BAC Information

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BAC

Clone NameB6Ng01-344D11
Chromosome7 (Build37)
Map Location 99,273,761 - 99,274,943
singlet/doubletsinglet
Overlap geneDlg2
Upstream genenone
Downstream geneCcdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344D11.bB6Ng01-344D11.g
ACCGA126771GA126772
length1,1691,152
definitionB6Ng01-344D11.b B6Ng01-344D11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatttcttattcaggtgtttcttatttcatcaagtttcatag
tcatgattactatttgaaagcagggccatgaaatttcatcttgtgtttgt
ggcacagcctggctaggttggcaatattttgtctatccctgtccacaaga
gttttagtgtgtgtactgctatgttcccatgggtttcctggatttctagg
gcagattggctttaaaactagaggggaaaatgataatggagagagacaca
tgtaatgccaacagacaagtatgtgccgacagattcatatattcagacgc
tgttctggggagactgtatggaatggacctggctagctgccagattcctc
tctttgggtaagtgcctaatcctgtcatatggagcttggtgagacagcct
tgagccctgttccaaaataaacccaactgccccacttctcatgcacaatt
ccataatgaattctgacaaaacgaaatgaagagtgcctggagtttatttt
gctgtcactaactcccactttggagcccatataccagaagggaagcagag
tatctataaaacaagccctgacctcagcctggaagaatcagatcagcagc
aagtcaagcccaatgagaagcaaaagctaaagtctttctccaatcaacag
tgtcaataagtcatcaggaaacaattgccaaaggttctgtgtctcgttga
gaggagaaacagtgggcgaggctcaaacaagaagctcttctgatggaagt
gaacatactgagtctagttttctaaccaatgcagatggtacccccaccct
gcatccctttgttcacagggcaggatgctatgcccaagagaagacttcaa
agttgatccacgtagctacatgttcaacacatttccttgttttggctttg
ggaaactttaacaattctgagtagttagattcaggcatggattactactt
tgcttccctagctggcttgcctcatctgtaatcttcaagttgatggcatt
tctcctcagaatactctgtaaaatatcctcaatgatatctggggtttctt
ttgcctctctctggtttttaatcggtgagcttcttttcaaacattgactt
atgcattaggttgggaagtcactgtgctaggcctactgtaccacatagat
agataagtgacagtcctat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggtttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacataatactatcggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgtatacactagcaagattttatcgaaa
ggacccagatgtagttgtctcttgtgagactatgccagggcctagcaaac
acagaactggatgcccacagtcagctaatggatggatcacagggctccca
atggagagctagagaaagtacccaagagctaaagggatctgcaaccctat
aggtgatcacattttgactacagtacccgagctcttgactctagctgcat
atgtatcaaagatgcctagtcgcatcactgaaaagagagccattgacacg
ctaactttatatgccagtacggacgccaggcaaaggatggcggtatgtag
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_99273761_99274943
seq2: B6Ng01-344D11.b_46_1214 (reverse)

seq1  ATAGGACTGTCACTTATCTATCTAATGGTTGGTACAGTAGGCCTAGCACA  50
      ||||||||||||||||||||||| |||  |||||||||||||||||||||
seq2  ATAGGACTGTCACTTATCTATCT-ATG--TGGTACAGTAGGCCTAGCACA  47

seq1  GTGGACTTCCCAAAACTAATGCAT-AGTCAAATGTTTGAAAAAGAAAGCT  99
      || |||||||| || ||||||||| |||| ||||||||||||   |||||
seq2  GT-GACTTCCC-AACCTAATGCATAAGTC-AATGTTTGAAAA--GAAGCT  92

seq1  CACCCGAATAAAAAACCAGAGGAGAGGCAAAAGAAACCCCAGATATCAAT  149
      ||||   || |||||||||| ||||||||||||||||||||||||||| |
seq2  CACC--GATTAAAAACCAGA-GAGAGGCAAAAGAAACCCCAGATATCATT  139

seq1  GAGGATATTTTTAACAGAGTTATTCTGAGGGAGAAATGCCATCAACTTGA  199
      |||||||||||  |||||| |||||||| |||||||||||||||||||||
seq2  GAGGATATTTT--ACAGAG-TATTCTGA-GGAGAAATGCCATCAACTTGA  185

seq1  AGATTACAGATGAGGCAAGCCAGCTAGGGAAGCAAAGTAGTAATCCATGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACAGATGAGGCAAGCCAGCTAGGGAAGCAAAGTAGTAATCCATGC  235

