCTGCATCCCTGGAATGAAACCTACTTGGTCAGGATGGATGATTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGCATCCCTGGAATGAAACCTACTTGGTCAGGATGGATGATTGTT  200

seq1  TTGATGTGTTCTTGGATTCTCTTAACGAGAATTTTTTTTGAGTATTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTGTTCTTGGATTCTCTTAACGAGAATTTTTTTTGAGTATTTTTG  250

seq1  CATCGATATTCATAAGGGAAATTGGTCTGAAGTTCTCTATCTTTGTTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGATATTCATAAGGGAAATTGGTCTGAAGTTCTCTATCTTTGTTGTG  300

seq1  TCTTTCTCTGGTTTAGGTATCAGAGTAATTGTAGCTTCATAGAATGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCTGGTTTAGGTATCAGAGTAATTGTAGCTTCATAGAATGAATT  350

seq1  GGGTAGCATACCTTCTCTTTCTATTTTGTGGAATATTTTGTGAAGAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGCATACCTTCTCTTTCTATTTTGTGGAATATTTTGTGAAGAACTA  400

seq1  GAACAGATTGAAAACTGTTATTTTAATGTATTCTATGATATAAAAACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGATTGAAAACTGTTATTTTAATGTATTCTATGATATAAAAACAAA  450

seq1  ACAAAAAGGATGCTTAAGTATCTTACACAATTCCTGAAAGGACAATTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAGGATGCTTAAGTATCTTACACAATTCCTGAAAGGACAATTTGT  500

seq1  TTAGAGAGATGCTTGCATTTTAGATATTGCATTCCCTACATGAGTATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAGATGCTTGCATTTTAGATATTGCATTCCCTACATGAGTATTCA  550

seq1  CATTCTAGATTTAAAGTTGAAAGACCATAATTCCACACGTGCTCCTCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAGATTTAAAGTTGAAAGACCATAATTCCACACGTGCTCCTCACA  600

seq1  GTATTCTTTTCAACATAAAAACAATGATTTTTTTTTCTTATTATTATTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTTTTCAACATAAAAACAATGATTTTTTTTTCTTATTATTATTAC  650

seq1  AATTTTTTTTTCTAGACAGTGTTTCTCTGTGTATCTCTGGCTGTCCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTTCTAGACAGTGTTTCTCTGTGTATCTCTGGCTGTCCTGGA  700

seq1  ACTCACTCTGTAAACCATGCTGGCCTCAAACTCAGAAATCCACCTGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCTGTAAACCATGCTGGCCTCAAACTCAGAAATCCACCTGCTTC  750

seq1  TGCCTCCTAAGTGCTGGAATTAAAGGTGTGTGCCACCACTGCCAGGCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTAAGTGCTGGAATTAAAGGTGTGTGCCACCACTGCCAGGCTTA  800

seq1  TTTTTTTTAAAACTCATTTTTAAAAGTGTATCTTTACATTCAAAGATACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAAAACTCATTTTTAAAAGTGTATCTTTACATTCAAAGATACC  850

seq1  TATCTGGATAGTCATAA-TTCAGAGTTTCTAAATGATTGTGACAAACAAA  899
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  TATCTGGATAGTCATAATTTCAGAGTTTCTAAATGATTGTGACAAAC-AA  899

seq1  AATTATAATA-CATTTATTTTTACCCCTAGTATTGTTGCCATTTATTATT  948
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AATTATAATACCATTTATTTTTACCCCTAGTATTGTTGCCATTTATTATT  949

seq1  TATTATGAGT-GATTTAGTATCTAGCTTCCAAATAAGAAGATGAAG-TAT  996
      |||||||||| ||||||||||||||||||| ||||||||||||||| |||
seq2  TATTATGAGTGGATTTAGTATCTAGCTTCC-AATAAGAAGATGAAGTTAT  998

seq1  ACTT-AAGGTCCATATATATATACTTATTTATAGTCTAGATAAAAAA-TA  1044
      |||| ||| |||||||||||||||||||||||||||||||||||||| ||
seq2  ACTTAAAGTTCCATATATATATACTTATTTATAGTCTAGATAAAAAATTA  1048

seq1  GATCCATTATTCT--GAAT-GAGCATAACTTTAAC-TTTTCTAATTTT-A  1089
      |||||||||||||  |||| |||||||||||| || |||||||||||| |
seq2  GATCCATTATTCTGGGAATGGAGCATAACTTTTACTTTTTCTAATTTTAA  1098

seq1  GAA-GTAAATA-ACATT  1104
      ||| ||||||| |||||
seq2  GAAGGTAAATACACATT  1115

seq1: chr7_94835327_94836503
seq2: B6Ng01-342J07.g_66_1245 (reverse)

seq1  ATTATATACTCTTAACTCTTCAATAACACAACCTGAAAGACAAA--TCTC  48
      |||||| |||| |||||| |||||||   |||||||||||||||  ||||
seq2  ATTATA-ACTC-TAACTC-TCAATAAACAAACCTGAAAGACAAATCTCTC  47

seq1  TTG-ATAG-AAACA-TGTCAATAGCTCATAATTGA-GAAAATAATTTTAT  94
      ||| |||| ||||| |||||||||||||| ||||| ||||||||||||||
seq2  TTGAATAGAAAACATTGTCAATAGCTCAT-ATTGAGGAAAATAATTTTAT  96

