BAC Information

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BAC

Clone NameB6Ng01-344F09
Chromosome7 (Build37)
Map Location 149,954,194 - 150,104,025
singlet/doubletdoublet
Overlap geneEG624121, Th
Upstream geneMuc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264
Downstream geneAscl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344F09.bB6Ng01-344F09.g
ACCGA126851GA126852
length1,0081,156
definitionB6Ng01-344F09.b B6Ng01-344F09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,954,194 - 149,955,202)(150,102,869 - 150,104,025)
sequence
gaattccttaagttcctgtgtgaacctgtagaaagttttaggccacagtg
agaatgtggggaagtcctaaggctccaaagagattttgaagaaggcatta
gatccagtgtgaatgtggaggaggccttcagtctgagtatctctagaact
gtggttctcaaccttcctaattctgctaccctttaatacacttcttcatg
gtgtagtgacacccaaccataaaattattttcattgttacttcataacta
taattttgctactgttatgaatcataatatagatatctatattttcagat
gtcttttgtgagttgctacccacagattgagaactgctgctgtaaaaggt
attagattccagtgataacatggagaaggctgtcagacctcgtgaaaaac
tatggaagaccttacagaatatgtgagaagttgagaaaatttgaggcccc
agtgagacattggatattgcctgagtctcctgtgaaaacctgtagaacat
tttaggccatggcgagaacctggggaaagcccaagtcctcaatgatactt
tttagaaggtattatatcccagcgtgaacctggagaaggccttcaagcat
agtgagaagctatagaaggcataggatccagtgagaacatggggaaatcc
ttcaaatactggataaaaaaaaacagacaaagaccttatataacctgtga
gaactaagttttaggccccagtgagaccttgaataatgcattaggctgta
ccaagtacttgtatgtggaaaggatttaaggtccactgaaaacctgggaa
agccttagataccagtcataatctaggatagtttcttagggcccagttag
cgcttgtagaaagatttagtcccccttgaaaacctgtggaaggcttaaac
ctcaataagactttgaggaaggcattagttcacagaatatggaaaggcct
tatgccttagtgagaacctccagaaagttttagttagagtgagaacatgg
gggggggg
gaattcctagaacccatgtaaagctgggcacagaagtgtcaggtgtgtgt
atgtgtgtgtgtatgtgtgtatgtgtttacgtgcatgtgcgtgtaaaacc
ttggccactctggagcttggtgcctcctgaaactcagacccagttgatgg
caactgtccaatctaaagggtcatttatgaagtgtaactctgctttgtga
ggaaggcccttcagtgtgtgtgttccaggggtagggatatagagactgca
gactggatgcagcagctgtgtctcatctagcatgcagcttggcagccctt
gccttagaggatcagaacataggcgctatgtccctggcccaatgtcctcc
tcatttcatccctaagcgtggcttccaccttgaatctggcgtgtccactg
gtattgctgccttgtttgctggggcctctgagccctgtgtgttgttgtgg
gatgcttagagaccattttctcctccttgtgcttcctacgctttccgtgt
tcagatgagcaaaggttacttttataatcagattatttttttttcctagc
tacaaagctgttacttcaataataagtacaaagccgtagacatcctatcc
actgaatccaaaaggtcattgtgtgcctggtgacaaagtcagcagtcaaa
gaagtggggaagctaaatccctgtcctctttgtgccacaaacctctcccc
agacatacagagcctatgtgtcacctcaaagagcttagagacctccttac
taatgggtaggctacagctccttcccccctttccttctttcccttccttc
ccacttccatttccccatcctctcatctctccaaccctttttgcttatcc
tccctcccatccaccccttcattcaccccttttgctatctctccccctcc
atccaatcctaccctttccacccctctatcacttctttttaatttcctct
ctccctcaatcattcctctacccttccaatcccctttcatccattcctct
accaactcttctctccttccccatcctctctttatccatcccttttatcc
attgatccacatccatacctccctctatcctcttccttttccctccccat
ctcttctcctccctctcccatcctctgcttttgaacttctcctcgtctcc
ttcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149954194_149955202
seq2: B6Ng01-344F09.b_48_1055

seq1  GAATTCCTTAAGTTCCTGTGTGAACCTGTAGAAAGTTTTAGGCCACAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAGTTCCTGTGTGAACCTGTAGAAAGTTTTAGGCCACAGTG  50

seq1  AGAATGTGGGGAAGTCCTAAGGCTCCAAAGAGATTTTGAAGAAGGCATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGGGGAAGTCCTAAGGCTCCAAAGAGATTTTGAAGAAGGCATTA  100

seq1  GATCCAGTGTGAATGTGGAGGAGGCCTTCAGTCTGAGTATCTCTAGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGTGTGAATGTGGAGGAGGCCTTCAGTCTGAGTATCTCTAGAACT  150

seq1  GTGGTTCTCAACCTTCCTAATTCTGCTACCCTTTAATACACTTCTTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCTCAACCTTCCTAATTCTGCTACCCTTTAATACACTTCTTCATG  200

