BAC Information

Click to search

BAC

Clone NameB6Ng01-342O05
Chromosome7 (Build37)
Map Location 50,327,511 - 50,328,524
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434175, LOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612
Downstream geneLOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342O05.bB6Ng01-342O05.g
ACCGA125827GA125828
length1,1501,011
definitionB6Ng01-342O05.b B6Ng01-342O05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatatattttggatattagccttctagtagatgtgggtgaag
attttttctcaatctgtaggttgctgctttgtcctgttgactatatcctt
gccttacagaagctttccagtttcatatggtaccatttatcagttctaga
tcttagagcatgagtcattggaattatttttatgaaatttcccgctgtag
taatgaatattaggctctttctcactttctcaactatttgattcattgta
tctggttttatattgaggtcattgatctacttggacttatgctttgtgca
atgtgataagtatggatttataatcatttttccacatacagactaccagt
tagaccagcaccatctagtggcccaaagtactttgccacagactctctgg
gtccctggtctgtgaagaacgggatttcttaggcagatggacaaagagtt
tggatgaaaatgacagacagatacacgaaagatgtgttgaatctgaatgt
attgttctggttgagcttcagacttatataacaacgaattatcagaggat
acaaatcacaaaaagacaagatacactgaaattcaccagttacagcagaa
aggaatttacagggactaattaaatgtttacattagggataacaagccct
gcctaggatcagcctaatgccaggcaagaatttcacactttaaggttaaa
agcatcagggggttgttaactcttgacaggccttaagagtaatgcgctat
cacagagctctaaattcttaggtctagtaaaacttatcttgtctggagag
tttccccttatcagggtagtatatcaacttatacttgacatggaagtagc
ctgtagtaaaagatttctatctcagtgagacttttagtctctatctgtaa
acagctgagtaaatggcaagtgcttaattgttactgaatgggttaagctt
cttgctgctatctggaatctagaacactgggaaaaggctttagctatgtt
agaatacatcttaaaaggcattactattaaagtattactaattaagaggt
gccacgtggatctatacactagactattgtggtttggaaactactttatg
ggttaaggaatagccaaagatccgggtaagtttccttgaaacttttctcc

gaattcaaataagagaaaatcctatttatgaaagcaatttaggaaagatt
tttgacaccacagttgtctctaatttcaagaaagtaatatttttttcttt
cacctctttttcatcagagccttgaagcaagtaaactatttaccatattt
agtcaagactgatggaagaaatcactaaaatgtggtttctattttgaaac
atttggagtataaagtgtgctttatgtgtggtaaattcatttagtgaatg
ttattttgtggttcatggattccttctgtggctcttttatcattttctat
tgtgctgtcatttgatgataggtattgatctgctgaaatgtatagaatga
aatgcccaccatgcaagcgagccattatttaattaaatgtcagcattgta
tgacctcactttttgtataagggtgtctgggaaagggtggtgggtccagc
ctctttttattttccatattttcacaaaatctcttgagatgtttttgctt
gttatctagcctgactaggatgtcagtaactcttcaggctacatttgaac
tctagatctacatgtgtcagcctcttgagtacaagtccaatggtagaaga
tgtaccctgtatgtgtcctgttttgtcaacatacttttaacaatgttaat
gttataatgcttaagagaagagaaagtaagtaacattaaatacctcatgt
atataaccaaagtagtactttcatctatatggaagataagtaataagcag
ataataaaaaaatcaactatatatctcataacatagcttgatggattatg
tatatataactgggcatttcatgctccttcatgtctctatttgtttttat
tagtctctatttgacacttcattttgaagtactgcttcctaaaggaattg
tctggaaatgacaaataagtaactatgctgagatttgtttttacaaacat
ttctggagagagagacagagagagtgagagagagagagagagagagagag
agagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50327511_50328524
seq2: B6Ng01-342O05.g_67_1077

seq1  GAATTCAAATAAGAGAAAATCCTATTTATGAAAGCAATTTAGGAAAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAAGAGAAAATCCTATTTATGAAAGCAATTTAGGAAAGATT  50