seq1  CTGAATCTAACTACTCAGAATTGTTAAAGTTTCCCAAAGCCAAAACAAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCTAACTACTCAGAATTGTTAAAGTTTCCCAAAGCCAAAACAAGG  285

seq1  AAATGTGTTGAACATGTAGCTACGTGGATCAACTTTGAAGTCTTCTCTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTTGAACATGTAGCTACGTGGATCAACTTTGAAGTCTTCTCTTG  335

seq1  GGCATAGCATCCTGCCCTGTGAACAAAGGGATGCAGGGTGGGGGTACCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGCATCCTGCCCTGTGAACAAAGGGATGCAGGGTGGGGGTACCAT  385

seq1  CTGCATTGGTTAGAAAACTAGACTCAGTATGTTCACTTCCATCAGAAGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTGGTTAGAAAACTAGACTCAGTATGTTCACTTCCATCAGAAGAG  435

seq1  CTTCTTGTTTGAGCCTCGCCCACTGTTTCTCCTCTCAACGAGACACAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGTTTGAGCCTCGCCCACTGTTTCTCCTCTCAACGAGACACAGAA  485

seq1  CCTTTGGCAATTGTTTCCTGATGACTTATTGACACTGTTGATTGGAGAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGCAATTGTTTCCTGATGACTTATTGACACTGTTGATTGGAGAAA  535

seq1  GACTTTAGCTTTTGCTTCTCATTGGGCTTGACTTGCTGCTGATCTGATTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTAGCTTTTGCTTCTCATTGGGCTTGACTTGCTGCTGATCTGATTC  585

seq1  TTCCAGGCTGAGGTCAGGGCTTGTTTTATAGATACTCTGCTTCCCTTCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGCTGAGGTCAGGGCTTGTTTTATAGATACTCTGCTTCCCTTCTG  635

seq1  GTATATGGGCTCCAAAGTGGGAGTTAGTGACAGCAAAATAAACTCCAGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGGGCTCCAAAGTGGGAGTTAGTGACAGCAAAATAAACTCCAGGC  685

seq1  ACTCTTCATTTCGTTTTGTCAGAATTCATTATGGAATTGTGCATGAGAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCATTTCGTTTTGTCAGAATTCATTATGGAATTGTGCATGAGAAG  735

seq1  TGGGGCAGTTGGGTTTATTTTGGAACAGGGCTCAAGGCTGTCTCACCAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCAGTTGGGTTTATTTTGGAACAGGGCTCAAGGCTGTCTCACCAAG  785

seq1  CTCCATATGACAGGATTAGGCACTTACCCAAAGAGAGGAATCTGGCAGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATATGACAGGATTAGGCACTTACCCAAAGAGAGGAATCTGGCAGCT  835

seq1  AGCCAGGTCCATTCCATACAGTCTCCCCAGAACAGCGTCTGAATATATGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGTCCATTCCATACAGTCTCCCCAGAACAGCGTCTGAATATATGA  885

seq1  ATCTGTCGGCACATACTTGTCTGTTGGCATTACATGTGTCTCTCTCCATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCGGCACATACTTGTCTGTTGGCATTACATGTGTCTCTCTCCATT  935

seq1  ATCATTTTCCCCTCTAGTTTTAAAGCCAATCTGCCCTAGAAATCCAGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTCCCCTCTAGTTTTAAAGCCAATCTGCCCTAGAAATCCAGGAA  985

seq1  ACCCATGGGAACATAGCAGTACACACACTAAAACTCTTGTGGACAGGGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGGGAACATAGCAGTACACACACTAAAACTCTTGTGGACAGGGAT  1035

seq1  AGACAAAATATTGCCAACCTAGCCAGGCTGTGCCACAAACACAAGATGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAATATTGCCAACCTAGCCAGGCTGTGCCACAAACACAAGATGAA  1085

seq1  ATTTCATGGCCCTGCTTTCAAATAGTAATCATGACTATGAAACTTGATGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGGCCCTGCTTTCAAATAGTAATCATGACTATGAAACTTGATGA  1135

seq1  AATAAGAAACACCTGAATAAGAAATGAAGAATTC  1183
      ||||||||||||||||||||||||||||||||||
seq2  AATAAGAAACACCTGAATAAGAAATGAAGAATTC  1169