seq1  GTGTAGTGACACCCAACCATAAAATTATTTTCATTGTTACTTCATAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTGACACCCAACCATAAAATTATTTTCATTGTTACTTCATAACTA  250

seq1  TAATTTTGCTACTGTTATGAATCATAATATAGATATCTATATTTTCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTGCTACTGTTATGAATCATAATATAGATATCTATATTTTCAGAT  300

seq1  GTCTTTTGTGAGTTGCTACCCACAGATTGAGAACTGCTGCTGTAAAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGTGAGTTGCTACCCACAGATTGAGAACTGCTGCTGTAAAAGGT  350

seq1  ATTAGATTCCAGTGATAACATGGAGAAGGCTGTCAGACCTCGTGAAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATTCCAGTGATAACATGGAGAAGGCTGTCAGACCTCGTGAAAAAC  400

seq1  TATGGAAGACCTTACAGAATATGTGAGAAGTTGAGAAAATTTGAGGCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGACCTTACAGAATATGTGAGAAGTTGAGAAAATTTGAGGCCCC  450

seq1  AGTGAGACATTGGATATTGCCTGAGTCTCCTGTGAAAACCTGTAGAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGACATTGGATATTGCCTGAGTCTCCTGTGAAAACCTGTAGAACAT  500

seq1  TTTAGGCCATGGCGAGAACCTGGGGAAAGCCCAAGTCCTCAATGATACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCCATGGCGAGAACCTGGGGAAAGCCCAAGTCCTCAATGATACTT  550

seq1  TTTAGAAGGTATTATATCCCAGCGTGAACCTGGAGAAGGCCTTCAAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAGGTATTATATCCCAGCGTGAACCTGGAGAAGGCCTTCAAGCAT  600

seq1  AGTGAGAAGCTATAGAAGGCATAGGATCCAGTGAGAACATGGGGAAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAAGCTATAGAAGGCATAGGATCCAGTGAGAACATGGGGAAATCC  650

seq1  TTCAAATACTGGATAAAAAAAAACAGACAAAGACCTTATATAACCTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATACTGGATAAAAAAAAACAGACAAAGACCTTATATAACCTGTGA  700

seq1  GAACTAAGTTTTAGGCCCCAGTGAGACCTTGAATAATGCATTAGGCTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAGTTTTAGGCCCCAGTGAGACCTTGAATAATGCATTAGGCTGTA  750

seq1  CCAAGTACTTGTATGTGGAAAGGATTTAAGGTCCACTGAAAACCTGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTACTTGTATGTGGAAAGGATTTAAGGTCCACTGAAAACCTGGGAA  800

seq1  AGCCTTAGATACCAGTCATAATCTAGGATAG-TTCTTAGGGCCCAGTTAG  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGCCTTAGATACCAGTCATAATCTAGGATAGTTTCTTAGGGCCCAGTTAG  850

seq1  CGCTTGTAGAAAGATTTAGTCCCCCTTGAAAACCTGTGGAAGGCTTAAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTGTAGAAAGATTTAGTCCCCCTTGAAAACCTGTGGAAGGCTTAAAC  900

seq1  CTCAATAAGACTTTGAGGAAGGCATTAGTTCACAGAATATGGAAAAGGCC  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCAATAAGACTTTGAGGAAGGCATTAGTTCACAGAATATGG-AAAGGCC  949

seq1  TTATGCCTTAGTGAGAACCTCCAGAAAGTTTTAGGTTAGAGTGAGAACAT  999
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTATGCCTTAGTGAGAACCTCCAGAAAGTTTTA-GTTAGAGTGAGAACAT  998

seq1  GGGGGGGGGG  1009
      ||||||||||
seq2  GGGGGGGGGG  1008

seq1: chr7_150102869_150104025
seq2: B6Ng01-344F09.g_68_1223 (reverse)

seq1  GGGGAAGGAGAGAGGGAGAAGTTAAAAGAGAGAGGATGGGAGAGGGAGGG  50
      |||||||||||   ||||||||| |||   ||||||||||||||||||| 
seq2  GGGGAAGGAGACGAGGAGAAGTTCAAAAGCAGAGGATGGGAGAGGGAGG-  49

seq1  AGGAAGAGAGGGGGAGGGAAAAGGAAGAGGATAGAGGGAGGTATGGATGG  100
        ||||||| |||||||||||||||||||||||||||||||||||||| |
seq2  -AGAAGAGATGGGGAGGGAAAAGGAAGAGGATAGAGGGAGGTATGGAT-G  97

seq1  TGAATCAATGGATAAAA-GGATGGATAAAGGAGAGGATGGGGGAGGGAGA  149
      || |||||||||||||| ||||||||||| |||||||| ||||| |||||
seq2  TGGATCAATGGATAAAAGGGATGGATAAA-GAGAGGAT-GGGGAAGGAGA  145

