BAC Information

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BAC

Clone NameB6Ng01-343K23
Chromosome7 (Build37)
Map Location 117,581,350 - 117,701,034
singlet/doubletdoublet
Overlap geneSbf2
Upstream geneStk33, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7, AA474408, Zfp143, Wee1, Swap70, EG668368, LOC668246
Downstream geneAdm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658, LOC384658, Galntl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343K23.bB6Ng01-343K23.g
ACCGA126401GA126402
length7881,180
definitionB6Ng01-343K23.b B6Ng01-343K23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,700,247 - 117,701,034)(117,581,350 - 117,582,540)
sequence
gaattcagttgtaattgaatcagtatgtgggttctaggagttgtacttag
gtcctatgcaaaaggagccagtgctccgtaaccactgtgctctctctagt
ccctgaattgattctttcctcattagcatggtttagaaatgtccattagg
acaaaacatgttgaacagaaacaggttgagaatgttgttttcttactgta
gctgaggtaatgatgacttttaagctcaccctgtaataaagaaccatgct
ttggtagtgggtagaaaggagaggtttacattttgactttgaaaatgggg
aaggatgtgagtaaccaaggacagtaacttcttggagtgccccttgcatt
tcttcctcttctgtcccatatgcttcctcaagtggtcttactatttgaat
aaccaggcatttgtactacaaatgttttagactgtttgagcatccctttt
agtgttgactaaaaggggaaattttggggtcttgatcaaatttcctctga
atttatgtctttgttcacatgaaaatatagatgtatagattgctgccttt
ttgcagtgtgaatgatgaaaccttcacaagtttctagagcaacatatatt
ggtaggccaaagagattgtggattggggtagagagtttgctaggaccaag
aaggatacttttatattttataaatcaaggggacagataaatatgtgata
catctggtatttttttctagcagtaagggagagacaaattgattttacta
tttagtaaatggattgtgtgtgtgtgtatgtgtgtgtg
gaattctctctctcaaaggaaggtccaaccacaaatgtagaacttgagca
taactgagtggaatacggggaacaccttggaagtatagtggatacagagc
atgcacaaggctctgggtttagtcctcaacacatgcacaaatgcatttac
atacaagcaaagaaaataattcagtaatatgtaataaggtatttagtatt
tctgcttttaacttactggtcctcagatttcaaatgaatgtgacaaagca
gtgactaatgtctcactgttaggtcattggccttgtcaaagagctagatt
aaacaatacccattggggccagggcactaatatcaagttcttcttcactc
taattccttaaaacaacttccctctgtttttcttcagaggtgccacattc
cccacttgatttatgtttaacagaggaaccacaaccgtctcaagaaggag
tggccagcactcacttagcacagaaccactattccttaagcatgtagcct
ccctgccagcctaagaattcaggtggttagttcatttcatcctgatcttt
aaattacaacacttcttctgtccagagtgcattttcatcttttgagcttc
tgtggttcacttgccggttttctttccttcttccagcttagttcattacc
tcattaattcaaaacaacagagcttagacgacaggcatgaagagctcaga
tgaactctgctgaagcagagcacaccctccgtgctaagtacttctgatta
ccactgtatttaaactttctctattaaacatgacacccagaagaaaactc
acgatgaggacaaaagattcatggagaaaaaatgtggccaagacattttc
atgatatagtgactgattctgacacacagaagcaagtgtgacatcttggg
actgattatcgagagcataggtattactgctagaatcctggagcgtctca
gttctgaaaatgaaatgcttcattaatccttttaatagactaatgacact
tacgtttttgatagctgctcagcaagttctctgatgtgctttatcatctt
cagtggattctttttcttcaactttaattctttctacttcaagctaccaa
cttgggaaaaagaatcgatgcatatcagtacctaaaatggctgaataaac
ctgcatttcatacaaatgccaaagttagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117700247_117701034
seq2: B6Ng01-343K23.b_45_832 (reverse)

seq1  CACACACACATACACACACACACAATCCATTTACTAAATAGTAAAATCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATACACACACACACAATCCATTTACTAAATAGTAAAATCAA  50

seq1  TTTGTCTCTCCCTTACTGCTAGAAAAAAATACCAGATGTATCACATATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCTCCCTTACTGCTAGAAAAAAATACCAGATGTATCACATATTT  100