seq1  TTTGACACCACAGTTGTCTCTAATTTCAAGAAAGTAATATTTTTTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACACCACAGTTGTCTCTAATTTCAAGAAAGTAATATTTTTTTCTTT  100

seq1  CACCTCTTTTTCATCAGAGCCTTGAAGCAAGTAAACTATTTACCATATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTTTTTCATCAGAGCCTTGAAGCAAGTAAACTATTTACCATATTT  150

seq1  AGTCAAGACTGATGGAAGAAATCACTAAAATGTGGTTTCTATTTTGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGACTGATGGAAGAAATCACTAAAATGTGGTTTCTATTTTGAAAC  200

seq1  ATTTGGAGTATAAAGTGTGCTTTATGTGTGGTAAATTCATTTAGTGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAGTATAAAGTGTGCTTTATGTGTGGTAAATTCATTTAGTGAATG  250

seq1  TTATTTTGTGGTTCATGGATTCCTTCTGTGGCTCTTTTATCATTTTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGTGGTTCATGGATTCCTTCTGTGGCTCTTTTATCATTTTCTAT  300

seq1  TGTGCTGTCATTTGATGATAGGTATTGATCTGCTGAAATGTATAGAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGTCATTTGATGATAGGTATTGATCTGCTGAAATGTATAGAATGA  350

seq1  AATGCCCACCATGCAAGCGAGCCATTATTTAATTAAATGTCAGCATTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCCACCATGCAAGCGAGCCATTATTTAATTAAATGTCAGCATTGTA  400

seq1  TGACCTCACTTTTTGTATAAGGGTGTCTGGGAAAGGGTGGTGGGTCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCACTTTTTGTATAAGGGTGTCTGGGAAAGGGTGGTGGGTCCAGC  450

seq1  CTCTTTTTATTTTCCATATTTTCACAAAATCTCTTGAGATGTTTTTGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTATTTTCCATATTTTCACAAAATCTCTTGAGATGTTTTTGCTT  500

seq1  GTTATCTAGCCTGACTAGGATGTCAGTAACTCTTCAGGCTACATTTGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTAGCCTGACTAGGATGTCAGTAACTCTTCAGGCTACATTTGAAC  550

seq1  TCTAGATCTACATGTGTCAGCCTCTTGAGTACAAGTCCAATGGTAGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATCTACATGTGTCAGCCTCTTGAGTACAAGTCCAATGGTAGAAGA  600

seq1  TGTACCCTGTATGTGTCCTGTTTTGTCAACATACTTTTAACAATGTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCCTGTATGTGTCCTGTTTTGTCAACATACTTTTAACAATGTTAAT  650

seq1  GTTATAATGCTTAAGAGAAGAGAAAGTAAGTAACATTAAATACCTCATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAATGCTTAAGAGAAGAGAAAGTAAGTAACATTAAATACCTCATGT  700

seq1  ATATAACCAAAGTAGTACTTTCATCTATATGGAAGATAAGTAATAAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACCAAAGTAGTACTTTCATCTATATGGAAGATAAGTAATAAGCAG  750

seq1  ATAATAAAAAAATCAACTATATATCTCATAACATAGCTTGATGGATTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAAAAAATCAACTATATATCTCATAACATAGCTTGATGGATTATG  800

seq1  TATATATAACTGGGCATTTCATGCTCCTTCATGTCTCTATTTGTTTTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAACTGGGCATTTCATGCTCCTTCATGTCTCTATTTGTTTTTAT  850

seq1  TAGTCTCTATTTGACACTTCATTTTGAAGTACTGCTTCCTAAAGGAATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCTATTTGACACTTCATTTTGAAGTACTGCTTCCTAAAGGAATTG  900

seq1  TCTGGAAATGACAAATAAGGTAACTATGCTGAGATTTGTTTTTTAACAAA  950
      |||||||||||||||||| ||||||||||||||||||||||||  |||||
seq2  TCTGGAAATGACAAATAA-GTAACTATGCTGAGATTTGTTTTT--ACAAA  947

seq1  CATTTCTGGAGAGAGAGACAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGGAGAGAGAGACAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGA  997

seq1  GAGAGAGAGAGAGA  1014
      ||||||||||||||
seq2  GAGAGAGAGAGAGA  1011