seq1  GAGGAGTTGGTAGAGGAATGGATG-AAGGGGATTGGAAGGGTAGAGGAAA  198
      || ||||||||||||||||||||| |||||||||||||||||||||| ||
seq2  GAAGAGTTGGTAGAGGAATGGATGAAAGGGGATTGGAAGGGTAGAGG-AA  194

seq1  TGATTGAGGGAGAGAGGAAATAAAAAAGAAGTGATAGAGGGGTGGAAAGG  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGATTGAGGGAGAGAGGAAATTAAAAAGAAGTGATAGAGGGGTGGAAAGG  244

seq1  GTAGGAATGGATGGAGGGGGAGAGATAGCAAAAGGGGTGAATGAAGGGGT  298
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATTGGATGGAGGGGGAGAGATAGCAAAAGGGGTGAATGAAGGGGT  294

seq1  GGAT-GGAGGGAGGAT-AGC-AAAAGGGTTGGAGAGATGAGAGGATGGGG  345
      |||| ||||||||||| ||| |||||||||||||||||||||||||||||
seq2  GGATGGGAGGGAGGATAAGCAAAAAGGGTTGGAGAGATGAGAGGATGGGG  344

seq1  AAATGGAAGTGGGAAGGAAGGGAAAGAAGGAAAGGGGGGAAGGAGCTGTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAAGTGGGAAGGAAGGGAAAGAAGGAAAGGGGGGAAGGAGCTGTA  394

seq1  GCCTACCCATTAGTAAGGAGGTCTCTAAGCTCTTTGAGGTGACACATAGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACCCATTAGTAAGGAGGTCTCTAAGCTCTTTGAGGTGACACATAGG  444

seq1  CTCTGTATGTCTGGGGAGAGGTTTGTGGCACAAAGAGGACAGGGATTTAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATGTCTGGGGAGAGGTTTGTGGCACAAAGAGGACAGGGATTTAG  494

seq1  CTTCCCCACTTCTTTGACTGCTGACTTTGTCACCAGGCACACAATGACCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCACTTCTTTGACTGCTGACTTTGTCACCAGGCACACAATGACCT  544

seq1  TTTGGATTCAGTGGATAGGATGTCTACGGCTTTGTACTTATTATTGAAGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATTCAGTGGATAGGATGTCTACGGCTTTGTACTTATTATTGAAGT  594

seq1  AACAGCTTTGTAGCTAGGAAAAAAAAATAATCTGATTATAAAAGTAACCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTTTGTAGCTAGGAAAAAAAAATAATCTGATTATAAAAGTAACCT  644

seq1  TTGCTCATCTGAACACGGAAAGCGTAGGAAGCACAAGGAGGAGAAAATGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCATCTGAACACGGAAAGCGTAGGAAGCACAAGGAGGAGAAAATGG  694

seq1  TCTCTAAGCATCCCACAACAACACACAGGGCTCAGAGGCCCCAGCAAACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAAGCATCCCACAACAACACACAGGGCTCAGAGGCCCCAGCAAACA  744

seq1  AGGCAGCAATACCAGTGGACACGCCAGATTCAAGGTGGAAGCCACGCTTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCAATACCAGTGGACACGCCAGATTCAAGGTGGAAGCCACGCTTA  794

seq1  GGGATGAAATGAGGAGGACATTGGGCCAGGGACATAGCGCCTATGTTCTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAAATGAGGAGGACATTGGGCCAGGGACATAGCGCCTATGTTCTG  844

seq1  ATCCTCTAAGGCAAGGGCTGCCAAGCTGCATGCTAGATGAGACACAGCTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTAAGGCAAGGGCTGCCAAGCTGCATGCTAGATGAGACACAGCTG  894

seq1  CTGCATCCAGTCTGCAGTCTCTATATCCCTACCCCTGGAACACACACACT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCCAGTCTGCAGTCTCTATATCCCTACCCCTGGAACACACACACT  944

seq1  GAAGGGCCTTCCTCACAAAGCAGAGTTACACTTCATAAATGACCCTTTAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCCTTCCTCACAAAGCAGAGTTACACTTCATAAATGACCCTTTAG  994

seq1  ATTGGACAGTTGCCATCAACTGGGTCTGAGTTTCAGGAGGCACCAAGCTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACAGTTGCCATCAACTGGGTCTGAGTTTCAGGAGGCACCAAGCTC  1044

seq1  CAGAGTGGCCAAGGTTTTACACGCACATGCACGTAAACACATACACACAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGGCCAAGGTTTTACACGCACATGCACGTAAACACATACACACAT  1094

seq1  ACACACACACATACACACACCTGACACTTCTGTGCCCAGCTTTACATGGG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACATACACACACCTGACACTTCTGTGCCCAGCTTTACATGGG  1144

seq1  TTCTAGGAATTC  1157
      ||||||||||||
seq2  TTCTAGGAATTC  1156