seq1  ATCTGTCCCCTTGATTTATAAAATATAAAAGTATCCTTCTTGGTCCTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCCCCTTGATTTATAAAATATAAAAGTATCCTTCTTGGTCCTAGC  150

seq1  AAACTCTCTACCCCAATCCACAATCTCTTTGGCCTACCAATATATGTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTCTACCCCAATCCACAATCTCTTTGGCCTACCAATATATGTTGC  200

seq1  TCTAGAAACTTGTGAAGGTTTCATCATTCACACTGCAAAAAGGCAGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAACTTGTGAAGGTTTCATCATTCACACTGCAAAAAGGCAGCAAT  250

seq1  CTATACATCTATATTTTCATGTGAACAAAGACATAAATTCAGAGGAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACATCTATATTTTCATGTGAACAAAGACATAAATTCAGAGGAAATT  300

seq1  TGATCAAGACCCCAAAATTTCCCCTTTTAGTCAACACTAAAAGGGATGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAAGACCCCAAAATTTCCCCTTTTAGTCAACACTAAAAGGGATGCT  350

seq1  CAAACAGTCTAAAACATTTGTAGTACAAATGCCTGGTTATTCAAATAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTCTAAAACATTTGTAGTACAAATGCCTGGTTATTCAAATAGTA  400

seq1  AGACCACTTGAGGAAGCATATGGGACAGAAGAGGAAGAAATGCAAGGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACTTGAGGAAGCATATGGGACAGAAGAGGAAGAAATGCAAGGGGC  450

seq1  ACTCCAAGAAGTTACTGTCCTTGGTTACTCACATCCTTCCCCATTTTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAAGAAGTTACTGTCCTTGGTTACTCACATCCTTCCCCATTTTCAA  500

seq1  AGTCAAAATGTAAACCTCTCCTTTCTACCCACTACCAAAGCATGGTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAATGTAAACCTCTCCTTTCTACCCACTACCAAAGCATGGTTCTT  550

seq1  TATTACAGGGTGAGCTTAAAAGTCATCATTACCTCAGCTACAGTAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAGGGTGAGCTTAAAAGTCATCATTACCTCAGCTACAGTAAGAAA  600

seq1  ACAACATTCTCAACCTGTTTCTGTTCAACATGTTTTGTCCTAATGGACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTCTCAACCTGTTTCTGTTCAACATGTTTTGTCCTAATGGACAT  650

seq1  TTCTAAACCATGCTAATGAGGAAAGAATCAATTCAGGGACTAGAGAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAACCATGCTAATGAGGAAAGAATCAATTCAGGGACTAGAGAGAGC  700

seq1  ACAGTGGTTACGGAGCACTGGCTCCTTTTGCATAGGACCTAAGTACAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGTTACGGAGCACTGGCTCCTTTTGCATAGGACCTAAGTACAACT  750

seq1  CCTAGAACCCACATACTGATTCAATTACAACTGAATTC  788
      ||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAACCCACATACTGATTCAATTACAACTGAATTC  788

seq1: chr7_117581350_117582540
seq2: B6Ng01-343K23.g_64_1243

seq1  GAATTCTCTCTCTCAAAGGAAGGTCCAACCACAAATGTAGAACTTGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTCAAAGGAAGGTCCAACCACAAATGTAGAACTTGAGCA  50

seq1  TAACTGAGTGGAATACGGGGAACACCTTGGAAGTATAGTGGATACAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAGTGGAATACGGGGAACACCTTGGAAGTATAGTGGATACAGAGC  100

seq1  ATGCACAAGGCTCTGGGTTTAGTCCTCAACACATGCACAAATGCATTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAAGGCTCTGGGTTTAGTCCTCAACACATGCACAAATGCATTTAC  150

seq1  ATACAAGCAAAGAAAATAATTCAGTAATATGTAATAAGGTATTTAGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGCAAAGAAAATAATTCAGTAATATGTAATAAGGTATTTAGTATT  200

seq1  TCTGCTTTTAACTTACTGGTCCTCAGATTTCAAATGAATGTGACAAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTTAACTTACTGGTCCTCAGATTTCAAATGAATGTGACAAAGCA  250

seq1  GTGACTAATGTCTCACTGTTAGGTCATTGGCCTTGTCAAAGAGCTAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTAATGTCTCACTGTTAGGTCATTGGCCTTGTCAAAGAGCTAGATT  300