seq1  A-TTAAAT-ATATGATTACACAGAAAATAAGCATAAATAGGA--GAGAAT  140
      | |||||| |||||||  |||||||||  |||||||||||||   |||||
seq2  ATTTAAATAATATGATACCACAGAAAAATAGCATAAATAGGAAGAAGAAT  146

seq1  TGTAGATGTAATGAAATTATAATATCAAACATTACGAACACTGGAAATCT  190
      ||||||||| |||||| ||| |||||||||||||||||||||||||||||
seq2  TGTAGATGT-ATGAAA-TAT-ATATCAAACATTACGAACACTGGAAATCT  193

seq1  ATTGTAACTTCTTTCTCAAAGGAAGAAAATCACAACAGCATCCAGCTTCA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAACTTCTTTCTCAAAGGAAGAAAATCACAACAGCATCCAGCTTCA  243

seq1  GGGTCATATAATACTATCATGGACATTTCCCTCCAGTAGTGAAAGAAAAC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATATAATACTATCATGGACATTTCCCTCCAGTAGTGAAAGAAAAC  293

seq1  ATCTGACAGGCAAACCCATTTACTCTTTGGTCAGTCATCTCCATTTTTGC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACAGGCAAACCCATTTACTCTTTGGTCAGTCATCTCCATTTTTGC  343

seq1  TTTAATTACTCTCACAGCAATAATTTGTCTCTCCCCAACCTGGGTCTAAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTACTCTCACAGCAATAATTTGTCTCTCCCCAACCTGGGTCTAAT  393

seq1  TTTATATCGTTTTTAATTAGTCATTATCTTTAATCAGTCCACATTTGCAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATCGTTTTTAATTAGTCATTATCTTTAATCAGTCCACATTTGCAT  443

seq1  CCACTCAATATATGTATTTTAGGTTGTAATTGCCTGAGAATCAATTTTGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAATATATGTATTTTAGGTTGTAATTGCCTGAGAATCAATTTTGT  493

seq1  TTCCCTCTTCTTGAGGTTCAAATCAATAATCATTAACTAGAATCATTTCA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTTCTTGAGGTTCAAATCAATAATCATTAACTAGAATCATTTCA  543

seq1  CTTAAAGCATCATTAAATTTACCAAATTAACTACTCAAATAGGTGGAACC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGCATCATTAAATTTACCAAATTAACTACTCAAATAGGTGGAACC  593

seq1  AACACAACAAATAAGCAATTTCACAAACAGCTCTGTGCTAGTTTCAGTGT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACAAATAAGCAATTTCACAAACAGCTCTGTGCTAGTTTCAGTGT  643

seq1  GAGTATTTATGCAAAATAATGTCTGATGACTAAATGTAATATTCTTCAAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTTATGCAAAATAATGTCTGATGACTAAATGTAATATTCTTCAAA  693

seq1  TGAAAGTGAGGCATGCTCTGCTTACCACATTTCATTCTTACCAGAACCAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTGAGGCATGCTCTGCTTACCACATTTCATTCTTACCAGAACCAA  743

seq1  CGTACATTGTCACAATGTTAACCACATTTTACACACGTTGTAACTAAGAC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACATTGTCACAATGTTAACCACATTTTACACACGTTGTAACTAAGAC  793

seq1  TTGCAGAGCCAAAGAGGTGATGCTGTGCTCTCTTAAGAGCATTGCATCAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAGCCAAAGAGGTGATGCTGTGCTCTCTTAAGAGCATTGCATCAT  843

seq1  AAGATACAGGAGATTCACTAGTACCATTATGAATTTTAACATTTAGCATC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACAGGAGATTCACTAGTACCATTATGAATTTTAACATTTAGCATC  893

seq1  TGATTGATAACAAGTCAATTTTTTCTCATAAGAAAGCAATAAGTATGCTA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATAACAAGTCAATTTTTTCTCATAAGAAAGCAATAAGTATGCTA  943

seq1  TTTATTAGCTAATAAATAATATGTATCTAACGGGAATTTACTCGATAATG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGCTAATAAATAATATGTATCTAACGGGAATTTACTCGATAATG  993

seq1  AAGTTAACACTAGGTTTTTCATCAGTCTTTGCTGATCTTTGCTGTAATCA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAACACTAGGTTTTTCATCAGTCTTTGCTGATCTTTGCTGTAATCA  1043

seq1  GTCATCCCCATGATTTTCAAGTGGGATCATCTAATCCTATTATTTGCTTC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCCCATGATTTTCAAGTGGGATCATCTAATCCTATTATTTGCTTC  1093

seq1  AGATTAGCCTCCATGGACTAACTCTTACCCCAAGATTGTCTGTGTATCCA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGCCTCCATGGACTAACTCTTACCCCAAGATTGTCTGTGTATCCA  1143

seq1  TTTAAATACTTTTATATAAGTGCTGTTTCAGGAATTC  1177
      |||||||||||||||||||||||||||||||||||||
seq2  TTTAAATACTTTTATATAAGTGCTGTTTCAGGAATTC  1180