seq1  AAACAATACCCATTGGGGCCAGGGCACTAATATCAAGTTCTTCTTCACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATACCCATTGGGGCCAGGGCACTAATATCAAGTTCTTCTTCACTC  350

seq1  TAATTCCTTAAAACAACTTCCCTCTGTTTTTCTTCAGAGGTGCCACATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCTTAAAACAACTTCCCTCTGTTTTTCTTCAGAGGTGCCACATTC  400

seq1  CCCACTTGATTTATGTTTAACAGAGGAACCACAACCGTCTCAAGAAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTGATTTATGTTTAACAGAGGAACCACAACCGTCTCAAGAAGGAG  450

seq1  TGGCCAGCACTCACTTAGCACAGAACCACTATTCCTTAAGCATGTAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGCACTCACTTAGCACAGAACCACTATTCCTTAAGCATGTAGCCT  500

seq1  CCCTGCCAGCCTAAGAATTCAGGTGGTTAGTTCATTTCATCCTGATCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCAGCCTAAGAATTCAGGTGGTTAGTTCATTTCATCCTGATCTTT  550

seq1  AAATTACAACACTTCTTCTGTCCAGAGTGCATTTTCATCTTTTGAGCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACAACACTTCTTCTGTCCAGAGTGCATTTTCATCTTTTGAGCTTC  600

seq1  TGTGGTTCACTTGCCGGTTTTCTTTCCTTCTTCCAGCTTAGTTCATTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTCACTTGCCGGTTTTCTTTCCTTCTTCCAGCTTAGTTCATTACC  650

seq1  TCATTAATTCAAAACAACAGAGCTTAGACGACAGGCATGAAGAGCTCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATTCAAAACAACAGAGCTTAGACGACAGGCATGAAGAGCTCAGA  700

seq1  TGAACTCTGCTGAAGCAGAGCACACCCTCCGTGCTAAGTACTTCTGATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCTGCTGAAGCAGAGCACACCCTCCGTGCTAAGTACTTCTGATTA  750

seq1  CCACTGTATTTAAACTTTCTCTATTAAACATGACACCCAGAAGAAAACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTATTTAAACTTTCTCTATTAAACATGACACCCAGAAGAAAACTC  800

seq1  ACGATGAGGACAAAAGATTCATGGAGAAAAAATGTGGCCAAGACATTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGAGGACAAAAGATTCATGGAGAAAAAATGTGGCCAAGACATTTTC  850

seq1  ATGATATAGTGACTGATTCTGACACACAGAAGCAAGTGTGACATCTTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATAGTGACTGATTCTGACACACAGAAGCAAGTGTGACATCTTGGG  900

seq1  ACTGATTATCGAGAGCATAGGTATTACTGCTAGAATCCTGGAGCGTCTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTATCGAGAGCATAGGTATTACTGCTAGAATCCTGGAGCGTCTCA  950

seq1  GTTCTGAAAATGAAATGCTTCATTAATCCTTTTAAATAGACTAATGACAC  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTTCTGAAAATGAAATGCTTCATTAATCCTTTT-AATAGACTAATGACAC  999

seq1  TTACGTTTTTGAATAGCTGCTCAGCAAGTTCTCTGATGTGCTTTATCATC  1050
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTACGTTTTTG-ATAGCTGCTCAGCAAGTTCTCTGATGTGCTTTATCATC  1048

seq1  TTCAGTGGATTC-TTTTCTTCAACTTTAATTCTTTCTACTTCAAAAGCTA  1099
      |||||||||||| |||||||||||||||||||||||||||||  ||||||
seq2  TTCAGTGGATTCTTTTTCTTCAACTTTAATTCTTTCTACTTC--AAGCTA  1096

seq1  CCAACTT-GGAAAAAGAATCAGATGGCAATAATCAGTACCTAAATATGCT  1148
      ||||||| |||||||||||| ||| |||   |||||||||||||   |||
seq2  CCAACTTGGGAAAAAGAATC-GAT-GCA--TATCAGTACCTAAAATGGCT  1142

seq1  GAATTTAAAAACTGGCATTTTCATACAAAATGCAAAGTAAGAG  1191
      ||||    ||||  ||| |||||||||||   |||||| ||||
seq2  GAAT----AAACCTGCA-TTTCATACAAATGCCAAAGTTAGAG  1180